ATG16L1 (autophagy related 16 like 1)

Gene

• Entrez ID: 55054
• Gene name: Autophagy related 16 like 1
• Gene symbol: ATG16L1
• Synonyms: APG16L, ATG16A, ATG16L, IBD10, WDR30
• Chromosome: 2
• Chromosome location: 2q37.1
• Summary: The protein encoded by this gene is part of a large protein complex that is necessary for autophagy, the major process by which intracellular components are targeted to lysosomes for degradation. Defects in this gene are a cause of susceptibility to infla

miRNA

miRTarBase ID	miRNA	Experiments	Reference
MIRT049399	hsa-miR-92a-3p	CLASH	23622248
MIRT048211	hsa-miR-196a-5p	CLASH	23622248
MIRT038607	hsa-miR-188-3p	CLASH	23622248
MIRT053623	hsa-miR-106b-5p	HeLa	24036151
MIRT053623	hsa-miR-106b-5p	HeLa	24036151
MIRT053624	hsa-miR-93-5p	HeLa	24036151
MIRT053624	hsa-miR-93-5p	HeLa	24036151
MIRT053623	hsa-miR-106b-5p	HITS-CLIP	22473208
MIRT157856	hsa-miR-142-3p	HITS-CLIP	22473208
MIRT087604	hsa-miR-20a-5p	HITS-CLIP	22473208
MIRT053623	hsa-miR-106b-5p	HITS-CLIP	22473208
MIRT157856	hsa-miR-142-3p	HITS-CLIP	22473208
MIRT087601	hsa-miR-17-5p	HITS-CLIP	22473208
MIRT087610	hsa-miR-20b-5p	HITS-CLIP	22473208
MIRT053624	hsa-miR-93-5p	HITS-CLIP	22473208
MIRT087614	hsa-miR-519d-3p	HITS-CLIP	22473208
MIRT087602	hsa-miR-19a-3p	HITS-CLIP	22473208
MIRT087603	hsa-miR-19b-3p	HITS-CLIP	22473208
MIRT087604	hsa-miR-20a-5p	HITS-CLIP	22473208
MIRT087604	hsa-miR-20a-5p	Immunofluorescence, Immunoprecipitaion, Luciferase reporter assay, qRT-PCR, Western blot	26165754
MIRT087604	hsa-miR-20a-5p	Immunofluorescence, Immunoprecipitaion, Luciferase reporter assay, qRT-PCR, Western blot	26165754
MIRT805210	hsa-let-7a	CLIP-seq
MIRT805211	hsa-let-7b	CLIP-seq
MIRT805212	hsa-let-7c	CLIP-seq
MIRT805213	hsa-let-7d	CLIP-seq
MIRT805214	hsa-let-7e	CLIP-seq
MIRT805215	hsa-let-7f	CLIP-seq
MIRT805216	hsa-let-7g	CLIP-seq
MIRT805217	hsa-let-7i	CLIP-seq
MIRT805218	hsa-miR-1244	CLIP-seq
MIRT805219	hsa-miR-1291	CLIP-seq
MIRT805220	hsa-miR-1294	CLIP-seq
MIRT805221	hsa-miR-1295	CLIP-seq
MIRT805222	hsa-miR-146b-3p	CLIP-seq
MIRT805223	hsa-miR-1914	CLIP-seq
MIRT805224	hsa-miR-202	CLIP-seq
MIRT805225	hsa-miR-3150b-3p	CLIP-seq
MIRT805226	hsa-miR-3202	CLIP-seq
MIRT805227	hsa-miR-325	CLIP-seq
MIRT805228	hsa-miR-3591-3p	CLIP-seq
MIRT805229	hsa-miR-3612	CLIP-seq
MIRT805230	hsa-miR-361-3p	CLIP-seq
MIRT805231	hsa-miR-3619-3p	CLIP-seq
MIRT805232	hsa-miR-3688-3p	CLIP-seq
MIRT805233	hsa-miR-3919	CLIP-seq
MIRT805234	hsa-miR-3925-5p	CLIP-seq
MIRT805235	hsa-miR-3974	CLIP-seq
MIRT805236	hsa-miR-4255	CLIP-seq
MIRT805237	hsa-miR-4443	CLIP-seq
MIRT805238	hsa-miR-4458	CLIP-seq
MIRT805239	hsa-miR-4493	CLIP-seq
MIRT805240	hsa-miR-4500	CLIP-seq
MIRT805241	hsa-miR-4533	CLIP-seq
MIRT805242	hsa-miR-4689	CLIP-seq
MIRT805243	hsa-miR-4695-5p	CLIP-seq
MIRT805244	hsa-miR-4710	CLIP-seq
MIRT805245	hsa-miR-4717-5p	CLIP-seq
MIRT805246	hsa-miR-4747-5p	CLIP-seq
MIRT805247	hsa-miR-4781-5p	CLIP-seq
MIRT805248	hsa-miR-4784	CLIP-seq
MIRT805249	hsa-miR-4792	CLIP-seq
MIRT805250	hsa-miR-493	CLIP-seq
MIRT805251	hsa-miR-650	CLIP-seq
MIRT805252	hsa-miR-744	CLIP-seq
MIRT805253	hsa-miR-98	CLIP-seq
MIRT805254	hsa-miR-106a	CLIP-seq
MIRT805255	hsa-miR-106b	CLIP-seq
MIRT805256	hsa-miR-130a	CLIP-seq
MIRT805257	hsa-miR-130b	CLIP-seq
MIRT805258	hsa-miR-142-5p	CLIP-seq
MIRT805259	hsa-miR-17	CLIP-seq
MIRT805260	hsa-miR-19a	CLIP-seq
MIRT805261	hsa-miR-19b	CLIP-seq
MIRT805262	hsa-miR-20a	CLIP-seq
MIRT805263	hsa-miR-20b	CLIP-seq
MIRT805264	hsa-miR-301a	CLIP-seq
MIRT805265	hsa-miR-301b	CLIP-seq
MIRT805266	hsa-miR-3609	CLIP-seq
MIRT805267	hsa-miR-3666	CLIP-seq
MIRT805268	hsa-miR-4295	CLIP-seq
MIRT805269	hsa-miR-454	CLIP-seq
MIRT805270	hsa-miR-4796-3p	CLIP-seq
MIRT805271	hsa-miR-519a	CLIP-seq
MIRT805272	hsa-miR-519b-3p	CLIP-seq
MIRT805273	hsa-miR-519c-3p	CLIP-seq
MIRT805274	hsa-miR-519d	CLIP-seq
MIRT805275	hsa-miR-548ah	CLIP-seq
MIRT805276	hsa-miR-548n	CLIP-seq
MIRT805277	hsa-miR-548t	CLIP-seq
MIRT805278	hsa-miR-93	CLIP-seq
MIRT805279	hsa-miR-3187-3p	CLIP-seq
MIRT805280	hsa-miR-3926	CLIP-seq
MIRT805281	hsa-miR-4435	CLIP-seq
MIRT805282	hsa-miR-4701-5p	CLIP-seq
MIRT805283	hsa-miR-4803	CLIP-seq
MIRT805284	hsa-miR-548s	CLIP-seq
MIRT805285	hsa-miR-588	CLIP-seq
MIRT805286	hsa-miR-1321	CLIP-seq
MIRT805258	hsa-miR-142-5p	CLIP-seq
MIRT805287	hsa-miR-181a	CLIP-seq
MIRT805288	hsa-miR-181b	CLIP-seq
MIRT805289	hsa-miR-181c	CLIP-seq
MIRT805290	hsa-miR-181d	CLIP-seq
MIRT805291	hsa-miR-214	CLIP-seq
MIRT805292	hsa-miR-3137	CLIP-seq
MIRT805293	hsa-miR-3619-5p	CLIP-seq
MIRT805294	hsa-miR-4262	CLIP-seq
MIRT805295	hsa-miR-4270	CLIP-seq
MIRT805296	hsa-miR-4291	CLIP-seq
MIRT805297	hsa-miR-4441	CLIP-seq
MIRT805298	hsa-miR-4703-3p	CLIP-seq
MIRT805299	hsa-miR-4728-5p	CLIP-seq
MIRT805300	hsa-miR-4733-3p	CLIP-seq
MIRT805301	hsa-miR-4739	CLIP-seq
MIRT805302	hsa-miR-4756-5p	CLIP-seq
MIRT805303	hsa-miR-642b	CLIP-seq
MIRT805304	hsa-miR-7	CLIP-seq
MIRT805305	hsa-miR-761	CLIP-seq
MIRT805306	hsa-miR-922	CLIP-seq
MIRT805210	hsa-let-7a	CLIP-seq
MIRT805211	hsa-let-7b	CLIP-seq
MIRT805212	hsa-let-7c	CLIP-seq
MIRT805213	hsa-let-7d	CLIP-seq
MIRT805214	hsa-let-7e	CLIP-seq
MIRT805215	hsa-let-7f	CLIP-seq
MIRT805216	hsa-let-7g	CLIP-seq
MIRT805217	hsa-let-7i	CLIP-seq
MIRT805218	hsa-miR-1244	CLIP-seq
MIRT1937764	hsa-miR-1257	CLIP-seq
MIRT805219	hsa-miR-1291	CLIP-seq
MIRT805220	hsa-miR-1294	CLIP-seq
MIRT805221	hsa-miR-1295	CLIP-seq
MIRT1937765	hsa-miR-1302	CLIP-seq
MIRT1937766	hsa-miR-1305	CLIP-seq
MIRT805286	hsa-miR-1321	CLIP-seq
MIRT805222	hsa-miR-146b-3p	CLIP-seq
MIRT805287	hsa-miR-181a	CLIP-seq
MIRT805288	hsa-miR-181b	CLIP-seq
MIRT805289	hsa-miR-181c	CLIP-seq
MIRT805290	hsa-miR-181d	CLIP-seq
MIRT1937767	hsa-miR-191	CLIP-seq
MIRT805223	hsa-miR-1914	CLIP-seq
MIRT805224	hsa-miR-202	CLIP-seq
MIRT1937768	hsa-miR-218	CLIP-seq
MIRT1937769	hsa-miR-2467-3p	CLIP-seq
MIRT1937770	hsa-miR-3122	CLIP-seq
MIRT805292	hsa-miR-3137	CLIP-seq
MIRT1937771	hsa-miR-3147	CLIP-seq
MIRT805225	hsa-miR-3150b-3p	CLIP-seq
MIRT805226	hsa-miR-3202	CLIP-seq
MIRT805227	hsa-miR-325	CLIP-seq
MIRT805230	hsa-miR-361-3p	CLIP-seq
MIRT1937772	hsa-miR-3646	CLIP-seq
MIRT805232	hsa-miR-3688-3p	CLIP-seq
MIRT1937773	hsa-miR-3913-5p	CLIP-seq
MIRT805235	hsa-miR-3974	CLIP-seq
MIRT805236	hsa-miR-4255	CLIP-seq
MIRT805294	hsa-miR-4262	CLIP-seq
MIRT805295	hsa-miR-4270	CLIP-seq
MIRT1937774	hsa-miR-4298	CLIP-seq
MIRT1937775	hsa-miR-4303	CLIP-seq
MIRT1937776	hsa-miR-4325	CLIP-seq
MIRT1937777	hsa-miR-4422	CLIP-seq
MIRT1937778	hsa-miR-4425	CLIP-seq
MIRT1937779	hsa-miR-4426	CLIP-seq
MIRT805297	hsa-miR-4441	CLIP-seq
MIRT805238	hsa-miR-4458	CLIP-seq
MIRT805240	hsa-miR-4500	CLIP-seq
MIRT805241	hsa-miR-4533	CLIP-seq
MIRT1937780	hsa-miR-4647	CLIP-seq
MIRT1937781	hsa-miR-4662b	CLIP-seq
MIRT805242	hsa-miR-4689	CLIP-seq
MIRT805243	hsa-miR-4695-5p	CLIP-seq
MIRT805298	hsa-miR-4703-3p	CLIP-seq
MIRT805244	hsa-miR-4710	CLIP-seq
MIRT805245	hsa-miR-4717-5p	CLIP-seq
MIRT805299	hsa-miR-4728-5p	CLIP-seq
MIRT805300	hsa-miR-4733-3p	CLIP-seq
MIRT805301	hsa-miR-4739	CLIP-seq
MIRT805302	hsa-miR-4756-5p	CLIP-seq
MIRT1937782	hsa-miR-4761-5p	CLIP-seq
MIRT805247	hsa-miR-4781-5p	CLIP-seq
MIRT805248	hsa-miR-4784	CLIP-seq
MIRT805249	hsa-miR-4792	CLIP-seq
MIRT805250	hsa-miR-493	CLIP-seq
MIRT1937783	hsa-miR-576-3p	CLIP-seq
MIRT1937784	hsa-miR-636	CLIP-seq
MIRT805303	hsa-miR-642b	CLIP-seq
MIRT1937785	hsa-miR-652	CLIP-seq
MIRT805252	hsa-miR-744	CLIP-seq
MIRT805253	hsa-miR-98	CLIP-seq
MIRT805210	hsa-let-7a	CLIP-seq
MIRT805211	hsa-let-7b	CLIP-seq
MIRT805212	hsa-let-7c	CLIP-seq
MIRT805213	hsa-let-7d	CLIP-seq
MIRT805214	hsa-let-7e	CLIP-seq
MIRT805215	hsa-let-7f	CLIP-seq
MIRT805216	hsa-let-7g	CLIP-seq
MIRT805217	hsa-let-7i	CLIP-seq
MIRT805254	hsa-miR-106a	CLIP-seq
MIRT805255	hsa-miR-106b	CLIP-seq
MIRT2177235	hsa-miR-1205	CLIP-seq
MIRT2177236	hsa-miR-1207-5p	CLIP-seq
MIRT805218	hsa-miR-1244	CLIP-seq
MIRT1937764	hsa-miR-1257	CLIP-seq
MIRT2177237	hsa-miR-1267	CLIP-seq
MIRT2177238	hsa-miR-1271	CLIP-seq
MIRT2177239	hsa-miR-1277	CLIP-seq
MIRT805219	hsa-miR-1291	CLIP-seq
MIRT805220	hsa-miR-1294	CLIP-seq
MIRT1937766	hsa-miR-1305	CLIP-seq
MIRT805286	hsa-miR-1321	CLIP-seq
MIRT2177240	hsa-miR-139-5p	CLIP-seq
MIRT2177241	hsa-miR-141	CLIP-seq
MIRT805222	hsa-miR-146b-3p	CLIP-seq
MIRT805259	hsa-miR-17	CLIP-seq
MIRT2177242	hsa-miR-188-5p	CLIP-seq
MIRT1937767	hsa-miR-191	CLIP-seq
MIRT805223	hsa-miR-1914	CLIP-seq
MIRT2177243	hsa-miR-200a	CLIP-seq
MIRT805224	hsa-miR-202	CLIP-seq
MIRT805262	hsa-miR-20a	CLIP-seq
MIRT805263	hsa-miR-20b	CLIP-seq
MIRT2177244	hsa-miR-2117	CLIP-seq
MIRT1937768	hsa-miR-218	CLIP-seq
MIRT2177245	hsa-miR-29a	CLIP-seq
MIRT2177246	hsa-miR-29b	CLIP-seq
MIRT2177247	hsa-miR-29c	CLIP-seq
MIRT2177248	hsa-miR-31	CLIP-seq
MIRT2177249	hsa-miR-3135	CLIP-seq
MIRT805292	hsa-miR-3137	CLIP-seq
MIRT805225	hsa-miR-3150b-3p	CLIP-seq
MIRT2177250	hsa-miR-3173-5p	CLIP-seq
MIRT2177251	hsa-miR-3174	CLIP-seq
MIRT2177252	hsa-miR-3176	CLIP-seq
MIRT805279	hsa-miR-3187-3p	CLIP-seq
MIRT805226	hsa-miR-3202	CLIP-seq
MIRT805227	hsa-miR-325	CLIP-seq
MIRT805266	hsa-miR-3609	CLIP-seq
MIRT805229	hsa-miR-3612	CLIP-seq
MIRT805230	hsa-miR-361-3p	CLIP-seq
MIRT2177253	hsa-miR-3616-3p	CLIP-seq
MIRT805231	hsa-miR-3619-3p	CLIP-seq
MIRT1937772	hsa-miR-3646	CLIP-seq
MIRT2177254	hsa-miR-3665	CLIP-seq
MIRT805232	hsa-miR-3688-3p	CLIP-seq
MIRT2177255	hsa-miR-383	CLIP-seq
MIRT805233	hsa-miR-3919	CLIP-seq
MIRT2177256	hsa-miR-3922-3p	CLIP-seq
MIRT805234	hsa-miR-3925-5p	CLIP-seq
MIRT805280	hsa-miR-3926	CLIP-seq
MIRT805235	hsa-miR-3974	CLIP-seq
MIRT805236	hsa-miR-4255	CLIP-seq
MIRT2177257	hsa-miR-4264	CLIP-seq
MIRT2177258	hsa-miR-4269	CLIP-seq
MIRT805295	hsa-miR-4270	CLIP-seq
MIRT2177259	hsa-miR-4276	CLIP-seq
MIRT2177260	hsa-miR-4302	CLIP-seq
MIRT1937775	hsa-miR-4303	CLIP-seq
MIRT1937776	hsa-miR-4325	CLIP-seq
MIRT1937777	hsa-miR-4422	CLIP-seq
MIRT1937779	hsa-miR-4426	CLIP-seq
MIRT805281	hsa-miR-4435	CLIP-seq
MIRT2177261	hsa-miR-4436b-3p	CLIP-seq
MIRT805297	hsa-miR-4441	CLIP-seq
MIRT805237	hsa-miR-4443	CLIP-seq
MIRT805238	hsa-miR-4458	CLIP-seq
MIRT805240	hsa-miR-4500	CLIP-seq
MIRT2177262	hsa-miR-4514	CLIP-seq
MIRT805241	hsa-miR-4533	CLIP-seq
MIRT2177263	hsa-miR-455-5p	CLIP-seq
MIRT2177264	hsa-miR-4639-5p	CLIP-seq
MIRT1937780	hsa-miR-4647	CLIP-seq
MIRT2177265	hsa-miR-4652-3p	CLIP-seq
MIRT1937781	hsa-miR-4662b	CLIP-seq
MIRT805242	hsa-miR-4689	CLIP-seq
MIRT2177266	hsa-miR-4692	CLIP-seq
MIRT805243	hsa-miR-4695-5p	CLIP-seq
MIRT2177267	hsa-miR-4699-3p	CLIP-seq
MIRT805282	hsa-miR-4701-5p	CLIP-seq
MIRT805298	hsa-miR-4703-3p	CLIP-seq
MIRT2177268	hsa-miR-4704-3p	CLIP-seq
MIRT805244	hsa-miR-4710	CLIP-seq
MIRT2177269	hsa-miR-4720-3p	CLIP-seq
MIRT805299	hsa-miR-4728-5p	CLIP-seq
MIRT805300	hsa-miR-4733-3p	CLIP-seq
MIRT2177270	hsa-miR-4736	CLIP-seq
MIRT805301	hsa-miR-4739	CLIP-seq
MIRT2177271	hsa-miR-4742-5p	CLIP-seq
MIRT805302	hsa-miR-4756-5p	CLIP-seq
MIRT2177272	hsa-miR-4762-5p	CLIP-seq
MIRT2177273	hsa-miR-4763-3p	CLIP-seq
MIRT2177274	hsa-miR-4772-5p	CLIP-seq
MIRT2177275	hsa-miR-4780	CLIP-seq
MIRT805247	hsa-miR-4781-5p	CLIP-seq
MIRT805248	hsa-miR-4784	CLIP-seq
MIRT805249	hsa-miR-4792	CLIP-seq
MIRT2177276	hsa-miR-4795-3p	CLIP-seq
MIRT805270	hsa-miR-4796-3p	CLIP-seq
MIRT805283	hsa-miR-4803	CLIP-seq
MIRT2177277	hsa-miR-4804-3p	CLIP-seq
MIRT805250	hsa-miR-493	CLIP-seq
MIRT805274	hsa-miR-519d	CLIP-seq
MIRT2177278	hsa-miR-548a-3p	CLIP-seq
MIRT805275	hsa-miR-548ah	CLIP-seq
MIRT2177279	hsa-miR-548al	CLIP-seq
MIRT2177280	hsa-miR-548b-3p	CLIP-seq
MIRT2177281	hsa-miR-548e	CLIP-seq
MIRT2177282	hsa-miR-548f	CLIP-seq
MIRT805284	hsa-miR-548s	CLIP-seq
MIRT2177283	hsa-miR-548v	CLIP-seq
MIRT1937783	hsa-miR-576-3p	CLIP-seq
MIRT805285	hsa-miR-588	CLIP-seq
MIRT2177284	hsa-miR-605	CLIP-seq
MIRT2177285	hsa-miR-623	CLIP-seq
MIRT1937784	hsa-miR-636	CLIP-seq
MIRT2177286	hsa-miR-645	CLIP-seq
MIRT805251	hsa-miR-650	CLIP-seq
MIRT1937785	hsa-miR-652	CLIP-seq
MIRT805252	hsa-miR-744	CLIP-seq
MIRT2177287	hsa-miR-769-5p	CLIP-seq
MIRT2177288	hsa-miR-874	CLIP-seq
MIRT805278	hsa-miR-93	CLIP-seq
MIRT2177289	hsa-miR-940	CLIP-seq
MIRT2177290	hsa-miR-96	CLIP-seq
MIRT805253	hsa-miR-98	CLIP-seq
MIRT805210	hsa-let-7a	CLIP-seq
MIRT805211	hsa-let-7b	CLIP-seq
MIRT805212	hsa-let-7c	CLIP-seq
MIRT805213	hsa-let-7d	CLIP-seq
MIRT805214	hsa-let-7e	CLIP-seq
MIRT805215	hsa-let-7f	CLIP-seq
MIRT805216	hsa-let-7g	CLIP-seq
MIRT805217	hsa-let-7i	CLIP-seq
MIRT805254	hsa-miR-106a	CLIP-seq
MIRT805255	hsa-miR-106b	CLIP-seq
MIRT2177235	hsa-miR-1205	CLIP-seq
MIRT2480720	hsa-miR-1224-3p	CLIP-seq
MIRT2480721	hsa-miR-1237	CLIP-seq
MIRT2177239	hsa-miR-1277	CLIP-seq
MIRT2480722	hsa-miR-1286	CLIP-seq
MIRT805219	hsa-miR-1291	CLIP-seq
MIRT805220	hsa-miR-1294	CLIP-seq
MIRT805256	hsa-miR-130a	CLIP-seq
MIRT805257	hsa-miR-130b	CLIP-seq
MIRT2480723	hsa-miR-1324	CLIP-seq
MIRT2177241	hsa-miR-141	CLIP-seq
MIRT805258	hsa-miR-142-5p	CLIP-seq
MIRT805222	hsa-miR-146b-3p	CLIP-seq
MIRT805259	hsa-miR-17	CLIP-seq
MIRT2177242	hsa-miR-188-5p	CLIP-seq
MIRT1937767	hsa-miR-191	CLIP-seq
MIRT2480724	hsa-miR-1912	CLIP-seq
MIRT805223	hsa-miR-1914	CLIP-seq
MIRT2480725	hsa-miR-197	CLIP-seq
MIRT2480726	hsa-miR-198	CLIP-seq
MIRT805260	hsa-miR-19a	CLIP-seq
MIRT805261	hsa-miR-19b	CLIP-seq
MIRT2177243	hsa-miR-200a	CLIP-seq
MIRT805224	hsa-miR-202	CLIP-seq
MIRT805262	hsa-miR-20a	CLIP-seq
MIRT805263	hsa-miR-20b	CLIP-seq
MIRT1937768	hsa-miR-218	CLIP-seq
MIRT1937769	hsa-miR-2467-3p	CLIP-seq
MIRT2177245	hsa-miR-29a	CLIP-seq
MIRT2177246	hsa-miR-29b	CLIP-seq
MIRT2177247	hsa-miR-29c	CLIP-seq
MIRT805264	hsa-miR-301a	CLIP-seq
MIRT805265	hsa-miR-301b	CLIP-seq
MIRT2480727	hsa-miR-3064-3p	CLIP-seq
MIRT2480728	hsa-miR-3130-5p	CLIP-seq
MIRT2177249	hsa-miR-3135	CLIP-seq
MIRT805225	hsa-miR-3150b-3p	CLIP-seq
MIRT2480729	hsa-miR-3182	CLIP-seq
MIRT2480730	hsa-miR-3184	CLIP-seq
MIRT2480731	hsa-miR-3192	CLIP-seq
MIRT805226	hsa-miR-3202	CLIP-seq
MIRT2480732	hsa-miR-326	CLIP-seq
MIRT2480733	hsa-miR-330-5p	CLIP-seq
MIRT805266	hsa-miR-3609	CLIP-seq
MIRT805230	hsa-miR-361-3p	CLIP-seq
MIRT2480734	hsa-miR-3622a-3p	CLIP-seq
MIRT2480735	hsa-miR-3622b-3p	CLIP-seq
MIRT805267	hsa-miR-3666	CLIP-seq
MIRT805232	hsa-miR-3688-3p	CLIP-seq
MIRT2480736	hsa-miR-3689a-3p	CLIP-seq
MIRT2480737	hsa-miR-3689c	CLIP-seq
MIRT2480738	hsa-miR-3689d	CLIP-seq
MIRT805233	hsa-miR-3919	CLIP-seq
MIRT805234	hsa-miR-3925-5p	CLIP-seq
MIRT805235	hsa-miR-3974	CLIP-seq
MIRT2480739	hsa-miR-423-5p	CLIP-seq
MIRT805268	hsa-miR-4295	CLIP-seq
MIRT2177260	hsa-miR-4302	CLIP-seq
MIRT1937775	hsa-miR-4303	CLIP-seq
MIRT2480740	hsa-miR-4314	CLIP-seq
MIRT1937776	hsa-miR-4325	CLIP-seq
MIRT1937777	hsa-miR-4422	CLIP-seq
MIRT1937779	hsa-miR-4426	CLIP-seq
MIRT805281	hsa-miR-4435	CLIP-seq
MIRT2480741	hsa-miR-4436a	CLIP-seq
MIRT2480742	hsa-miR-4438	CLIP-seq
MIRT805237	hsa-miR-4443	CLIP-seq
MIRT2480743	hsa-miR-4446-3p	CLIP-seq
MIRT2480744	hsa-miR-4453	CLIP-seq
MIRT2480745	hsa-miR-4455	CLIP-seq
MIRT805238	hsa-miR-4458	CLIP-seq
MIRT2480746	hsa-miR-4482	CLIP-seq
MIRT805240	hsa-miR-4500	CLIP-seq
MIRT805241	hsa-miR-4533	CLIP-seq
MIRT2480747	hsa-miR-4538	CLIP-seq
MIRT805269	hsa-miR-454	CLIP-seq
MIRT2480748	hsa-miR-4641	CLIP-seq
MIRT2480749	hsa-miR-4646-5p	CLIP-seq
MIRT1937780	hsa-miR-4647	CLIP-seq
MIRT2480750	hsa-miR-4649-3p	CLIP-seq
MIRT2480751	hsa-miR-4659a-3p	CLIP-seq
MIRT2480752	hsa-miR-4659b-3p	CLIP-seq
MIRT1937781	hsa-miR-4662b	CLIP-seq
MIRT805242	hsa-miR-4689	CLIP-seq
MIRT805243	hsa-miR-4695-5p	CLIP-seq
MIRT805244	hsa-miR-4710	CLIP-seq
MIRT2480753	hsa-miR-4722-3p	CLIP-seq
MIRT2480754	hsa-miR-4722-5p	CLIP-seq
MIRT805299	hsa-miR-4728-5p	CLIP-seq
MIRT2480755	hsa-miR-4755-3p	CLIP-seq
MIRT2480756	hsa-miR-4761-3p	CLIP-seq
MIRT2480757	hsa-miR-4778-3p	CLIP-seq
MIRT2480758	hsa-miR-4779	CLIP-seq
MIRT2177275	hsa-miR-4780	CLIP-seq
MIRT2480759	hsa-miR-4781-3p	CLIP-seq
MIRT805247	hsa-miR-4781-5p	CLIP-seq
MIRT805248	hsa-miR-4784	CLIP-seq
MIRT805249	hsa-miR-4792	CLIP-seq
MIRT805270	hsa-miR-4796-3p	CLIP-seq
MIRT805250	hsa-miR-493	CLIP-seq
MIRT2480760	hsa-miR-499-3p	CLIP-seq
MIRT2480761	hsa-miR-499a-3p	CLIP-seq
MIRT805271	hsa-miR-519a	CLIP-seq
MIRT805272	hsa-miR-519b-3p	CLIP-seq
MIRT805273	hsa-miR-519c-3p	CLIP-seq
MIRT805274	hsa-miR-519d	CLIP-seq
MIRT2480762	hsa-miR-520a-5p	CLIP-seq
MIRT2480763	hsa-miR-525-5p	CLIP-seq
MIRT2177278	hsa-miR-548a-3p	CLIP-seq
MIRT805275	hsa-miR-548ah	CLIP-seq
MIRT2177281	hsa-miR-548e	CLIP-seq
MIRT2177282	hsa-miR-548f	CLIP-seq
MIRT805276	hsa-miR-548n	CLIP-seq
MIRT805277	hsa-miR-548t	CLIP-seq
MIRT2480764	hsa-miR-567	CLIP-seq
MIRT2480765	hsa-miR-577	CLIP-seq
MIRT2480766	hsa-miR-609	CLIP-seq
MIRT2177285	hsa-miR-623	CLIP-seq
MIRT1937784	hsa-miR-636	CLIP-seq
MIRT2177286	hsa-miR-645	CLIP-seq
MIRT2480767	hsa-miR-648	CLIP-seq
MIRT1937785	hsa-miR-652	CLIP-seq
MIRT805304	hsa-miR-7	CLIP-seq
MIRT805252	hsa-miR-744	CLIP-seq
MIRT805278	hsa-miR-93	CLIP-seq
MIRT2480768	hsa-miR-942	CLIP-seq
MIRT805253	hsa-miR-98	CLIP-seq
MIRT805254	hsa-miR-106a	CLIP-seq
MIRT805255	hsa-miR-106b	CLIP-seq
MIRT805219	hsa-miR-1291	CLIP-seq
MIRT805256	hsa-miR-130a	CLIP-seq
MIRT805257	hsa-miR-130b	CLIP-seq
MIRT2480723	hsa-miR-1324	CLIP-seq
MIRT2177241	hsa-miR-141	CLIP-seq
MIRT805258	hsa-miR-142-5p	CLIP-seq
MIRT805222	hsa-miR-146b-3p	CLIP-seq
MIRT805259	hsa-miR-17	CLIP-seq
MIRT1937767	hsa-miR-191	CLIP-seq
MIRT805223	hsa-miR-1914	CLIP-seq
MIRT2480725	hsa-miR-197	CLIP-seq
MIRT2480726	hsa-miR-198	CLIP-seq
MIRT805260	hsa-miR-19a	CLIP-seq
MIRT805261	hsa-miR-19b	CLIP-seq
MIRT2177243	hsa-miR-200a	CLIP-seq
MIRT805262	hsa-miR-20a	CLIP-seq
MIRT805263	hsa-miR-20b	CLIP-seq
MIRT1937768	hsa-miR-218	CLIP-seq
MIRT1937769	hsa-miR-2467-3p	CLIP-seq
MIRT2177245	hsa-miR-29a	CLIP-seq
MIRT2177246	hsa-miR-29b	CLIP-seq
MIRT2177247	hsa-miR-29c	CLIP-seq
MIRT805264	hsa-miR-301a	CLIP-seq
MIRT805265	hsa-miR-301b	CLIP-seq
MIRT2177249	hsa-miR-3135	CLIP-seq
MIRT805225	hsa-miR-3150b-3p	CLIP-seq
MIRT2480730	hsa-miR-3184	CLIP-seq
MIRT805266	hsa-miR-3609	CLIP-seq
MIRT805267	hsa-miR-3666	CLIP-seq
MIRT805233	hsa-miR-3919	CLIP-seq
MIRT805234	hsa-miR-3925-5p	CLIP-seq
MIRT2480739	hsa-miR-423-5p	CLIP-seq
MIRT805268	hsa-miR-4295	CLIP-seq
MIRT2177260	hsa-miR-4302	CLIP-seq
MIRT1937775	hsa-miR-4303	CLIP-seq
MIRT1937776	hsa-miR-4325	CLIP-seq
MIRT1937777	hsa-miR-4422	CLIP-seq
MIRT1937779	hsa-miR-4426	CLIP-seq
MIRT805281	hsa-miR-4435	CLIP-seq
MIRT2480742	hsa-miR-4438	CLIP-seq
MIRT805269	hsa-miR-454	CLIP-seq
MIRT1937780	hsa-miR-4647	CLIP-seq
MIRT1937781	hsa-miR-4662b	CLIP-seq
MIRT805242	hsa-miR-4689	CLIP-seq
MIRT805243	hsa-miR-4695-5p	CLIP-seq
MIRT805244	hsa-miR-4710	CLIP-seq
MIRT2480756	hsa-miR-4761-3p	CLIP-seq
MIRT805247	hsa-miR-4781-5p	CLIP-seq
MIRT805248	hsa-miR-4784	CLIP-seq
MIRT805249	hsa-miR-4792	CLIP-seq
MIRT805270	hsa-miR-4796-3p	CLIP-seq
MIRT805271	hsa-miR-519a	CLIP-seq
MIRT805272	hsa-miR-519b-3p	CLIP-seq
MIRT805273	hsa-miR-519c-3p	CLIP-seq
MIRT805274	hsa-miR-519d	CLIP-seq
MIRT2480762	hsa-miR-520a-5p	CLIP-seq
MIRT2480763	hsa-miR-525-5p	CLIP-seq
MIRT805275	hsa-miR-548ah	CLIP-seq
MIRT2480766	hsa-miR-609	CLIP-seq
MIRT1937784	hsa-miR-636	CLIP-seq
MIRT2177286	hsa-miR-645	CLIP-seq
MIRT2480767	hsa-miR-648	CLIP-seq
MIRT1937785	hsa-miR-652	CLIP-seq
MIRT805304	hsa-miR-7	CLIP-seq
MIRT805252	hsa-miR-744	CLIP-seq
MIRT805278	hsa-miR-93	CLIP-seq
MIRT805266	hsa-miR-3609	CLIP-seq
MIRT805275	hsa-miR-548ah	CLIP-seq

Gene ontology (GO)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000045	Process	Autophagosome assembly	IBA	21873635
GO:0000045	Process	Autophagosome assembly	NAS	15620219
GO:0000421	Component	Autophagosome membrane	IBA	21873635
GO:0005515	Function	Protein binding	IPI	20562859, 23202584, 23262492, 23376921, 23392225, 26347139, 28561066, 32296183
GO:0005776	Component	Autophagosome	ISS	15620219
GO:0005829	Component	Cytosol	TAS
GO:0005930	Component	Axoneme	ISS
GO:0015031	Process	Protein transport	IEA
GO:0016236	Process	Macroautophagy	TAS
GO:0018215	Process	Protein phosphopantetheinylation	IEA
GO:0019787	Function	Ubiquitin-like protein transferase activity	TAS
GO:0034045	Component	Phagophore assembly site membrane	IEA
GO:0039689	Process	Negative stranded viral RNA replication	IBA	21873635
GO:0042802	Function	Identical protein binding	IPI	20562859, 23392225
GO:0051020	Function	GTPase binding	IPI	25891078

Other IDs

• MIM: 610767
• HGNC: 21498
• e!Ensembl: ENSG00000085978

Protein

• UniProt ID: Q676U5
• Protein name: Autophagy-related protein 16-1 (APG16-like 1)
• Protein function: Plays an essential role in both canonical and non-canonical autophagy: interacts with ATG12-ATG5 to mediate the lipidation to ATG8 family proteins (MAP1LC3A, MAP1LC3B, MAP1LC3C, GABARAPL1, GABARAPL2 and GABARAP) (PubMed:23376921, PubMed:23392225
• PDB: 4GDK, 4GDL, 4NAW, 4TQ0, 5D7G, 5NPV, 5NPW, 5NUV, 5ZYX, 7F69, 7W36, 7XFR, 8ZQG
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF08614	ATG16	16 → 206	Autophagy protein 16 (ATG16)	Coiled-coil
  PF00400	WD40	313 → 350	WD domain, G-beta repeat	Repeat
  PF00400	WD40	356 → 394	WD domain, G-beta repeat	Repeat
  PF00400	WD40	398 → 436	WD domain, G-beta repeat	Repeat
  PF00400	WD40	523 → 562	WD domain, G-beta repeat	Repeat
  PF00400	WD40	566 → 604	WD domain, G-beta repeat	Repeat

• Sequence:

  MSSGLRAADFPRWKRHISEQLRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAQKLQAEK
  HDVPNRHEISPGHDGTWNDNQLQEMAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQRK
  DREMQMNEAKIAECLQTISDLETECLDLRTKLCDLERANQTLKDEYDALQITFTALEGKL
  RKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDI
  EVIVDETSDHTEETSPVRAISRAATKRLSQPAGGLLDSITNIFGRRSVSSFPVPQDNVDT
  HPGSGKEVRVPATALCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGEKCEFKG
  SLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDN
  ARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSES
  IVREMELLGKITALDLNPERTELLSCSRDDLLKVIDLRTNAIKQTFSAPGFKCGSDWTRV
  VFSPDGSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSGSHVVSVDKGCK
  AVLWAQY

• Sequence length: 607

Pathways

KEGG:

Autophagy - other
Autophagy - animal
NOD-like receptor signaling pathway
Shigellosis

Reactome:

Macroautophagy

Associated diseases

Causal
Disease name	Disease term	dbSNP ID	References
Arthritis	Juvenile arthritis	rs1594890601, rs1594882933, rs184370809, rs776489319, rs1594883470	26301688
Asthma	Asthma	rs324981, rs121912630, rs150116809, rs4950928, rs708494, rs1581842283	21150878
Autoimmune diseases	Autoimmune Diseases, AUTOIMMUNE DISEASE, MULTISYSTEM, INFANTILE-ONSET, 1, AUTOIMMUNE DISEASE, MULTISYSTEM, INFANTILE-ONSET, 2	rs41285370, rs869025224	26301688
Common variable immunodeficiency	Common Variable Immunodeficiency	rs72553883, rs121908379, rs104894650, rs587776775, rs398122863, rs398122864, rs397514332, rs397514331, rs727502786, rs727502787, rs72553882, rs869320688, rs869320689, rs869320754, rs773694113, rs1553319504, rs201017642, rs1555550717, rs1558192723, rs1030733127, rs749636258, rs185689791, rs1559035937, rs1565214594, rs1560679469, rs1560711146, rs1569376229, rs1578790573, rs939459600, rs1572952530, rs1572950925, rs772481080, rs369363360, rs72553885, rs72553879, rs1265262160, rs1303637368, rs757598952, rs1016142312, rs1578771120, rs1578771197, rs1578793298, rs1578793312, rs1578809101, rs1578811073, rs1590715754, rs144718007, rs759649059, rs1723945421, rs2061279365	26301688
Diabetes mellitus	Diabetes Mellitus, Insulin-Dependent	rs587776515, rs61730328, rs606231121, rs606231122, rs79020217, rs77625743, rs78378398, rs606231123, rs4402960, rs1362648752, rs3745368, rs3792267, rs3842570, rs5030952, rs2975760, rs119489103, rs7903146, rs12255372, rs11196205, rs104893649, rs80356624, rs80356616, rs80356625, rs80356611, rs104894237, rs80356613, rs137852740, rs137852786, rs387906407, rs151344623, rs28938469, rs28936371, rs137852672, rs80356637, rs80356642, rs80356653, rs137852673, rs137852674, rs80356634, rs80356651, rs193929360, rs137853334, rs137853335, rs137853336, rs1600731198, rs137853338, rs121964882, rs121964883, rs387906511, rs121964884, rs121964885, rs2147483647, rs387906512, rs121964887, rs121964888, rs121964889, rs121964890, rs121964891, rs28934878, rs74315383, rs121964893, rs886037620, rs886037621, rs80356663, rs121434593, rs121913150, rs587776825, rs137853236, rs2135842335, rs137853237, rs137853238, rs2135818776, rs1566092470, rs1463923467, rs137853243, rs137853244, rs2135839114, rs137853245, rs2135847417, rs121918407, rs104894005, rs104894006, rs80356655, rs104894008, rs104894009, rs104894010, rs104894011, rs80356654, rs104894016, rs193929376, rs193929374, rs193929375, rs193929373, rs80356666, rs80356669, rs80356664, rs193929366, rs1048095, rs193929355, rs193929356, rs1259467443, rs104893642, rs387906777, rs387906779, rs141804752, rs182349376, rs184917682, rs193922396, rs193922400, rs193922401, rs137852676, rs193922407, rs193922638, rs193922257, rs193922258, rs193922259, rs193922260, rs193922261, rs193922262, rs193922263, rs193922264, rs193922265, rs193922268, rs193921338, rs193922269, rs193922272, rs193922273, rs193922275, rs193922278, rs193922279, rs193922280, rs193922281, rs193922282, rs193922283, rs193922284, rs193922286, rs193922287, rs193922289, rs193922291, rs193922295, rs193922297, rs193922300, rs193922302, rs193922303, rs193922308, rs193922313, rs193922314, rs144723656, rs193922315, rs193922316, rs193922317, rs148311934, rs193922319, rs193922320, rs193922326, rs193922329, rs193922330, rs193922331, rs193922335, rs193922336, rs193922338, rs193922340, rs193922341, rs193922471, rs193922475, rs193922476, rs193922479, rs193922355, rs193922356, rs193922576, rs193922578, rs193922582, rs193922588, rs193922592, rs193922594, rs193922596, rs386134267, rs193922598, rs193922599, rs193922600, rs193922604, rs193922605, rs397514580, rs397515519, rs267601516, rs587780343, rs587780345, rs587780346, rs587780347, rs587780357, rs148954387, rs61736969, rs587783673, rs587783672, rs587783669, rs786204676, rs794727236, rs151344624, rs794727775, rs794727839, rs199946797, rs869320673, rs796065047, rs759072800, rs797045595, rs797045209, rs797045207, rs797045213, rs797045623, rs863225280, rs149703259, rs864321656, rs139964066, rs777870079, rs878853246, rs769268803, rs886039380, rs886041392, rs886041391, rs886042610, rs143064649, rs1057516192, rs746480424, rs1057516281, rs576684889, rs754728827, rs1057520291, rs1057520779, rs893256143, rs1057520504, rs1057524790, rs1057524902, rs1057524904, rs1057524905, rs764232985, rs1064793998, rs1064794268, rs769086289, rs369429452, rs1085307913, rs1131691416, rs765432081, rs1131692182, rs748749585, rs1554335441, rs762263694, rs1312678560, rs767565869, rs1375656631, rs1554335391, rs1360415315, rs1554335616, rs1554335752, rs1554909277, rs769518471, rs757171524, rs768951263, rs762703502, rs1555212248, rs1555212359, rs1555813319, rs1555816654, rs1553638903, rs1553638909, rs948820149, rs371977235, rs1553784995, rs76474829, rs200998587, rs1415041911, rs1554334894, rs1260178539, rs1554335421, rs1555211904, rs779184183, rs1554335564, rs200670692, rs1400535021, rs1554334872, rs1555212749, rs1553876668, rs1553878211, rs954727530, rs1554924035, rs372307320, rs925231098, rs1554913069, rs1554933565, rs766431403, rs746714109, rs751279984, rs770664202, rs1008906426, rs758844607, rs1554924540, rs1566092307, rs753998395, rs1565885935, rs1167124132, rs1376796469, rs556436603, rs1562715657, rs1486280029, rs1564869850, rs755259997, rs769569410, rs1172328722, rs1286294151, rs1375557127, rs1568731279, rs1562715426, rs556581174, rs1564865302, rs1565886545, rs776793516, rs1568724014, rs1392795567, rs781260712, rs1562719705, rs1382448285, rs1564977373, rs750586210, rs1598842892, rs1583592247, rs780612692, rs1593060859, rs1476637197, rs751279776, rs1593060890, rs1191912908, rs1167675604, rs1583601110, rs1593058932, rs778611627, rs753296261	26301688
Inflammatory bowel disease	Inflammatory Bowel Diseases, Inflammatory Bowel Disease 10	rs137853579, rs137853580, rs121909601, rs149491038, rs368287711, rs387907326, rs587777338, rs758439420, rs139868987, rs750447828, rs368138379, rs1329427406, rs1264862631, rs1192830343, rs1373354533, rs1419560997, rs1591263883, rs1989014468	26192919, 28067908, 25645662, 18499543, 17435756, 17200669, 18047540, 18985712, 27273576, 17484864, 19659808, 24656308, 24553140
Multiple sclerosis	Multiple Sclerosis	rs104895219, rs483353022, rs483353023, rs483353028, rs483353029, rs483353024, rs483353030, rs3207617, rs483353031, rs483353032, rs483353033, rs483353034, rs483353035, rs483353036, rs483353039, rs483353038, rs61731956, rs568165874, rs767480544	22190364
Psoriasis	Psoriasis	rs281875215, rs587777763, rs281875213, rs281875212	26301688, 26974007

Unknown
Disease name	Disease term	dbSNP ID	References
Ankylosing spondylitis	Ankylosing spondylitis		26974007, 26301688
Autoimmune thyroiditis	Autoimmune thyroiditis		26301688
Celiac disease	Celiac Disease	rs2305764, rs35218876	26301688
Cholangitis	Cholangitis, Sclerosing		26974007
Crohn disease	Crohn Disease, Regional enteritis, NON RARE IN EUROPE: Crohn disease	rs2066847, rs2066844, rs886052047, rs5743265, rs111608429, rs104895438	17435756, 17554300, 18587394, 18438406, 23128233, 21102463, 26974007, 17684544, 22936669, 28067908, 26301688, 26192919, 22412388, 17435756, 18438406
Crohn`s disease of large bowel	Crohn`s disease of large bowel		18438406, 17435756
Crohn`s disease of the ileum	Crohn`s disease of the ileum		17435756, 18438406
Ileocolitis	IIeocolitis		17435756, 18438406
Lupus erythematosus	Lupus Erythematosus, Systemic		26301688
Ulcerative colitis	Ulcerative Colitis		26301688, 26974007