PLCB4 (phospholipase C beta 4)
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Gene
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Entrez ID
Entrez Gene ID - the GENE ID in NCBI Gene database.
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5332 |
Gene nameGene Name - the full gene name approved by the HGNC.
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Phospholipase C beta 4 |
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
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PLCB4 |
SynonymsGene synonyms aliases
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ARCND2, ARCND2A, ARCND2B, PI-PLC |
ChromosomeChromosome number
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20 |
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
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20p12.3-p12.2 |
SummarySummary of gene provided in NCBI Entrez Gene.
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The protein encoded by this gene catalyzes the formation of inositol 1,4,5-trisphosphate and diacylglycerol from phosphatidylinositol 4,5-bisphosphate. This reaction uses calcium as a cofactor and plays an important role in the intracellular transduction |
SNPsSNP information provided by dbSNP.
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SNP ID |
Visualize variation |
Clinical significance |
Consequence |
rs387907179 |
A>C,G |
Pathogenic |
Coding sequence variant, missense variant |
rs397514480 |
A>G |
Pathogenic |
Coding sequence variant, missense variant |
rs397514481 |
G>A,T |
Likely-pathogenic, pathogenic |
Coding sequence variant, missense variant |
rs397514482 |
C>A,T |
Pathogenic |
Coding sequence variant, missense variant |
rs397514483 |
A>C |
Pathogenic |
Coding sequence variant, missense variant |
rs397514769 |
A>T |
Pathogenic |
Coding sequence variant, missense variant |
rs397514770 |
G>A |
Pathogenic |
Coding sequence variant, missense variant |
rs397514771 |
A>T |
Pathogenic |
Coding sequence variant, missense variant |
rs1057521489 |
G>T |
Likely-pathogenic |
Coding sequence variant, genic upstream transcript variant, missense variant, upstream transcript variant |
rs1555839474 |
A>T |
Likely-pathogenic |
Coding sequence variant, missense variant |
rs1568763104 |
G>A,T |
Likely-pathogenic, pathogenic |
Coding sequence variant, missense variant |
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miRNAmiRNA information provided by mirtarbase database.
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Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
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Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
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Protein
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UniProt ID |
Q15147 |
Protein name |
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 (EC 3.1.4.11) (Phosphoinositide phospholipase C-beta-4) (Phospholipase C-beta-4) (PLC-beta-4) |
Protein function |
Activated phosphatidylinositol-specific phospholipase C enzymes catalyze the production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) involved in G-protein coupled receptor signaling pathways. PLCB |
Family and domains |
Pfam
Accession |
ID |
Position in sequence |
Description |
Type |
PF17787 |
PH_14 |
12 → 140 |
PH domain |
Domain |
PF09279 |
EF-hand_like |
209 → 305 |
Phosphoinositide-specific phospholipase C, efhand-like |
Domain |
PF00388 |
PI-PLC-X |
315 → 464 |
Phosphatidylinositol-specific phospholipase C, X domain |
Family |
PF00387 |
PI-PLC-Y |
565 → 679 |
Phosphatidylinositol-specific phospholipase C, Y domain |
Family |
PF00168 |
C2 |
701 → 803 |
C2 domain |
Domain |
PF06631 |
DUF1154 |
913 → 955 |
Protein of unknown function (DUF1154) |
Family |
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Sequence |
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Sequence length |
1175 |
Interactions |
View interactions |
PathwaysPathway information has different metabolic/signaling pathways associated with genes. Each record is hyperlinked to a complete information page which also includes links to the KEGG/Reactome pathway database.
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Associated diseases
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Causal |
Disease name |
Disease term |
dbSNP ID |
References |
Auriculocondylar syndrome |
Auriculo-condylar syndrome, AURICULOCONDYLAR SYNDROME 2, Auriculocondylar syndrome 1, Auriculocondylar syndrome |
rs387907178, rs397514480, rs387907179, rs397514481, rs397514482, rs397514483, rs397514768, rs397514769, rs397514770, rs397514771, rs587777231, rs587777232, rs1553223897 |
22560091, 23315542, 22560091 |
Developmental delay |
Global developmental delay |
rs28941770, rs199469464, rs281865469, rs143747297, rs398123009, rs587777428, rs786205133, rs606231459, rs797044854, rs797045027, rs864309504, rs878853160, rs886039902, rs886042046, rs886041291, rs886041382, rs1057518991, rs1057518699, rs753254213, rs748294403, rs762552974, rs1135401795, rs1553121073, rs1553122926, rs1364690005, rs1554086554, rs1554210415, rs1554168326, rs1554776342, rs1553873247, rs1567860112, rs779009256, rs1557447255, rs1564568350, rs780011005, rs1597464953, rs1200336864, rs1569513017, rs1587459606, rs1570332505, rs748888652, rs1575155995, rs2087029320, rs1589669105, rs1601769604, rs1184981709, rs749201074 |
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Macrocephaly |
Macrocephaly |
rs786204854, rs764333096, rs1557739557 |
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Melanoma |
melanoma |
rs121913315, rs121913323, rs137853080, rs137853081, rs121909232, rs121913388, rs104894094, rs1563902635, rs104894095, rs104894097, rs104894098, rs104894099, rs104894109, rs137854599, rs11547328, rs104894340, rs398123152, rs587780668, rs587782083, rs587782206, rs587782792, rs180177042, rs121913381, rs730881675, rs730881674, rs730881677, rs730881673, rs1800586, rs768966657, rs587778189, rs786204195, rs121913321, rs45476696, rs864622636, rs864622263, rs869025340, rs876660436, rs876658534, rs876658556, rs878853647, rs878853644, rs878853650, rs886041162, rs121913389, rs1057519852, rs121913384, rs121913387, rs1060501266, rs1060501263, rs1060501262, rs749714198, rs1060501265, rs559848002, rs1064794292, rs1131691187, rs1131691186, rs199907548, rs1554654052, rs1554656411, rs1554656624, rs1554653915, rs1554653956, rs1554656253, rs1554654224, rs754806883, rs1057520039, rs1563889584, rs1563889685, rs1287464120, rs1563888944, rs1563892715, rs1563889847, rs141798398, rs1587332338, rs1587340291, rs11552823, rs561034503, rs138677674, rs1819962958, rs1820531050 |
21499247 |
Multiple congenital anomalies |
Multiple congenital anomalies |
rs1057517732 |
18314001, 27007857, 23315542, 28328130, 22560091, 16114046 |
Schizophrenia |
Schizophrenia |
rs74315508, rs74315509, rs13447324, rs1558507406, rs387906932, rs387906933, rs863223354, rs863223355, rs776061422, rs863223349, rs748809996, rs759748655, rs863223353, rs863223350, rs863223356, rs781821239, rs863223348, rs863223346, rs863223347, rs863223351, rs863223352, rs61734270, rs797045205, rs869312829, rs869312830, rs770913157, rs869312832, rs869312831, rs781720548, rs1262969313 |
29064472 |
Uveal melanoma |
Uveal melanoma |
rs1559588632 |
27089179 |
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Unknown |
Disease name |
Disease term |
dbSNP ID |
References |
Bipolar disorder |
Bipolar Disorder |
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29064472 |
Dysmorphic features |
Dysmorphic features |
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27007857, 23315542, 22560091, 16114046, 28328130, 18314001 |
Glossoptosis |
Glossoptosis |
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Microglossia |
Microglossia |
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Microstomia |
Microstomia |
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Microtia |
Congenital small ears |
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22560091 |
Ocular melanosis |
Ocular melanosis |
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Periauricular skin pits |
Periauricular skin pits |
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Posteriorly rotated ear |
Posteriorly rotated ear |
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Ptosis |
Blepharoptosis, Ptosis |
rs139920573 |
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Schizoaffective disorder |
Schizoaffective Disorder |
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29064472 |
Sleep apnea |
Sleep Apnea, Obstructive |
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Vein of galen aneurysm |
Vein of Galen aneurysm |
rs148223897, rs1554688023 |
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