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PHEX (phosphate regulating endopeptidase X-linked)

Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
5251
Gene nameGene Name - the full gene name approved by the HGNC.
Phosphate regulating endopeptidase X-linked
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
PHEX
SynonymsGene synonyms aliases
HPDR, HPDR1, HYP, HYP1, LXHR, PEX, XLH
ChromosomeChromosome number
X
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
Xp22.11
SummarySummary of gene provided in NCBI Entrez Gene.
The protein encoded by this gene is a transmembrane endopeptidase that belongs to the type II integral membrane zinc-dependent endopeptidase family. The protein is thought to be involved in bone and dentin mineralization and renal phosphate reabsorption.
SNPsSNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs137853268 T>A Pathogenic Coding sequence variant, non coding transcript variant, stop gained, genic upstream transcript variant
rs137853269 G>A,C Pathogenic, likely-pathogenic Missense variant, upstream transcript variant, non coding transcript variant, coding sequence variant, 5 prime UTR variant, genic upstream transcript variant
rs140678356 C>G,T Pathogenic Stop gained, missense variant, non coding transcript variant, coding sequence variant, intron variant, genic upstream transcript variant
rs144911719 C>T Conflicting-interpretations-of-pathogenicity, likely-benign Synonymous variant, non coding transcript variant, coding sequence variant
rs147859619 G>C Conflicting-interpretations-of-pathogenicity, benign-likely-benign Missense variant, genic upstream transcript variant, non coding transcript variant, coding sequence variant
miRNAmiRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT051061 hsa-miR-16-5p CLASH 23622248
MIRT514709 hsa-miR-5580-3p HITS-CLIP 21572407
MIRT514706 hsa-miR-5011-5p HITS-CLIP 21572407
MIRT514704 hsa-miR-190a-3p HITS-CLIP 21572407
MIRT514703 hsa-miR-1277-5p HITS-CLIP 21572407
Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0001501 Process Skeletal system development TAS 9070861
GO:0004222 Function Metalloendopeptidase activity IBA 21873635
GO:0005783 Component Endoplasmic reticulum IEA
GO:0005794 Component Golgi apparatus IEA
GO:0005886 Component Plasma membrane IBA 21873635
Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM
HGNC
e!Ensembl
Protein
UniProt ID P78562
Protein name Phosphate-regulating neutral endopeptidase PHEX (EC 3.4.24.-) (Metalloendopeptidase homolog PEX) (Vitamin D-resistant hypophosphatemic rickets protein) (X-linked hypophosphatemia protein) (HYP)
Protein function Peptidase that cleaves SIBLING (small integrin-binding ligand, N-linked glycoprotein)-derived ASARM peptides, thus regulating their biological activity (PubMed:15664000, PubMed:18162525, PubMed:18597632, PubMed:9593714). Cleaves ASARM peptides b
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF05649 Peptidase_M13_N
76 479
Peptidase family M13
Family
PF01431 Peptidase_M13
538 748
Peptidase family M13
Family
Sequence
Sequence length 749
Interactions View interactions
Associated diseases
Causal
Disease name Disease term dbSNP ID References
Arthritis Degenerative polyarthritis rs1594890601, rs1594882933, rs184370809, rs776489319, rs1594883470
Craniosynostosis Craniosynostosis rs104893895, rs587777006, rs587777007, rs587777008, rs587777010, rs281865153, rs281865154, rs864321680, rs864321681, rs1057517670, rs1085307122, rs1064794325, rs1884302, rs1555750816, rs1599823350
Hypophosphatemic rickets Hypophosphatemic Rickets, X-Linked Dominant, Hypophosphatemic Rickets, Familial Hypophosphatemic Rickets rs104894347, rs28937882, rs587776696, rs587776697, rs587776698, rs121908248, rs587776797, rs121908249, rs193922701, rs193922702, rs886041227, rs886041363, rs886041296, rs886041369, rs866429868, rs1556025994, rs1064793847, rs1556128253, rs1554278331, rs899142959, rs373044722 29460029, 9768646, 31065622, 12727977, 9199930, 3414685, 10439971, 11004247, 11414762, 10737991, 19219621, 24684036, 26051471, 11468271, 9106524, 18775977, 9768674, 9097956, 11414762, 18775977, 3414685
Hypophosphatemic vitamin d refractory rickets, x-linked Hypophosphatemic Rickets, X-Linked Recessive rs2146979490, rs137853268, rs137853269, rs137853270, rs137853271, rs151340626, rs193922454, rs193922455, rs193922456, rs193922457, rs193922458, rs193922459, rs193922460, rs797044808, rs875989883, rs886039583, rs886041361, rs886041364, rs886041368, rs886041372, rs886041227, rs886041223, rs886041695, rs886041363, rs886041225, rs886041631, rs886041446, rs886041362, rs886041839, rs886041367, rs886041374, rs886041529, rs886041359, rs886041224, rs886041369, rs886041226, rs1057517799, rs1057517798, rs866429868, rs770573978, rs1057521800, rs1064793956, rs1064793228, rs1064795106, rs1064796845, rs1131691731, rs1131691841, rs1131691645, rs151306376, rs1556010757, rs1556012055, rs202074612, rs770630990, rs1556012100, rs1556012094, rs1556014263, rs1556014287, rs1556020460, rs1556020474, rs1556020485, rs1556020752, rs1556020798, rs1556020818, rs771208171, rs1556023495, rs1556023503, rs1556023505, rs1556023528, rs1556024541, rs1556025314, rs1556025936, rs1556025968, rs1556026027, rs1556026042, rs1556029499, rs1556029516, rs1556029519, rs1556030465, rs1556030487, rs1556030502, rs1556036014, rs754449807, rs375593493, rs1269067103, rs1556070724, rs1556070890, rs1556071086, rs1556071123, rs1556071138, rs1064796928, rs1556091855, rs1556128043, rs1556128253, rs1556135308, rs1556135467, rs1556135477, rs772130004, rs886041296, rs1556138407, rs1556138590, rs1556138742, rs1556148392, rs1556148532, rs748792378, rs1240767654, rs1556151004, rs1556151071, rs1556151137, rs1556151545, rs1556200989, rs1556201034, rs1556201217, rs1556205815, rs1057517981, rs1556206093, rs1556206335, rs1556206403, rs1556138769, rs1556026033, rs1556020770, rs1400504292, rs1569442206, rs1602240890, rs1602240926, rs1602241023, rs1602244836, rs1602273900, rs1602274883, rs1602274893, rs1602274929, rs1602274950, rs1602288211, rs1602290398, rs1602292528, rs1556025994, rs1602303865, rs1602304005, rs1602307078, rs1602307094, rs1602307107, rs1602324484, rs1602324630, rs1602354302, rs1602363343, rs1602363550, rs1602395717, rs1602402229, rs1602402258, rs1602405079, rs1602405176, rs1602405239, rs1602405375, rs1602411514, rs1602439597, rs1602439611, rs1602439662, rs1602442819, rs1602442871, rs1602273769, rs1602244774, rs1602244810, rs915608304 3414685, 18775977, 11414762
Unknown
Disease name Disease term dbSNP ID References
Dwarfism Dwarfism
Enthesitis Enthesitis
Frontal bossing Frontal bossing
Hypomineralization of enamel of tooth Hypomineralization of enamel of tooth

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