LRP1B (LDL receptor related protein 1B)
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Gene
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Entrez ID
Entrez Gene ID - the GENE ID in NCBI Gene database.
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53353 |
Gene nameGene Name - the full gene name approved by the HGNC.
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LDL receptor related protein 1B |
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
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LRP1B |
SynonymsGene synonyms aliases
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LRP-1B, LRP-DIT, LRPDIT |
ChromosomeChromosome number
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2 |
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
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2q22.1-q22.2 |
SummarySummary of gene provided in NCBI Entrez Gene.
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This gene encodes a member of the low density lipoprotein (LDL) receptor family. These receptors play a wide variety of roles in normal cell function and development due to their interactions with multiple ligands. Disruption of this gene has been reporte |
miRNAmiRNA information provided by mirtarbase database.
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Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
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Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
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Protein
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UniProt ID |
Q9NZR2 |
Protein name |
Low-density lipoprotein receptor-related protein 1B (LRP-1B) (Low-density lipoprotein receptor-related protein-deleted in tumor) (LRP-DIT) |
Protein function |
Potential cell surface proteins that bind and internalize ligands in the process of receptor-mediated endocytosis. |
Family and domains |
Pfam
Accession |
ID |
Position in sequence |
Description |
Type |
PF00057 |
Ldl_recept_a |
30 → 69 |
Low-density lipoprotein receptor domain class A |
Repeat |
PF00057 |
Ldl_recept_a |
75 → 113 |
Low-density lipoprotein receptor domain class A |
Repeat |
PF07645 |
EGF_CA |
155 → 193 |
Calcium-binding EGF domain |
Domain |
PF00058 |
Ldl_recept_b |
295 → 335 |
Low-density lipoprotein receptor repeat class B |
Repeat |
PF00058 |
Ldl_recept_b |
568 → 608 |
Low-density lipoprotein receptor repeat class B |
Repeat |
PF00058 |
Ldl_recept_b |
611 → 654 |
Low-density lipoprotein receptor repeat class B |
Repeat |
PF00058 |
Ldl_recept_b |
657 → 704 |
Low-density lipoprotein receptor repeat class B |
Repeat |
PF14670 |
FXa_inhibition |
798 → 833 |
|
Domain |
PF00057 |
Ldl_recept_a |
843 → 881 |
Low-density lipoprotein receptor domain class A |
Repeat |
PF00057 |
Ldl_recept_a |
884 → 922 |
Low-density lipoprotein receptor domain class A |
Repeat |
PF00057 |
Ldl_recept_a |
925 → 962 |
Low-density lipoprotein receptor domain class A |
Repeat |
PF00057 |
Ldl_recept_a |
965 → 1002 |
Low-density lipoprotein receptor domain class A |
Repeat |
PF00057 |
Ldl_recept_a |
1004 → 1042 |
Low-density lipoprotein receptor domain class A |
Repeat |
PF00057 |
Ldl_recept_a |
1051 → 1088 |
Low-density lipoprotein receptor domain class A |
Repeat |
PF00057 |
Ldl_recept_a |
1093 → 1131 |
Low-density lipoprotein receptor domain class A |
Repeat |
PF14670 |
FXa_inhibition |
1176 → 1212 |
|
Domain |
PF00058 |
Ldl_recept_b |
1347 → 1387 |
Low-density lipoprotein receptor repeat class B |
Repeat |
PF00058 |
Ldl_recept_b |
1390 → 1434 |
Low-density lipoprotein receptor repeat class B |
Repeat |
PF00058 |
Ldl_recept_b |
1618 → 1658 |
Low-density lipoprotein receptor repeat class B |
Repeat |
PF14670 |
FXa_inhibition |
1838 → 1874 |
|
Domain |
PF00058 |
Ldl_recept_b |
1965 → 2005 |
Low-density lipoprotein receptor repeat class B |
Repeat |
PF00058 |
Ldl_recept_b |
2008 → 2049 |
Low-density lipoprotein receptor repeat class B |
Repeat |
PF00058 |
Ldl_recept_b |
2330 → 2372 |
Low-density lipoprotein receptor repeat class B |
Repeat |
PF00057 |
Ldl_recept_a |
2508 → 2547 |
Low-density lipoprotein receptor domain class A |
Repeat |
PF00057 |
Ldl_recept_a |
2550 → 2586 |
Low-density lipoprotein receptor domain class A |
Repeat |
PF00057 |
Ldl_recept_a |
2589 → 2625 |
Low-density lipoprotein receptor domain class A |
Repeat |
PF00057 |
Ldl_recept_a |
2641 → 2674 |
Low-density lipoprotein receptor domain class A |
Repeat |
PF00057 |
Ldl_recept_a |
2680 → 2716 |
Low-density lipoprotein receptor domain class A |
Repeat |
PF00057 |
Ldl_recept_a |
2718 → 2756 |
Low-density lipoprotein receptor domain class A |
Repeat |
PF00057 |
Ldl_recept_a |
2759 → 2799 |
Low-density lipoprotein receptor domain class A |
Repeat |
PF00057 |
Ldl_recept_a |
2803 → 2840 |
Low-density lipoprotein receptor domain class A |
Repeat |
PF00057 |
Ldl_recept_a |
2843 → 2884 |
Low-density lipoprotein receptor domain class A |
Repeat |
PF00057 |
Ldl_recept_a |
2889 → 2925 |
Low-density lipoprotein receptor domain class A |
Repeat |
PF12662 |
cEGF |
2948 → 2971 |
Complement Clr-like EGF-like |
Domain |
PF16472 |
DUF5050 |
3007 → 3241 |
Domain of unknown function (DUF5050) |
Domain |
PF14670 |
FXa_inhibition |
3277 → 3313 |
|
Domain |
PF00057 |
Ldl_recept_a |
3315 → 3352 |
Low-density lipoprotein receptor domain class A |
Repeat |
PF00057 |
Ldl_recept_a |
3355 → 3391 |
Low-density lipoprotein receptor domain class A |
Repeat |
PF00057 |
Ldl_recept_a |
3394 → 3431 |
Low-density lipoprotein receptor domain class A |
Repeat |
PF00057 |
Ldl_recept_a |
3434 → 3471 |
Low-density lipoprotein receptor domain class A |
Repeat |
PF00057 |
Ldl_recept_a |
3474 → 3510 |
Low-density lipoprotein receptor domain class A |
Repeat |
PF00057 |
Ldl_recept_a |
3513 → 3549 |
Low-density lipoprotein receptor domain class A |
Repeat |
PF00057 |
Ldl_recept_a |
3551 → 3587 |
Low-density lipoprotein receptor domain class A |
Repeat |
PF00057 |
Ldl_recept_a |
3592 → 3628 |
Low-density lipoprotein receptor domain class A |
Repeat |
PF00057 |
Ldl_recept_a |
3630 → 3667 |
Low-density lipoprotein receptor domain class A |
Repeat |
PF00057 |
Ldl_recept_a |
3672 → 3710 |
Low-density lipoprotein receptor domain class A |
Repeat |
PF00057 |
Ldl_recept_a |
3760 → 3796 |
Low-density lipoprotein receptor domain class A |
Repeat |
PF07645 |
EGF_CA |
3844 → 3880 |
Calcium-binding EGF domain |
Domain |
PF00058 |
Ldl_recept_b |
4039 → 4080 |
Low-density lipoprotein receptor repeat class B |
Repeat |
PF00008 |
EGF |
4253 → 4283 |
EGF-like domain |
Domain |
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Sequence |
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Sequence length |
4599 |
Interactions |
View interactions |
Associated diseases
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Causal |
Disease name |
Disease term |
dbSNP ID |
References |
Asthma |
Childhood asthma |
rs324981, rs121912630, rs150116809, rs4950928, rs708494, rs1581842283 |
29551627 |
Congenital heart defects |
Congenital Heart Defects |
rs267607101, rs121434422, rs387906498, rs397509416, rs587777371, rs587777372, rs587777374, rs367537998, rs797044882, rs886041730, rs768027510, rs1064793873, rs1555447012, rs1554263268, rs1554263321, rs1555223294, rs782051102, rs1555896779, rs1555896778, rs1555897088, rs374016704, rs1555446983, rs1479104927, rs1562443558, rs755445139, rs1581616817, rs1581655293, rs1899172049 |
28468790 |
Diabetes mellitus |
Diabetes Mellitus, Non-Insulin-Dependent |
rs587776515, rs61730328, rs606231121, rs606231122, rs79020217, rs77625743, rs78378398, rs606231123, rs4402960, rs1362648752, rs3745368, rs3792267, rs3842570, rs5030952, rs2975760, rs119489103, rs7903146, rs12255372, rs11196205, rs104893649, rs80356624, rs80356616, rs80356625, rs80356611, rs104894237, rs80356613, rs137852740, rs137852786, rs387906407, rs151344623, rs28938469, rs28936371, rs137852672, rs80356637, rs80356642, rs80356653, rs137852673, rs137852674, rs80356634, rs80356651, rs193929360, rs137853334, rs137853335, rs137853336, rs1600731198, rs137853338, rs121964882, rs121964883, rs387906511, rs121964884, rs121964885, rs2147483647, rs387906512, rs121964887, rs121964888, rs121964889, rs121964890, rs121964891, rs28934878, rs74315383, rs121964893, rs886037620, rs886037621, rs80356663, rs121434593, rs121913150, rs587776825, rs137853236, rs2135842335, rs137853237, rs137853238, rs2135818776, rs1566092470, rs1463923467, rs137853243, rs137853244, rs2135839114, rs137853245, rs2135847417, rs121918407, rs104894005, rs104894006, rs80356655, rs104894008, rs104894009, rs104894010, rs104894011, rs80356654, rs104894016, rs193929376, rs193929374, rs193929375, rs193929373, rs80356666, rs80356669, rs80356664, rs193929366, rs1048095, rs193929355, rs193929356, rs1259467443, rs104893642, rs387906777, rs387906779, rs141804752, rs182349376, rs184917682, rs193922396, rs193922400, rs193922401, rs137852676, rs193922407, rs193922638, rs193922257, rs193922258, rs193922259, rs193922260, rs193922261, rs193922262, rs193922263, rs193922264, rs193922265, rs193922268, rs193921338, rs193922269, rs193922272, rs193922273, rs193922275, rs193922278, rs193922279, rs193922280, rs193922281, rs193922282, rs193922283, rs193922284, rs193922286, rs193922287, rs193922289, rs193922291, rs193922295, rs193922297, rs193922300, rs193922302, rs193922303, rs193922308, rs193922313, rs193922314, rs144723656, rs193922315, rs193922316, rs193922317, rs148311934, rs193922319, rs193922320, rs193922326, rs193922329, rs193922330, rs193922331, rs193922335, rs193922336, rs193922338, rs193922340, rs193922341, rs193922471, rs193922475, rs193922476, rs193922479, rs193922355, rs193922356, rs193922576, rs193922578, rs193922582, rs193922588, rs193922592, rs193922594, rs193922596, rs386134267, rs193922598, rs193922599, rs193922600, rs193922604, rs193922605, rs397514580, rs397515519, rs267601516, rs587780343, rs587780345, rs587780346, rs587780347, rs587780357, rs148954387, rs61736969, rs587783673, rs587783672, rs587783669, rs786204676, rs794727236, rs151344624, rs794727775, rs794727839, rs199946797, rs869320673, rs796065047, rs759072800, rs797045595, rs797045209, rs797045207, rs797045213, rs797045623, rs863225280, rs149703259, rs864321656, rs139964066, rs777870079, rs878853246, rs769268803, rs886039380, rs886041392, rs886041391, rs886042610, rs143064649, rs1057516192, rs746480424, rs1057516281, rs576684889, rs754728827, rs1057520291, rs1057520779, rs893256143, rs1057520504, rs1057524790, rs1057524902, rs1057524904, rs1057524905, rs764232985, rs1064793998, rs1064794268, rs769086289, rs369429452, rs1085307913, rs1131691416, rs765432081, rs1131692182, rs748749585, rs1554335441, rs762263694, rs1312678560, rs767565869, rs1375656631, rs1554335391, rs1360415315, rs1554335616, rs1554335752, rs1554909277, rs769518471, rs757171524, rs768951263, rs762703502, rs1555212248, rs1555212359, rs1555813319, rs1555816654, rs1553638903, rs1553638909, rs948820149, rs371977235, rs1553784995, rs76474829, rs200998587, rs1415041911, rs1554334894, rs1260178539, rs1554335421, rs1555211904, rs779184183, rs1554335564, rs200670692, rs1400535021, rs1554334872, rs1555212749, rs1553876668, rs1553878211, rs954727530, rs1554924035, rs372307320, rs925231098, rs1554913069, rs1554933565, rs766431403, rs746714109, rs751279984, rs770664202, rs1008906426, rs758844607, rs1554924540, rs1566092307, rs753998395, rs1565885935, rs1167124132, rs1376796469, rs556436603, rs1562715657, rs1486280029, rs1564869850, rs755259997, rs769569410, rs1172328722, rs1286294151, rs1375557127, rs1568731279, rs1562715426, rs556581174, rs1564865302, rs1565886545, rs776793516, rs1568724014, rs1392795567, rs781260712, rs1562719705, rs1382448285, rs1564977373, rs750586210, rs1598842892, rs1583592247, rs780612692, rs1593060859, rs1476637197, rs751279776, rs1593060890, rs1191912908, rs1167675604, rs1583601110, rs1593058932, rs778611627, rs753296261 |
29221444 |
Melanoma |
melanoma |
rs121913315, rs121913323, rs137853080, rs137853081, rs121909232, rs121913388, rs104894094, rs1563902635, rs104894095, rs104894097, rs104894098, rs104894099, rs104894109, rs137854599, rs11547328, rs104894340, rs398123152, rs587780668, rs587782083, rs587782206, rs587782792, rs180177042, rs121913381, rs730881675, rs730881674, rs730881677, rs730881673, rs1800586, rs768966657, rs587778189, rs786204195, rs121913321, rs45476696, rs864622636, rs864622263, rs869025340, rs876660436, rs876658534, rs876658556, rs878853647, rs878853644, rs878853650, rs886041162, rs121913389, rs1057519852, rs121913384, rs121913387, rs1060501266, rs1060501263, rs1060501262, rs749714198, rs1060501265, rs559848002, rs1064794292, rs1131691187, rs1131691186, rs199907548, rs1554654052, rs1554656411, rs1554656624, rs1554653915, rs1554653956, rs1554656253, rs1554654224, rs754806883, rs1057520039, rs1563889584, rs1563889685, rs1287464120, rs1563888944, rs1563892715, rs1563889847, rs141798398, rs1587332338, rs1587340291, rs11552823, rs561034503, rs138677674, rs1819962958, rs1820531050 |
22197931 |
Papillary renal carcinoma |
Papillary Renal Cell Carcinoma |
rs5030823, rs2137087134, rs121913668, rs121913669, rs121913670, rs121913671, rs121913673, rs121913243, rs786202724 |
22138691 |
Prostate cancer |
Malignant neoplasm of prostate, Prostate carcinoma |
rs121909139, rs121909140, rs121909141, rs121909142, rs121909143, rs606231169, rs606231170, rs137852584, rs137852578, rs137852580, rs137852581, rs137852582 |
29662167, 31095341 |
Renal carcinoma |
Renal Cell Carcinoma, Conventional (Clear Cell) Renal Cell Carcinoma, Sarcomatoid Renal Cell Carcinoma, Collecting Duct Carcinoma of the Kidney |
rs121913668, rs121913670, rs121913243, rs786202724 |
22138691 |
Schizophrenia |
Schizophrenia |
rs74315508, rs74315509, rs13447324, rs1558507406, rs387906932, rs387906933, rs863223354, rs863223355, rs776061422, rs863223349, rs748809996, rs759748655, rs863223353, rs863223350, rs863223356, rs781821239, rs863223348, rs863223346, rs863223347, rs863223351, rs863223352, rs61734270, rs797045205, rs869312829, rs869312830, rs770913157, rs869312832, rs869312831, rs781720548, rs1262969313 |
31374203 |
Uveal melanoma |
Uveal melanoma |
rs1559588632 |
31626034 |
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Unknown |
Disease name |
Disease term |
dbSNP ID |
References |
Chromophobe carcinoma |
Chromophobe Renal Cell Carcinoma |
rs137853247 |
22138691 |
Motion sickness |
Motion Sickness |
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25628336 |
Prostatic neoplasms |
Prostatic Neoplasms |
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29662167 |
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