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TRIM36 (tripartite motif containing 36)

Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
55521
Gene nameGene Name - the full gene name approved by the HGNC.
Tripartite motif containing 36
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
TRIM36
SynonymsGene synonyms aliases
ANPH, ANPH1, HAPRIN, RBCC728, RNF98
ChromosomeChromosome number
5
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
5q22.3
SummarySummary of gene provided in NCBI Entrez Gene.
The protein encoded by this gene is a member of the tripartite motif (TRIM) family. The TRIM motif includes three zinc-binding domains, a RING, a B-box type 1 and a B-box type 2, and a coiled-coil region. Multiple alternatively spliced transcript variants
SNPsSNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs773607884 G>T Pathogenic Coding sequence variant, non coding transcript variant, missense variant, genic downstream transcript variant
miRNAmiRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT021589 hsa-miR-142-3p Microarray 17612493
MIRT021747 hsa-miR-132-3p Microarray 17612493
MIRT021969 hsa-miR-128-3p Microarray 17612493
MIRT028267 hsa-miR-32-5p Sequencing 20371350
MIRT050046 hsa-miR-26b-5p CLASH 23622248
Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000209 Process Protein polyubiquitination TAS
GO:0000281 Process Mitotic cytokinesis IMP 28087737
GO:0001669 Component Acrosomal vesicle IEA
GO:0004842 Function Ubiquitin-protein transferase activity ISS
GO:0005515 Function Protein binding IPI 25416956, 32296183
Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM
HGNC
e!Ensembl
Protein
UniProt ID Q9NQ86
Protein name E3 ubiquitin-protein ligase TRIM36 (EC 2.3.2.27) (RING finger protein 98) (RING-type E3 ubiquitin transferase TRIM36) (Tripartite motif-containing protein 36) (Zinc-binding protein Rbcc728)
Protein function E3 ubiquitin-protein ligase which mediates ubiquitination and subsequent proteasomal degradation of target proteins. Involved in chromosome segregation and cell cycle regulation (PubMed:28087737). May play a role in the acrosome reaction and fer
PDB 7QS4
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF13445 zf-RING_UBOX
33 86
RING-type zinc-finger
Domain
PF00643 zf-B_box
207 249
B-box zinc finger
Domain
PF18568 COS
359 408
TRIM C-terminal subgroup One Signature domain
Domain
PF00041 fn3
426 500
Fibronectin type III domain
Domain
Sequence
MSESGEMSEFGYIMELIAKGKVTIKNIERELICPACKELFTHPLILPCQHSICHKCVKEL
LLTLDDSFNDVGSDNSNQSSPRLRLP
SPSMDKIDRINRPGWKRNSLTPRTTVFPCPGCEH
DVDLGERGINGLFRNFTLETIVERYRQAARAATAIMCDLCKPPPQESTKSCMDCSASYCN
ECFKIHHPWGTIKAQHEYVGPTTNFRPKILMCPEHETERINMYCELCRRPVCHLCKLGGN
HANHRVTTM
SSAYKTLKEKLSKDIDYLIGKESQVKSQISELNLLMKETECNGERAKEEAI
THFEKLFEVLEERKSSVLKAIDSSKKLRLDKFQTQMEEYQGLLENNGLVGYAQEVLKETD
QSCFVQTAKQLHLRIQKATESLKSFRPAAQTSFEDYVVNTSKQTELLG
ELSFFSSGIDVP
EINEEQSKVYNNALINWHHPEKDKADSYVLEYRKINRDDEMSWNEIEVCGTSKIIQDLEN
SSTYAFRVRAYKGSICSPCS
RELILHTPPAPVFSFLFDEKCGYNNEHLLLNLKRDRVESR
AGFNLLLAAERIQVGYYTSLDYIIGDTGITKGKHFWAFRVEPYSYLVKVGVASSDKLQEW
LRSPRDAVSPRYEQDSGHDSGSEDACFDSSQPFTLVTIGMQKFFIPKSPTSSNEPENRVL
PMPTSIGIFLDCDKGKVDFYDMDQMKCLYERQVDCSHTLYPAFALMGSGGIQLEEPITAK
YLEYQEDM
Sequence length 728
Interactions View interactions
PathwaysPathway information has different metabolic/signaling pathways associated with genes. Each record is hyperlinked to a complete information page which also includes links to the KEGG/Reactome pathway database.
 
Reactome
    Antigen processing: Ubiquitination & Proteasome degradation
Associated diseases
Causal
Disease name Disease term dbSNP ID References
Anencephaly Anencephaly rs773607884 28087737
Unknown
Disease name Disease term dbSNP ID References
Aprosencephaly Aprosencephaly
Incomplete anencephaly, hemicrania incomplete anencephaly, hemicrania
Spina bifida Spina Bifida

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