PTPRF (protein tyrosine phosphatase receptor type F)

Gene

• Entrez ID: 5792
• Gene name: Protein tyrosine phosphatase receptor type F
• Gene symbol: PTPRF
• Synonyms: BNAH2, LAR
• Chromosome: 1
• Chromosome location: 1p34.2
• Summary: The protein encoded by this gene is a member of the protein tyrosine phosphatase (PTP) family. PTPs are known to be signaling molecules that regulate a variety of cellular processes including cell growth, differentiation, mitotic cycle, and oncogenic tran

SNPs

SNP ID	Visualize variation	Clinical significance	Consequence
rs1131692054	TG>-	Pathogenic	Intron variant, coding sequence variant, frameshift variant

miRNA

miRTarBase ID	miRNA	Experiments	Reference
MIRT001340	hsa-miR-1-3p	pSILAC	18668040
MIRT001340	hsa-miR-1-3p	Proteomics;Other	18668040
MIRT035527	hsa-miR-24-3p	Luciferase reporter assay	23418360
MIRT035527	hsa-miR-24-3p	Luciferase reporter assay	23418360
MIRT046964	hsa-miR-221-3p	CLASH	23622248
MIRT038659	hsa-miR-15b-3p	CLASH	23622248
MIRT037821	hsa-miR-455-3p	CLASH	23622248
MIRT037603	hsa-miR-744-5p	CLASH	23622248
MIRT036277	hsa-miR-1229-3p	CLASH	23622248
MIRT035797	hsa-miR-1914-5p	CLASH	23622248
MIRT052751	hsa-miR-1260b	CLASH	23622248
MIRT717394	hsa-miR-646	HITS-CLIP	19536157
MIRT469952	hsa-miR-6858-3p	HITS-CLIP	19536157
MIRT717393	hsa-miR-4691-3p	HITS-CLIP	19536157
MIRT717392	hsa-miR-6736-3p	HITS-CLIP	19536157
MIRT717391	hsa-miR-4530	HITS-CLIP	19536157
MIRT717390	hsa-miR-6803-3p	HITS-CLIP	19536157
MIRT717388	hsa-miR-4655-3p	HITS-CLIP	19536157
MIRT717389	hsa-miR-4469	HITS-CLIP	19536157
MIRT717387	hsa-miR-4660	HITS-CLIP	19536157
MIRT717386	hsa-miR-7106-3p	HITS-CLIP	19536157
MIRT717385	hsa-miR-3157-5p	HITS-CLIP	19536157
MIRT717384	hsa-miR-425-3p	HITS-CLIP	19536157
MIRT469970	hsa-miR-302f	HITS-CLIP	23313552
MIRT469966	hsa-miR-4532	HITS-CLIP	23313552
MIRT469965	hsa-miR-219b-3p	HITS-CLIP	23313552
MIRT469964	hsa-miR-4537	HITS-CLIP	23313552
MIRT469963	hsa-miR-377-5p	HITS-CLIP	23313552
MIRT469962	hsa-miR-6086	HITS-CLIP	23313552
MIRT469960	hsa-miR-2467-3p	HITS-CLIP	23313552
MIRT469959	hsa-miR-6499-3p	HITS-CLIP	23313552
MIRT469958	hsa-miR-486-3p	HITS-CLIP	23313552
MIRT469957	hsa-miR-328-5p	HITS-CLIP	23313552
MIRT469956	hsa-miR-6885-5p	HITS-CLIP	23313552
MIRT037821	hsa-miR-455-3p	HITS-CLIP	23313552
MIRT469955	hsa-miR-1273e	HITS-CLIP	23313552
MIRT469954	hsa-miR-6516-5p	HITS-CLIP	23313552
MIRT700493	hsa-miR-6771-3p	HITS-CLIP	23313552
MIRT700492	hsa-miR-619-3p	HITS-CLIP	23313552
MIRT700491	hsa-miR-7851-3p	HITS-CLIP	23313552
MIRT700490	hsa-miR-340-3p	HITS-CLIP	23313552
MIRT700489	hsa-miR-6827-3p	HITS-CLIP	23313552
MIRT700488	hsa-miR-939-3p	HITS-CLIP	23313552
MIRT700487	hsa-miR-4486	HITS-CLIP	23313552
MIRT700486	hsa-miR-585-3p	HITS-CLIP	23313552
MIRT700485	hsa-miR-1268a	HITS-CLIP	23313552
MIRT700484	hsa-miR-1268b	HITS-CLIP	23313552
MIRT700483	hsa-miR-4684-5p	HITS-CLIP	23313552
MIRT645719	hsa-miR-4677-3p	HITS-CLIP	23824327
MIRT645718	hsa-miR-4679	HITS-CLIP	23824327
MIRT645717	hsa-miR-2115-5p	HITS-CLIP	23824327
MIRT645716	hsa-miR-4504	HITS-CLIP	23824327
MIRT645715	hsa-miR-542-3p	HITS-CLIP	23824327
MIRT645714	hsa-let-7c-3p	HITS-CLIP	23824327
MIRT645713	hsa-let-7a-2-3p	HITS-CLIP	23824327
MIRT645712	hsa-let-7g-3p	HITS-CLIP	23824327
MIRT645711	hsa-miR-493-5p	HITS-CLIP	23824327
MIRT569285	hsa-miR-4787-5p	PAR-CLIP	20371350
MIRT569284	hsa-miR-658	PAR-CLIP	20371350
MIRT569283	hsa-miR-25-5p	PAR-CLIP	20371350
MIRT569282	hsa-miR-6752-5p	PAR-CLIP	20371350
MIRT569280	hsa-miR-6842-5p	PAR-CLIP	20371350
MIRT569281	hsa-miR-7110-5p	PAR-CLIP	20371350
MIRT569279	hsa-miR-4651	PAR-CLIP	20371350
MIRT569278	hsa-miR-608	PAR-CLIP	20371350
MIRT569277	hsa-miR-4730	PAR-CLIP	20371350
MIRT469970	hsa-miR-302f	PAR-CLIP	20371350
MIRT469967	hsa-miR-4257	PAR-CLIP	20371350
MIRT469966	hsa-miR-4532	PAR-CLIP	20371350
MIRT469965	hsa-miR-219b-3p	PAR-CLIP	20371350
MIRT469963	hsa-miR-377-5p	PAR-CLIP	20371350
MIRT469962	hsa-miR-6086	PAR-CLIP	20371350
MIRT469961	hsa-miR-298	PAR-CLIP	20371350
MIRT469960	hsa-miR-2467-3p	PAR-CLIP	20371350
MIRT469959	hsa-miR-6499-3p	PAR-CLIP	20371350
MIRT469958	hsa-miR-486-3p	PAR-CLIP	20371350
MIRT469957	hsa-miR-328-5p	PAR-CLIP	20371350
MIRT469956	hsa-miR-6885-5p	PAR-CLIP	20371350
MIRT037821	hsa-miR-455-3p	PAR-CLIP	20371350
MIRT469955	hsa-miR-1273e	PAR-CLIP	20371350
MIRT469954	hsa-miR-6516-5p	PAR-CLIP	20371350
MIRT469970	hsa-miR-302f	PAR-CLIP	21572407
MIRT469966	hsa-miR-4532	PAR-CLIP	21572407
MIRT469965	hsa-miR-219b-3p	PAR-CLIP	21572407
MIRT469961	hsa-miR-298	PAR-CLIP	21572407
MIRT469960	hsa-miR-2467-3p	PAR-CLIP	21572407
MIRT469958	hsa-miR-486-3p	PAR-CLIP	21572407
MIRT469957	hsa-miR-328-5p	PAR-CLIP	21572407
MIRT469956	hsa-miR-6885-5p	PAR-CLIP	21572407
MIRT469955	hsa-miR-1273e	PAR-CLIP	21572407
MIRT469974	hsa-miR-548an	PAR-CLIP	23592263
MIRT469973	hsa-miR-6768-3p	PAR-CLIP	23592263
MIRT469972	hsa-miR-4484	PAR-CLIP	23592263
MIRT469971	hsa-miR-3714	PAR-CLIP	23592263
MIRT469970	hsa-miR-302f	PAR-CLIP	23592263
MIRT469969	hsa-miR-1910-3p	PAR-CLIP	23592263
MIRT469968	hsa-miR-6511a-5p	PAR-CLIP	23592263
MIRT469967	hsa-miR-4257	PAR-CLIP	23592263
MIRT469966	hsa-miR-4532	PAR-CLIP	23592263
MIRT469965	hsa-miR-219b-3p	PAR-CLIP	23592263
MIRT469964	hsa-miR-4537	PAR-CLIP	23592263
MIRT469963	hsa-miR-377-5p	PAR-CLIP	23592263
MIRT469962	hsa-miR-6086	PAR-CLIP	23592263
MIRT469961	hsa-miR-298	PAR-CLIP	23592263
MIRT469960	hsa-miR-2467-3p	PAR-CLIP	23592263
MIRT469959	hsa-miR-6499-3p	PAR-CLIP	23592263
MIRT469958	hsa-miR-486-3p	PAR-CLIP	23592263
MIRT469957	hsa-miR-328-5p	PAR-CLIP	23592263
MIRT469956	hsa-miR-6885-5p	PAR-CLIP	23592263
MIRT037821	hsa-miR-455-3p	PAR-CLIP	23592263
MIRT469955	hsa-miR-1273e	PAR-CLIP	23592263
MIRT469954	hsa-miR-6516-5p	PAR-CLIP	23592263
MIRT469952	hsa-miR-6858-3p	PAR-CLIP	23592263
MIRT469953	hsa-miR-4676-5p	PAR-CLIP	23592263
MIRT469951	hsa-miR-575	PAR-CLIP	23592263
MIRT469950	hsa-miR-1296-3p	PAR-CLIP	23592263
MIRT469949	hsa-miR-4795-5p	PAR-CLIP	23592263
MIRT469948	hsa-miR-6878-5p	PAR-CLIP	23592263
MIRT469947	hsa-miR-3175	PAR-CLIP	23592263
MIRT469946	hsa-miR-625-5p	PAR-CLIP	23592263
MIRT469945	hsa-miR-4723-5p	PAR-CLIP	23592263
MIRT469944	hsa-miR-5698	PAR-CLIP	23592263
MIRT469942	hsa-miR-6870-5p	PAR-CLIP	23592263
MIRT469943	hsa-miR-7111-5p	PAR-CLIP	23592263
MIRT469941	hsa-miR-4525	PAR-CLIP	23592263
MIRT469940	hsa-miR-5010-5p	PAR-CLIP	23592263
MIRT469939	hsa-miR-3190-3p	PAR-CLIP	23592263
MIRT469938	hsa-miR-4447	PAR-CLIP	23592263
MIRT469937	hsa-miR-4472	PAR-CLIP	23592263
MIRT469936	hsa-miR-4662a-5p	PAR-CLIP	23592263
MIRT469935	hsa-miR-1275	PAR-CLIP	23592263
MIRT469934	hsa-miR-4665-5p	PAR-CLIP	23592263
MIRT469955	hsa-miR-1273e	PAR-CLIP	26701625
MIRT469955	hsa-miR-1273e	PAR-CLIP	26701625
MIRT469965	hsa-miR-219b-3p	PAR-CLIP	26701625
MIRT469965	hsa-miR-219b-3p	PAR-CLIP	26701625
MIRT469960	hsa-miR-2467-3p	PAR-CLIP	26701625
MIRT469960	hsa-miR-2467-3p	PAR-CLIP	26701625
MIRT469970	hsa-miR-302f	PAR-CLIP	26701625
MIRT469970	hsa-miR-302f	PAR-CLIP	26701625
MIRT469957	hsa-miR-328-5p	PAR-CLIP	26701625
MIRT469957	hsa-miR-328-5p	PAR-CLIP	26701625
MIRT469963	hsa-miR-377-5p	PAR-CLIP	26701625
MIRT469963	hsa-miR-377-5p	PAR-CLIP	26701625
MIRT469967	hsa-miR-4257	PAR-CLIP	26701625
MIRT469967	hsa-miR-4257	PAR-CLIP	26701625
MIRT469966	hsa-miR-4532	PAR-CLIP	26701625
MIRT469966	hsa-miR-4532	PAR-CLIP	26701625
MIRT469964	hsa-miR-4537	PAR-CLIP	26701625
MIRT469964	hsa-miR-4537	PAR-CLIP	26701625
MIRT037821	hsa-miR-455-3p	PAR-CLIP	26701625
MIRT037821	hsa-miR-455-3p	PAR-CLIP	26701625
MIRT469958	hsa-miR-486-3p	PAR-CLIP	26701625
MIRT469958	hsa-miR-486-3p	PAR-CLIP	26701625
MIRT469962	hsa-miR-6086	PAR-CLIP	26701625
MIRT469962	hsa-miR-6086	PAR-CLIP	26701625
MIRT469959	hsa-miR-6499-3p	PAR-CLIP	26701625
MIRT469959	hsa-miR-6499-3p	PAR-CLIP	26701625
MIRT469954	hsa-miR-6516-5p	PAR-CLIP	26701625
MIRT469954	hsa-miR-6516-5p	PAR-CLIP	26701625
MIRT469956	hsa-miR-6885-5p	PAR-CLIP	26701625
MIRT469956	hsa-miR-6885-5p	PAR-CLIP	26701625
MIRT717394	hsa-miR-646	HITS-CLIP	19536157
MIRT469952	hsa-miR-6858-3p	HITS-CLIP	19536157
MIRT717393	hsa-miR-4691-3p	HITS-CLIP	19536157
MIRT717392	hsa-miR-6736-3p	HITS-CLIP	19536157
MIRT717391	hsa-miR-4530	HITS-CLIP	19536157
MIRT717390	hsa-miR-6803-3p	HITS-CLIP	19536157
MIRT717388	hsa-miR-4655-3p	HITS-CLIP	19536157
MIRT717389	hsa-miR-4469	HITS-CLIP	19536157
MIRT717387	hsa-miR-4660	HITS-CLIP	19536157
MIRT717386	hsa-miR-7106-3p	HITS-CLIP	19536157
MIRT717385	hsa-miR-3157-5p	HITS-CLIP	19536157
MIRT717384	hsa-miR-425-3p	HITS-CLIP	19536157
MIRT469970	hsa-miR-302f	HITS-CLIP	23313552
MIRT469966	hsa-miR-4532	HITS-CLIP	23313552
MIRT469965	hsa-miR-219b-3p	HITS-CLIP	23313552
MIRT469964	hsa-miR-4537	HITS-CLIP	23313552
MIRT469963	hsa-miR-377-5p	HITS-CLIP	23313552
MIRT469962	hsa-miR-6086	HITS-CLIP	23313552
MIRT469960	hsa-miR-2467-3p	HITS-CLIP	23313552
MIRT469959	hsa-miR-6499-3p	HITS-CLIP	23313552
MIRT469958	hsa-miR-486-3p	HITS-CLIP	23313552
MIRT469957	hsa-miR-328-5p	HITS-CLIP	23313552
MIRT469956	hsa-miR-6885-5p	HITS-CLIP	23313552
MIRT037821	hsa-miR-455-3p	HITS-CLIP	23313552
MIRT469955	hsa-miR-1273e	HITS-CLIP	23313552
MIRT469954	hsa-miR-6516-5p	HITS-CLIP	23313552
MIRT700493	hsa-miR-6771-3p	HITS-CLIP	23313552
MIRT700492	hsa-miR-619-3p	HITS-CLIP	23313552
MIRT700491	hsa-miR-7851-3p	HITS-CLIP	23313552
MIRT700490	hsa-miR-340-3p	HITS-CLIP	23313552
MIRT700489	hsa-miR-6827-3p	HITS-CLIP	23313552
MIRT700488	hsa-miR-939-3p	HITS-CLIP	23313552
MIRT700487	hsa-miR-4486	HITS-CLIP	23313552
MIRT700486	hsa-miR-585-3p	HITS-CLIP	23313552
MIRT700485	hsa-miR-1268a	HITS-CLIP	23313552
MIRT700484	hsa-miR-1268b	HITS-CLIP	23313552
MIRT700483	hsa-miR-4684-5p	HITS-CLIP	23313552
MIRT645719	hsa-miR-4677-3p	HITS-CLIP	23824327
MIRT645718	hsa-miR-4679	HITS-CLIP	23824327
MIRT645717	hsa-miR-2115-5p	HITS-CLIP	23824327
MIRT645716	hsa-miR-4504	HITS-CLIP	23824327
MIRT645715	hsa-miR-542-3p	HITS-CLIP	23824327
MIRT645714	hsa-let-7c-3p	HITS-CLIP	23824327
MIRT645713	hsa-let-7a-2-3p	HITS-CLIP	23824327
MIRT645712	hsa-let-7g-3p	HITS-CLIP	23824327
MIRT645711	hsa-miR-493-5p	HITS-CLIP	23824327
MIRT569285	hsa-miR-4787-5p	PAR-CLIP	20371350
MIRT569284	hsa-miR-658	PAR-CLIP	20371350
MIRT569283	hsa-miR-25-5p	PAR-CLIP	20371350
MIRT569282	hsa-miR-6752-5p	PAR-CLIP	20371350
MIRT569280	hsa-miR-6842-5p	PAR-CLIP	20371350
MIRT569281	hsa-miR-7110-5p	PAR-CLIP	20371350
MIRT569279	hsa-miR-4651	PAR-CLIP	20371350
MIRT569278	hsa-miR-608	PAR-CLIP	20371350
MIRT569277	hsa-miR-4730	PAR-CLIP	20371350
MIRT469970	hsa-miR-302f	PAR-CLIP	20371350
MIRT469967	hsa-miR-4257	PAR-CLIP	20371350
MIRT469966	hsa-miR-4532	PAR-CLIP	20371350
MIRT469965	hsa-miR-219b-3p	PAR-CLIP	20371350
MIRT469963	hsa-miR-377-5p	PAR-CLIP	20371350
MIRT469962	hsa-miR-6086	PAR-CLIP	20371350
MIRT469961	hsa-miR-298	PAR-CLIP	20371350
MIRT469960	hsa-miR-2467-3p	PAR-CLIP	20371350
MIRT469959	hsa-miR-6499-3p	PAR-CLIP	20371350
MIRT469958	hsa-miR-486-3p	PAR-CLIP	20371350
MIRT469957	hsa-miR-328-5p	PAR-CLIP	20371350
MIRT469956	hsa-miR-6885-5p	PAR-CLIP	20371350
MIRT037821	hsa-miR-455-3p	PAR-CLIP	20371350
MIRT469955	hsa-miR-1273e	PAR-CLIP	20371350
MIRT469954	hsa-miR-6516-5p	PAR-CLIP	20371350
MIRT469970	hsa-miR-302f	PAR-CLIP	21572407
MIRT469966	hsa-miR-4532	PAR-CLIP	21572407
MIRT469965	hsa-miR-219b-3p	PAR-CLIP	21572407
MIRT469961	hsa-miR-298	PAR-CLIP	21572407
MIRT469960	hsa-miR-2467-3p	PAR-CLIP	21572407
MIRT469958	hsa-miR-486-3p	PAR-CLIP	21572407
MIRT469957	hsa-miR-328-5p	PAR-CLIP	21572407
MIRT469956	hsa-miR-6885-5p	PAR-CLIP	21572407
MIRT469955	hsa-miR-1273e	PAR-CLIP	21572407
MIRT469974	hsa-miR-548an	PAR-CLIP	23592263
MIRT469973	hsa-miR-6768-3p	PAR-CLIP	23592263
MIRT469972	hsa-miR-4484	PAR-CLIP	23592263
MIRT469971	hsa-miR-3714	PAR-CLIP	23592263
MIRT469970	hsa-miR-302f	PAR-CLIP	23592263
MIRT469969	hsa-miR-1910-3p	PAR-CLIP	23592263
MIRT469968	hsa-miR-6511a-5p	PAR-CLIP	23592263
MIRT469967	hsa-miR-4257	PAR-CLIP	23592263
MIRT469966	hsa-miR-4532	PAR-CLIP	23592263
MIRT469965	hsa-miR-219b-3p	PAR-CLIP	23592263
MIRT469964	hsa-miR-4537	PAR-CLIP	23592263
MIRT469963	hsa-miR-377-5p	PAR-CLIP	23592263
MIRT469962	hsa-miR-6086	PAR-CLIP	23592263
MIRT469961	hsa-miR-298	PAR-CLIP	23592263
MIRT469960	hsa-miR-2467-3p	PAR-CLIP	23592263
MIRT469959	hsa-miR-6499-3p	PAR-CLIP	23592263
MIRT469958	hsa-miR-486-3p	PAR-CLIP	23592263
MIRT469957	hsa-miR-328-5p	PAR-CLIP	23592263
MIRT469956	hsa-miR-6885-5p	PAR-CLIP	23592263
MIRT037821	hsa-miR-455-3p	PAR-CLIP	23592263
MIRT469955	hsa-miR-1273e	PAR-CLIP	23592263
MIRT469954	hsa-miR-6516-5p	PAR-CLIP	23592263
MIRT469952	hsa-miR-6858-3p	PAR-CLIP	23592263
MIRT469953	hsa-miR-4676-5p	PAR-CLIP	23592263
MIRT469951	hsa-miR-575	PAR-CLIP	23592263
MIRT469950	hsa-miR-1296-3p	PAR-CLIP	23592263
MIRT469949	hsa-miR-4795-5p	PAR-CLIP	23592263
MIRT469948	hsa-miR-6878-5p	PAR-CLIP	23592263
MIRT469947	hsa-miR-3175	PAR-CLIP	23592263
MIRT469946	hsa-miR-625-5p	PAR-CLIP	23592263
MIRT469945	hsa-miR-4723-5p	PAR-CLIP	23592263
MIRT469944	hsa-miR-5698	PAR-CLIP	23592263
MIRT469942	hsa-miR-6870-5p	PAR-CLIP	23592263
MIRT469943	hsa-miR-7111-5p	PAR-CLIP	23592263
MIRT469941	hsa-miR-4525	PAR-CLIP	23592263
MIRT469940	hsa-miR-5010-5p	PAR-CLIP	23592263
MIRT469939	hsa-miR-3190-3p	PAR-CLIP	23592263
MIRT469938	hsa-miR-4447	PAR-CLIP	23592263
MIRT469937	hsa-miR-4472	PAR-CLIP	23592263
MIRT469936	hsa-miR-4662a-5p	PAR-CLIP	23592263
MIRT469935	hsa-miR-1275	PAR-CLIP	23592263
MIRT469934	hsa-miR-4665-5p	PAR-CLIP	23592263
MIRT1276067	hsa-miR-122	CLIP-seq
MIRT1276068	hsa-miR-1276	CLIP-seq
MIRT1276069	hsa-miR-1911	CLIP-seq
MIRT1276070	hsa-miR-193a-3p	CLIP-seq
MIRT1276071	hsa-miR-193b	CLIP-seq
MIRT1276072	hsa-miR-199a-3p	CLIP-seq
MIRT1276073	hsa-miR-199b-3p	CLIP-seq
MIRT1276074	hsa-miR-299-5p	CLIP-seq
MIRT1276075	hsa-miR-3064-3p	CLIP-seq
MIRT1276076	hsa-miR-3129-5p	CLIP-seq
MIRT1276077	hsa-miR-3148	CLIP-seq
MIRT1276078	hsa-miR-3176	CLIP-seq
MIRT1276079	hsa-miR-3198	CLIP-seq
MIRT1276080	hsa-miR-3616-3p	CLIP-seq
MIRT1276081	hsa-miR-3922-3p	CLIP-seq
MIRT1276082	hsa-miR-4309	CLIP-seq
MIRT1276083	hsa-miR-431	CLIP-seq
MIRT1276084	hsa-miR-432	CLIP-seq
MIRT1276085	hsa-miR-4712-5p	CLIP-seq
MIRT1276086	hsa-miR-4715-3p	CLIP-seq
MIRT1276087	hsa-miR-4721	CLIP-seq
MIRT1276088	hsa-miR-4761-3p	CLIP-seq
MIRT1276089	hsa-miR-770-5p	CLIP-seq
MIRT1276067	hsa-miR-122	CLIP-seq
MIRT1276090	hsa-miR-1254	CLIP-seq
MIRT1276091	hsa-miR-1255a	CLIP-seq
MIRT1276092	hsa-miR-1255b	CLIP-seq
MIRT1276068	hsa-miR-1276	CLIP-seq
MIRT1276069	hsa-miR-1911	CLIP-seq
MIRT1276070	hsa-miR-193a-3p	CLIP-seq
MIRT1276071	hsa-miR-193b	CLIP-seq
MIRT1276074	hsa-miR-299-5p	CLIP-seq
MIRT1276075	hsa-miR-3064-3p	CLIP-seq
MIRT1276093	hsa-miR-3116	CLIP-seq
MIRT1276094	hsa-miR-3135b	CLIP-seq
MIRT1276077	hsa-miR-3148	CLIP-seq
MIRT1276095	hsa-miR-3150b-3p	CLIP-seq
MIRT1276078	hsa-miR-3176	CLIP-seq
MIRT1276096	hsa-miR-3179	CLIP-seq
MIRT1276097	hsa-miR-3188	CLIP-seq
MIRT1276098	hsa-miR-3189-5p	CLIP-seq
MIRT1276079	hsa-miR-3198	CLIP-seq
MIRT1276080	hsa-miR-3616-3p	CLIP-seq
MIRT1276099	hsa-miR-3652	CLIP-seq
MIRT1276100	hsa-miR-3690	CLIP-seq
MIRT1276101	hsa-miR-370	CLIP-seq
MIRT1276081	hsa-miR-3922-3p	CLIP-seq
MIRT1276082	hsa-miR-4309	CLIP-seq
MIRT1276084	hsa-miR-432	CLIP-seq
MIRT1276102	hsa-miR-4430	CLIP-seq
MIRT1276103	hsa-miR-4446-3p	CLIP-seq
MIRT1276104	hsa-miR-4492	CLIP-seq
MIRT1276105	hsa-miR-4498	CLIP-seq
MIRT1276106	hsa-miR-4529-5p	CLIP-seq
MIRT1276107	hsa-miR-4535	CLIP-seq
MIRT1276108	hsa-miR-4640-5p	CLIP-seq
MIRT1276087	hsa-miR-4721	CLIP-seq
MIRT1276109	hsa-miR-4726-5p	CLIP-seq
MIRT1276110	hsa-miR-4731-5p	CLIP-seq
MIRT1276111	hsa-miR-4758-3p	CLIP-seq
MIRT1276088	hsa-miR-4761-3p	CLIP-seq
MIRT1276112	hsa-miR-4763-5p	CLIP-seq
MIRT1276113	hsa-miR-4766-5p	CLIP-seq
MIRT1276114	hsa-miR-4784	CLIP-seq
MIRT1276115	hsa-miR-488	CLIP-seq
MIRT1276116	hsa-miR-492	CLIP-seq
MIRT1276117	hsa-miR-515-3p	CLIP-seq
MIRT1276118	hsa-miR-519e	CLIP-seq
MIRT1276119	hsa-miR-550a	CLIP-seq
MIRT1276120	hsa-miR-762	CLIP-seq
MIRT1276121	hsa-miR-765	CLIP-seq
MIRT1276122	hsa-miR-939	CLIP-seq
MIRT1276078	hsa-miR-3176	CLIP-seq
MIRT2081186	hsa-miR-3194-3p	CLIP-seq
MIRT1276081	hsa-miR-3922-3p	CLIP-seq
MIRT1276103	hsa-miR-4446-3p	CLIP-seq
MIRT2081187	hsa-miR-4680-5p	CLIP-seq
MIRT1276087	hsa-miR-4721	CLIP-seq
MIRT2081188	hsa-miR-548c-3p	CLIP-seq
MIRT2307091	hsa-miR-1224-5p	CLIP-seq
MIRT2307092	hsa-miR-1913	CLIP-seq
MIRT2307093	hsa-miR-3155	CLIP-seq
MIRT2307094	hsa-miR-3155b	CLIP-seq
MIRT1276078	hsa-miR-3176	CLIP-seq
MIRT2307095	hsa-miR-324-3p	CLIP-seq
MIRT1276081	hsa-miR-3922-3p	CLIP-seq
MIRT2307096	hsa-miR-4269	CLIP-seq
MIRT2307097	hsa-miR-4287	CLIP-seq
MIRT2307098	hsa-miR-4645-5p	CLIP-seq
MIRT2307099	hsa-miR-4649-3p	CLIP-seq
MIRT2307100	hsa-miR-4673	CLIP-seq
MIRT2081187	hsa-miR-4680-5p	CLIP-seq
MIRT2307101	hsa-miR-4685-3p	CLIP-seq
MIRT2307102	hsa-miR-4726-3p	CLIP-seq
MIRT2307103	hsa-miR-4749-3p	CLIP-seq
MIRT2307104	hsa-miR-4751	CLIP-seq
MIRT2307105	hsa-miR-484	CLIP-seq
MIRT2307106	hsa-miR-545	CLIP-seq
MIRT2307107	hsa-miR-570	CLIP-seq
MIRT1276067	hsa-miR-122	CLIP-seq
MIRT1276090	hsa-miR-1254	CLIP-seq
MIRT1276068	hsa-miR-1276	CLIP-seq
MIRT1276070	hsa-miR-193a-3p	CLIP-seq
MIRT1276071	hsa-miR-193b	CLIP-seq
MIRT2604623	hsa-miR-205	CLIP-seq
MIRT2604624	hsa-miR-214	CLIP-seq
MIRT1276074	hsa-miR-299-5p	CLIP-seq
MIRT1276075	hsa-miR-3064-3p	CLIP-seq
MIRT2604625	hsa-miR-3065-3p	CLIP-seq
MIRT1276093	hsa-miR-3116	CLIP-seq
MIRT2604626	hsa-miR-3130-3p	CLIP-seq
MIRT1276094	hsa-miR-3135b	CLIP-seq
MIRT1276077	hsa-miR-3148	CLIP-seq
MIRT2307093	hsa-miR-3155	CLIP-seq
MIRT2307094	hsa-miR-3155b	CLIP-seq
MIRT1276078	hsa-miR-3176	CLIP-seq
MIRT1276096	hsa-miR-3179	CLIP-seq
MIRT2081186	hsa-miR-3194-3p	CLIP-seq
MIRT1276079	hsa-miR-3198	CLIP-seq
MIRT1276080	hsa-miR-3616-3p	CLIP-seq
MIRT2604627	hsa-miR-3619-5p	CLIP-seq
MIRT1276099	hsa-miR-3652	CLIP-seq
MIRT1276100	hsa-miR-3690	CLIP-seq
MIRT1276081	hsa-miR-3922-3p	CLIP-seq
MIRT2604628	hsa-miR-4267	CLIP-seq
MIRT2604629	hsa-miR-4291	CLIP-seq
MIRT1276082	hsa-miR-4309	CLIP-seq
MIRT1276084	hsa-miR-432	CLIP-seq
MIRT2604630	hsa-miR-4323	CLIP-seq
MIRT1276102	hsa-miR-4430	CLIP-seq
MIRT1276103	hsa-miR-4446-3p	CLIP-seq
MIRT2604631	hsa-miR-4476	CLIP-seq
MIRT1276104	hsa-miR-4492	CLIP-seq
MIRT1276105	hsa-miR-4498	CLIP-seq
MIRT1276107	hsa-miR-4535	CLIP-seq
MIRT2604632	hsa-miR-4661-3p	CLIP-seq
MIRT1276087	hsa-miR-4721	CLIP-seq
MIRT2604633	hsa-miR-4753-5p	CLIP-seq
MIRT1276088	hsa-miR-4761-3p	CLIP-seq
MIRT1276113	hsa-miR-4766-5p	CLIP-seq
MIRT2604634	hsa-miR-4793-3p	CLIP-seq
MIRT2307105	hsa-miR-484	CLIP-seq
MIRT2604635	hsa-miR-485-3p	CLIP-seq
MIRT1276115	hsa-miR-488	CLIP-seq
MIRT1276116	hsa-miR-492	CLIP-seq
MIRT2604636	hsa-miR-494	CLIP-seq
MIRT2307107	hsa-miR-570	CLIP-seq
MIRT2604637	hsa-miR-572	CLIP-seq
MIRT2604638	hsa-miR-615-3p	CLIP-seq
MIRT2604639	hsa-miR-761	CLIP-seq
MIRT1276120	hsa-miR-762	CLIP-seq
MIRT1276121	hsa-miR-765	CLIP-seq
MIRT2604640	hsa-miR-885-3p	CLIP-seq
MIRT2604641	hsa-miR-922	CLIP-seq
MIRT1276067	hsa-miR-122	CLIP-seq
MIRT1276090	hsa-miR-1254	CLIP-seq
MIRT1276068	hsa-miR-1276	CLIP-seq
MIRT1276070	hsa-miR-193a-3p	CLIP-seq
MIRT1276071	hsa-miR-193b	CLIP-seq
MIRT1276074	hsa-miR-299-5p	CLIP-seq
MIRT1276075	hsa-miR-3064-3p	CLIP-seq
MIRT2604625	hsa-miR-3065-3p	CLIP-seq
MIRT1276093	hsa-miR-3116	CLIP-seq
MIRT2604626	hsa-miR-3130-3p	CLIP-seq
MIRT1276094	hsa-miR-3135b	CLIP-seq
MIRT1276077	hsa-miR-3148	CLIP-seq
MIRT2307093	hsa-miR-3155	CLIP-seq
MIRT2307094	hsa-miR-3155b	CLIP-seq
MIRT1276078	hsa-miR-3176	CLIP-seq
MIRT1276096	hsa-miR-3179	CLIP-seq
MIRT2081186	hsa-miR-3194-3p	CLIP-seq
MIRT1276079	hsa-miR-3198	CLIP-seq
MIRT1276080	hsa-miR-3616-3p	CLIP-seq
MIRT1276099	hsa-miR-3652	CLIP-seq
MIRT1276100	hsa-miR-3690	CLIP-seq
MIRT1276081	hsa-miR-3922-3p	CLIP-seq
MIRT2604628	hsa-miR-4267	CLIP-seq
MIRT1276082	hsa-miR-4309	CLIP-seq
MIRT1276084	hsa-miR-432	CLIP-seq
MIRT2604630	hsa-miR-4323	CLIP-seq
MIRT1276102	hsa-miR-4430	CLIP-seq
MIRT1276103	hsa-miR-4446-3p	CLIP-seq
MIRT2604631	hsa-miR-4476	CLIP-seq
MIRT1276104	hsa-miR-4492	CLIP-seq
MIRT1276105	hsa-miR-4498	CLIP-seq
MIRT1276107	hsa-miR-4535	CLIP-seq
MIRT1276087	hsa-miR-4721	CLIP-seq
MIRT1276088	hsa-miR-4761-3p	CLIP-seq
MIRT2604634	hsa-miR-4793-3p	CLIP-seq
MIRT2307105	hsa-miR-484	CLIP-seq
MIRT1276116	hsa-miR-492	CLIP-seq
MIRT2604636	hsa-miR-494	CLIP-seq
MIRT2604637	hsa-miR-572	CLIP-seq
MIRT2604638	hsa-miR-615-3p	CLIP-seq
MIRT1276120	hsa-miR-762	CLIP-seq
MIRT1276121	hsa-miR-765	CLIP-seq
MIRT2604640	hsa-miR-885-3p	CLIP-seq

Gene ontology (GO)

GO ID	Ontology	Definition	Evidence	Reference
GO:0004725	Function	Protein tyrosine phosphatase activity	IBA	21873635
GO:0004725	Function	Protein tyrosine phosphatase activity	IDA	10338209
GO:0004725	Function	Protein tyrosine phosphatase activity	IMP	23358419
GO:0005001	Function	Transmembrane receptor protein tyrosine phosphatase activity	TAS	8995282
GO:0005886	Component	Plasma membrane	TAS
GO:0005887	Component	Integral component of plasma membrane	TAS	2972792
GO:0006470	Process	Protein dephosphorylation	IBA	21873635
GO:0007155	Process	Cell adhesion	TAS	7665159
GO:0007185	Process	Transmembrane receptor protein tyrosine phosphatase signaling pathway	TAS	8995282
GO:0008201	Function	Heparin binding	IEA
GO:0016477	Process	Cell migration	IMP	23358419
GO:0031102	Process	Neuron projection regeneration	IEA
GO:0035335	Process	Peptidyl-tyrosine dephosphorylation	IBA	21873635
GO:0035335	Process	Peptidyl-tyrosine dephosphorylation	IMP	23358419
GO:0035373	Function	Chondroitin sulfate proteoglycan binding	IEA
GO:0043005	Component	Neuron projection	IEA
GO:0043025	Component	Neuronal cell body	IEA
GO:0044877	Function	Protein-containing complex binding	IEA
GO:0048679	Process	Regulation of axon regeneration	IEA
GO:0050839	Function	Cell adhesion molecule binding	IPI	23986473
GO:0070062	Component	Extracellular exosome	HDA	19199708
GO:0099560	Process	Synaptic membrane adhesion	IBA	21873635
GO:0099560	Process	Synaptic membrane adhesion	IDA	26321637
GO:0099560	Process	Synaptic membrane adhesion	IMP	26321637
GO:1900121	Process	Negative regulation of receptor binding	IMP	23358419

Other IDs

• MIM: 179590
• HGNC: 9670
• e!Ensembl: ENSG00000142949

Protein

• UniProt ID: P10586
• Protein name: Receptor-type tyrosine-protein phosphatase F (EC 3.1.3.48) (Leukocyte common antigen related) (LAR)
• Protein function: Possible cell adhesion receptor. It possesses an intrinsic protein tyrosine phosphatase activity (PTPase) and dephosphorylates EPHA2 regulating its activity.; The first PTPase domain has enzymatic activity, while the second one seems t
• PDB: 1LAR, 2DJU, 2DN7, 2EDX, 2EDY, 2YD5, 2YD8, 4N5U, 6KR4, 6TPT, 6TPU, 6TPV, 6TPW
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF07679	I-set	33 → 124	Immunoglobulin I-set domain	Domain
  PF07679	I-set	135 → 225	Immunoglobulin I-set domain	Domain
  PF07679	I-set	232 → 315	Immunoglobulin I-set domain	Domain
  PF00041	fn3	320 → 401	Fibronectin type III domain	Domain
  PF00041	fn3	415 → 500	Fibronectin type III domain	Domain
  PF00041	fn3	513 → 594	Fibronectin type III domain	Domain
  PF00041	fn3	608 → 696	Fibronectin type III domain	Domain
  PF00041	fn3	710 → 809	Fibronectin type III domain	Domain
  PF00041	fn3	823 → 903	Fibronectin type III domain	Domain
  PF00041	fn3	917 → 1000	Fibronectin type III domain	Domain
  PF00102	Y_phosphatase	1375 → 1606	Protein-tyrosine phosphatase	Domain
  PF00102	Y_phosphatase	1664 → 1897	Protein-tyrosine phosphatase	Domain

• Sequence:

  MAPEPAPGRTMVPLVPALVMLGLVAGAHGDSKPVFIKVPEDQTGLSGGVASFVCQATGEP
  KPRITWMKKGKKVSSQRFEVIEFDDGAGSVLRIQPLRVQRDEAIYECTATNSLGEINTSA
  KLSVLEEEQLPPGFPSIDMGPQLKVVEKARTATMLCAAGGNPDPEISWFKDFLPVDPATS
  NGRIKQLRSGALQIESSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVAPRFSIPPSS
  QEVMPGGSVNLTCVAVGAPMPYVKWMMGAEELTKEDEMPVGRNVLELSNVVRSANYTCVA
  ISSLGMIEATAQVTVKALPKPPIDLVVTETTATSVTLTWDSGNSEPVTYYGIQYRAAGTE
  GPFQEVDGVATTRYSIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQAPSSPPRRV
  QARMLSASTMLVQWEPPEEPNGLVRGYRVYYTPDSRRPPNAWHKHNTDAGLLTTVGSLLP
  GITYSLRVLAFTAVGDGPPSPTIQVKTQQGVPAQPADFQAEVESDTRIQLSWLLPPQERI
  IMYELVYWAAEDEDQQHKVTFDPTSSYTLEDLKPDTLYRFQLAARSDMGVGVFTPTIEAR
  TAQSTPSAPPQKVMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRGRHVVD
  GISREHSSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDEDVPSGPPRKVEVEPL
  NSTAVHVYWKLPVPSKQHGQIRGYQVTYVRLENGEPRGLPIIQDVMLAEAQWRPEESEDY
  ETTISGLTPETTYSVTVAAYTTKGDGARSKPKIVTTTGAVPGRPTMMISTTAMNTALLQW
  HPPKELPGELLGYRLQYCRADEARPNTIDFGKDDQHFTVTGLHKGTTYIFRLAAKNRAGL
  GEEFEKEIRTPEDLPSGFPQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTVVFRDINS
  QQELQNITTDTRFTLTGLKPDTTYDIKVRAWTSKGSGPLSPSIQSRTMPVEQVFAKNFRV
  AAAMKTSVLLSWEVPDSYKSAVPFKILYNGQSVEVDGHSMRKLIADLQPNTEYSFVLMNR
  GSSAGGLQHLVSIRTAPDLLPHKPLPASAYIEDGRFDLSMPHVQDPSLVRWFYIVVVPID
  RVGGSMLTPRWSTPEELELDELLEAIEQGGEEQRRRRRQAERLKPYVAAQLDVLPETFTL
  GDKKNYRGFYNRPLSPDLSYQCFVLASLKEPMDQKRYASSPYSDEIVVQVTPAQQQEEPE
  MLWVTGPVLAVILIILIVIAILLFKRKRTHSPSSKDEQSIGLKDSLLAHSSDPVEMRRLN
  YQTPGMRDHPPIPITDLADNIERLKANDGLKFSQEYESIDPGQQFTWENSNLEVNKPKNR
  YANVIAYDHSRVILTSIDGVPGSDYINANYIDGYRKQNAYIATQGPLPETMGDFWRMVWE
  QRTATVVMMTRLEEKSRVKCDQYWPARGTETCGLIQVTLLDTVELATYTVRTFALHKSGS
  SEKRELRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPLDAGPMVVHCSAGVGRTGCFIV
  IDAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYVFIHEALLEAATCGHTEVPARNL
  YAHIQKLGQVPPGESVTAMELEFKLLASSKAHTSRFISANLPCNKFKNRLVNIMPYELTR
  VCLQPIRGVEGSDYINASFLDGYRQQKAYIATQGPLAESTEDFWRMLWEHNSTIIVMLTK
  LREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTIRQFQF
  TDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMR
  YEGVVDMFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT

• Sequence length: 1907

Pathways

KEGG:

Cell adhesion molecules
Adherens junction
Insulin signaling pathway
Insulin resistance

Reactome:

Receptor-type tyrosine-protein phosphatases
Synaptic adhesion-like molecules

Associated diseases

Causal
Disease name	Disease term	dbSNP ID	References
Attention deficit hyperactivity disorder	Attention deficit hyperactivity disorder	rs120074176, rs786205019	30610198, 30478444
Gastric cancer	Hereditary Diffuse Gastric Cancer	rs137854571, rs63751108, rs34612342, rs121908383, rs121909144, rs121909775, rs121909219, rs121909223, rs63750871, rs80359530, rs121964873, rs121913530, rs606231203, rs121918505, rs587776802, rs28933369, rs121912469, rs80358011, rs397507262, rs80359439, rs397507333, rs80359543, rs80358831, rs80359596, rs80358920, rs80358972, rs80359659, rs397507404, rs397514661, rs80359516, rs200495564, rs80358419, rs80359274, rs80359283, rs80358427, rs80358428, rs80358435, rs81002805, rs397507660, rs397507663, rs80359391, rs80359443, rs81002797, rs80359466, rs397507752, rs80359484, rs80359603, rs397507954, rs80359058, rs80359071, rs397507981, rs80359121, rs80357086, rs80357064, rs397508936, rs80357695, rs80357661, rs397509035, rs80357544, rs80357577, rs80357881, rs80357296, rs80356923, rs80356866, rs80357504, rs80357390, rs80357239, rs80358099, rs397509284, rs80357258, rs199474738, rs199474747, rs587779204, rs63750439, rs267608076, rs587779246, rs63749999, rs267608078, rs63751327, rs267607719, rs267607734, rs63750706, rs63751711, rs587779047, rs587779075, rs267607949, rs63750633, rs63750803, rs63751618, rs267608154, rs200640585, rs80358018, rs80357857, rs80357882, rs180177103, rs587779815, rs587779865, rs587779872, rs587780059, rs121912666, rs587780088, rs587780104, rs200432447, rs180177100, rs587780226, rs587780784, rs587776416, rs587781276, rs587781629, rs587781694, rs587781727, rs587781730, rs587781807, rs587781894, rs587781948, rs121913344, rs587782292, rs587782350, rs587782558, rs587782719, rs587782885, rs587783057, rs730881833, rs730881411, rs730881336, rs139770721, rs730881869, rs730881633, rs730882007, rs786203115, rs765123255, rs1553333738, rs762083530, rs786202800, rs17174393, rs55996097, rs750621215, rs786203451, rs747604569, rs764389018, rs786204433, rs786204862, rs772821016, rs779582317, rs863225406, rs193922343, rs759965045, rs63749919, rs760228510, rs746481984, rs762307622, rs876659736, rs876660933, rs747727055, rs1450394308, rs876658348, rs876658431, rs876659326, rs876660444, rs730881369, rs878853865, rs753862052, rs587780024, rs138941496, rs886040739, rs886040744, rs886040347, rs878854957, rs886040123, rs398122662, rs886040942, rs1057517104, rs1057516320, rs1057516683, rs879254046, rs1057517253, rs587781927, rs985033810, rs1057519989, rs775464903, rs374230313, rs758304323, rs1060501599, rs758081262, rs1060500126, rs1060502734, rs587776408, rs1060501695, rs1114167816, rs1114167596, rs1114167667, rs1555460315, rs1135402788, rs1554086196, rs730881919, rs773356478, rs769237459, rs1553653158, rs587782087, rs1555107263, rs1555119940, rs1403784434, rs1342519012, rs751710099, rs1553616361, rs1553619721, rs1270783041, rs775036118, rs1555288557, rs1555460548, rs1555461154, rs1298667185, rs1553622218, rs63751101, rs1349928568, rs771936821, rs1021662947, rs1555921011, rs81002831, rs1555124506, rs1555574803, rs1060502716, rs1555605362, rs747057367, rs1565385010, rs1567554500, rs1567516230, rs1558644995, rs1555591308, rs778306619, rs1566231194, rs1603328466, rs1570406302, rs1586108714, rs768362387, rs1597713777, rs1060502926, rs1597867185, rs1591517571, rs1591663236, rs1593903006, rs1555284779, rs1597096243, rs45459799, rs1597360340, rs587781905, rs864622481, rs1601753141, rs1966858562, rs1966967065, rs1967016153, rs1967113484, rs2080473458, rs1591387978, rs1224428422, rs1597747184, rs2082309297, rs2051929740, rs147542208	21364753
Schizophrenia	Schizophrenia	rs74315508, rs74315509, rs13447324, rs1558507406, rs387906932, rs387906933, rs863223354, rs863223355, rs776061422, rs863223349, rs748809996, rs759748655, rs863223353, rs863223350, rs863223356, rs781821239, rs863223348, rs863223346, rs863223347, rs863223351, rs863223352, rs61734270, rs797045205, rs869312829, rs869312830, rs770913157, rs869312832, rs869312831, rs781720548, rs1262969313	26198764

Unknown
Disease name	Disease term	dbSNP ID	References
Amastia	Congenital absence of breast with absent nipple		24781087
Congenital absent nipple	Congenital absent nipple		24781087
Hypoplasia of nipple	Hypoplasia of nipple
Malignant mesothelioma	Malignant mesothelioma		25756049
Stomach neoplasms	Malignant neoplasm of stomach, Stomach Neoplasms		21364753
Stroke	Cerebrovascular accident		29531354