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LGR4 (leucine rich repeat containing G protein-coupled receptor 4)

Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
55366
Gene nameGene Name - the full gene name approved by the HGNC.
Leucine rich repeat containing G protein-coupled receptor 4
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
LGR4
SynonymsGene synonyms aliases
BNMD17, DPSL, GPR48
ChromosomeChromosome number
11
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
11p14.1
SummarySummary of gene provided in NCBI Entrez Gene.
The protein encoded by this gene is a G-protein coupled receptor that binds R-spondins and activates the Wnt signaling pathway. This Wnt signaling pathway activation is necessary for proper development of many organs of the body. [provided by RefSeq, Oct
miRNAmiRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT021855 hsa-miR-132-3p Microarray 17612493
MIRT026058 hsa-miR-196a-5p Sequencing 20371350
MIRT027834 hsa-miR-98-5p Microarray 19088304
MIRT721939 hsa-miR-449b-3p HITS-CLIP 19536157
MIRT721938 hsa-miR-4786-3p HITS-CLIP 19536157
Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0001649 Process Osteoblast differentiation ISS
GO:0001818 Process Negative regulation of cytokine production ISS
GO:0001942 Process Hair follicle development IEA
GO:0004888 Function Transmembrane signaling receptor activity IDA 21727895, 22815884
GO:0004930 Function G protein-coupled receptor activity IDA 22815884
Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM
HGNC
e!Ensembl
Protein
UniProt ID Q9BXB1
Protein name Leucine-rich repeat-containing G-protein coupled receptor 4 (G-protein coupled receptor 48)
Protein function Receptor for R-spondins that potentiates the canonical Wnt signaling pathway and is involved in the formation of various organs. Upon binding to R-spondins (RSPO1, RSPO2, RSPO3 or RSPO4), associates with phosphorylated LRP6 and frizzled receptor
PDB 4KT1 , 4QXE , 4QXF , 8WVU , 8WVV , 8WVW , 8WVX , 8WVY , 8XFP , 8XFS , 8XFT , 8XT9 , 8XUM , 8Y69
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01462 LRRNT
29 56
Leucine rich repeat N-terminal domain
Family
PF13855 LRR_8
59 117
Leucine rich repeat
Repeat
PF13855 LRR_8
105 165
Leucine rich repeat
Repeat
PF13855 LRR_8
177 237
Leucine rich repeat
Repeat
PF13855 LRR_8
248 307
Leucine rich repeat
Repeat
PF13855 LRR_8
319 377
Leucine rich repeat
Repeat
PF13855 LRR_8
365 425
Leucine rich repeat
Repeat
PF00001 7tm_1
555 801
7 transmembrane receptor (rhodopsin family)
Family
Sequence
MPGPLGLLCFLALGLLGSAGPSGAAPPLCAAPCSCDGDRRVDCSGKGLTAVPEGLSAFTQ
ALDISMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGL
KELKVLTLQNNQLKTV
PSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSL
TEVPVHPLSNLPTLQ
ALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDGLDNLETLDLNYNNL
GEF
PQAIKALPSLKELGFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHS
LVIRGAS
MVQQFPNLTGTVHLESLTLTGTKISSIPNNLCQEQKMLRTLDLSYNNIRDLPS
FNGC
HALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIHEIHSRAFATLGPITNLDV
SFNEL
TSFPTEGLNGLNQLKLVGNFKLKEALAAKDFVNLRSLSVPYAYQCCAFWGCDSYA
NLNTEDNSLQDHSVAQEKGTADAANVTSTLENEEHSQIIIHCTPSTGAFKPCEYLLGSWM
IRLTVWFIFLVALFFNLLVILTTFASCTSLPSSKLFIGLISVSNLFMGIYTGILTFLDAV
SWGRFAEFGIWWETGSGCKVAGFLAVFSSESAIFLLMLATVERSLSAKDIMKNGKSNHLK
QFRVAALLAFLGATVAGCFPLFHRGEYSASPLCLPFPTGETPSLGFTVTLVLLNSLAFLL
MAVIYTKLYCNLEKEDLSENSQSSMIKHVAWLIFTNCIFFCPVAFFSFAPLITAISISPE
IMKSVTLIFFPLPACLNPVLY
VFFNPKFKEDWKLLKRRVTKKSGSVSVSISSQGGCLEQD
FYYDCGMYSHLQGNLTVCDCCESFLLTKPVSCKHLIKSHSCPALAVASCQRPEGYWSDCG
TQSAHSDYADEEDSFVSDSSDQVQACGRACFYQSRGFPLVRYAYNLPRVKD
Sequence length 951
Interactions View interactions
PathwaysPathway information has different metabolic/signaling pathways associated with genes. Each record is hyperlinked to a complete information page which also includes links to the KEGG/Reactome pathway database.
 
KEGG
 
Reactome
  Wnt signaling pathway   Regulation of FZD by ubiquitination
Associated diseases
Unknown
Disease name Disease term dbSNP ID References
Alopecia Alopecia 28196072

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