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PXN (paxillin)

Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
5829
Gene nameGene Name - the full gene name approved by the HGNC.
Paxillin
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
PXN
SynonymsGene synonyms aliases
-
ChromosomeChromosome number
12
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
12q24.23
SummarySummary of gene provided in NCBI Entrez Gene.
This gene encodes a cytoskeletal protein involved in actin-membrane attachment at sites of cell adhesion to the extracellular matrix (focal adhesion). Alternatively spliced transcript variants encoding different isoforms have been described for this gene.
miRNAmiRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT007346 hsa-miR-137 Luciferase reporter assay, qRT-PCR, Western blot 23275153
MIRT007346 hsa-miR-137 Luciferase reporter assay, qRT-PCR, Western blot 23275153
MIRT007346 hsa-miR-137 Luciferase reporter assay, qRT-PCR, Western blot 23275153
MIRT018650 hsa-miR-335-5p Microarray 18185580
MIRT023030 hsa-miR-124-3p Microarray 18668037
Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0001725 Component Stress fiber IDA 24036928
GO:0003712 Function Transcription coregulator activity IBA 21873635
GO:0005515 Function Protein binding IPI 7561682, 9756887, 10604475, 10814581, 11035932, 12861019, 14665621, 14688263, 15572663, 16478788, 16628223, 17082770, 20489202, 21034468, 21173240, 21741599, 22270917, 22728435, 23393263, 23397142, 24694988, 24863063, 25241761, 31980649
GO:0005829 Component Cytosol IBA 21873635
GO:0005829 Component Cytosol IDA
Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM
HGNC
e!Ensembl
Protein
UniProt ID P49023
Protein name Paxillin
Protein function Cytoskeletal protein involved in actin-membrane attachment at sites of cell adhesion to the extracellular matrix (focal adhesion). Recruits other proteins such as TRIM15 to focal adhesion.
PDB 1OW6 , 1OW7 , 1OW8 , 2K2R , 2O9V , 2VZD , 2VZG , 2VZI , 3GM1 , 3PY7 , 3RQE , 3RQF , 3RQG , 3U3F , 4EDN , 4R32 , 4XGZ , 4XH2 , 5UWH , 6IUI , 6PW8 , 6U4M , 6U4N , 7QB0
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF03535 Paxillin
44 253
Family
PF00412 LIM
358 413
LIM domain
Domain
PF00412 LIM
417 472
LIM domain
Domain
PF00412 LIM
476 531
LIM domain
Domain
PF00412 LIM
535 590
LIM domain
Domain
Sequence
Sequence length 591
Interactions View interactions
PathwaysPathway information has different metabolic/signaling pathways associated with genes. Each record is hyperlinked to a complete information page which also includes links to the KEGG/Reactome pathway database.
 
KEGG
 
Reactome
  Chemokine signaling pathway
VEGF signaling pathway
Focal adhesion
Leukocyte transendothelial migration
Regulation of actin cytoskeleton
Bacterial invasion of epithelial cells
Shigellosis
Yersinia infection
Human cytomegalovirus infection
Human papillomavirus infection
Human immunodeficiency virus 1 infection
Viral carcinogenesis
Proteoglycans in cancer
  GAB1 signalosome
VEGFA-VEGFR2 Pathway
Smooth Muscle Contraction
Localization of the PINCH-ILK-PARVIN complex to focal adhesions
Regulation of cytoskeletal remodeling and cell spreading by IPP complex components
PTK6 Regulates RHO GTPases, RAS GTPase and MAP kinases
Associated diseases
Causal
Disease name Disease term dbSNP ID References
Lung carcinoma Non-Small Cell Lung Carcinoma rs1805076, rs121909071, rs121913530, rs112445441, rs121913529, rs121913535, rs121913297, rs121913279, rs104886003, rs397516975, rs11554290, rs121913364, rs121913351, rs121913369, rs121913355, rs121912470, rs121913273, rs121913281, rs121913348, rs727503093, rs121913353, rs397516890, rs397516896, rs121913378, rs397516897, rs397516977, rs397516978, rs397516979, rs397516980, rs397516981, rs397516982, rs121913240, rs17851045, rs397517086, rs121913428, rs397517094, rs397517098, rs397517106, rs121913465, rs397517108, rs397517111, rs397517112, rs397517114, rs397517116, rs1554350366, rs397517127, rs397517200, rs397517202, rs121913283, rs121913370, rs121913357, rs727503106, rs121913238, rs727503108, rs397517040, rs397516976, rs1555618025, rs1057519729, rs1584238193 21159652

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