GediPNet logo

FLVCR2 (FLVCR choline and putative heme transporter 2)

Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
55640
Gene nameGene Name - the full gene name approved by the HGNC.
FLVCR choline and putative heme transporter 2
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
FLVCR2
SynonymsGene synonyms aliases
C14orf58, CCT, EPV, FLVCRL14q, MFSD7C, PVHH, SLC49A2
ChromosomeChromosome number
14
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
14q24.3
SummarySummary of gene provided in NCBI Entrez Gene.
This gene encodes a member of the major facilitator superfamily. The encoded transmembrane protein is a calcium transporter. Unlike the related protein feline leukemia virus subgroup C receptor 1, the protein encoded by this locus does not bind to feline
SNPsSNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs267606822 C>G,T Pathogenic Coding sequence variant, synonymous variant, missense variant
rs267606823 C>G Pathogenic, uncertain-significance Coding sequence variant, missense variant
rs267606824 C>T Pathogenic Coding sequence variant, missense variant
rs267606825 C>G,T Pathogenic Coding sequence variant, missense variant
rs757778790 G>A,C,T Likely-pathogenic Missense variant, coding sequence variant
miRNAmiRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT621324 hsa-miR-8485 HITS-CLIP 23824327
MIRT621323 hsa-miR-4643 HITS-CLIP 23824327
MIRT621322 hsa-miR-3166 HITS-CLIP 23824327
MIRT621321 hsa-miR-4771 HITS-CLIP 23824327
MIRT621320 hsa-miR-1273h-3p HITS-CLIP 23824327
Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0005886 Component Plasma membrane IEA
GO:0015232 Function Heme transmembrane transporter activity IBA 21873635
GO:0015232 Function Heme transmembrane transporter activity IDA 20823265
GO:0016021 Component Integral component of membrane IEA
GO:0020037 Function Heme binding IBA 21873635
Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM
HGNC
e!Ensembl
Protein
UniProt ID Q9UPI3
Protein name Choline/ethanolamine transporter FLVCR2 (Calcium-chelate transporter) (CCT) (Feline leukemia virus subgroup C receptor-related protein 2) (Heme transporter FLVCR2)
Protein function Choline uniporter that specifically mediates choline uptake at the blood-brain-barrier (PubMed:38302740, PubMed:38778100). Responsible for the majority of choline uptake across the blood-brain-barrier from the circulation into the brain (By simi
PDB 8QCX , 8QCY , 8QCZ , 8QD0
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF07690 MFS_1
87 454
Major Facilitator Superfamily
Family
Sequence
Sequence length 526
Interactions View interactions
Associated diseases
Causal
Disease name Disease term dbSNP ID References
Agenesis of corpus callosum Agenesis of corpus callosum rs754914260, rs1057519053, rs1057519056, rs1057519054, rs1057519055, rs1057519057, rs1384496494, rs1599017933
Akinesia Akinesia rs606231129, rs606231131, rs606231132, rs118203995, rs606231133, rs104894299, rs104894300, rs786200904, rs786200905, rs104894294, rs121909254, rs121909255, rs121909256, rs150376433, rs863223335, rs751889864, rs559933584, rs761899995, rs797045528, rs551423795, rs886037842, rs560525099, rs775583136, rs1349476281, rs794727884, rs1479498379, rs1555142142, rs1558010146, rs1558003446, rs1554757237, rs770987150, rs768892432, rs1558008455, rs1560224831, rs1558005340, rs747595523, rs1567568217, rs774070092, rs776532930, rs765096923, rs1560200925, rs201947904, rs1595903667, rs376573993, rs778172294, rs759488854, rs761584017, rs769850502
Developmental delay Global developmental delay rs28941770, rs199469464, rs281865469, rs143747297, rs398123009, rs587777428, rs786205133, rs606231459, rs797044854, rs797045027, rs864309504, rs878853160, rs886039902, rs886042046, rs886041291, rs886041382, rs1057518991, rs1057518699, rs753254213, rs748294403, rs762552974, rs1135401795, rs1553121073, rs1553122926, rs1364690005, rs1554086554, rs1554210415, rs1554168326, rs1554776342, rs1553873247, rs1567860112, rs779009256, rs1557447255, rs1564568350, rs780011005, rs1597464953, rs1200336864, rs1569513017, rs1587459606, rs1570332505, rs748888652, rs1575155995, rs2087029320, rs1589669105, rs1601769604, rs1184981709, rs749201074
Fowler syndrome Fowler syndrome rs267606825, rs746459536, rs267606822, rs138495705, rs267606823, rs267606824, rs780523767, rs759296326, rs1594785775 20206334
Unknown
Disease name Disease term dbSNP ID References
Cerebellar hypoplasia Cerebellar Hypoplasia
Dandy-walker syndrome Dandy-Walker Syndrome
Fowler vasculopaty Fowler vasculopaty
Hydranencephaly Hydranencephaly

| © 2021, Biomedical Informatics Centre, NIRRH |
ICMR-National Institute for Research in Reproductive Health, Jehangir Merwanji Street, Parel, Mumbai-400012
Tel: +91-22-24192104, Fax No: +91-22-24139412