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PDE4B (phosphodiesterase 4B)

Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
5142
Gene nameGene Name - the full gene name approved by the HGNC.
Phosphodiesterase 4B
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
PDE4B
SynonymsGene synonyms aliases
DPDE4, PDEIVB
ChromosomeChromosome number
1
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
1p31.3
SummarySummary of gene provided in NCBI Entrez Gene.
This gene is a member of the type IV, cyclic AMP (cAMP)-specific, cyclic nucleotide phosphodiesterase (PDE) family. The encoded protein regulates the cellular concentrations of cyclic nucleotides and thereby play a role in signal transduction. Altered act
miRNAmiRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT144178 hsa-miR-374a-5p HITS-CLIP 22473208
MIRT726989 hsa-miR-26a-5p HITS-CLIP 22473208
MIRT726988 hsa-miR-26b-5p HITS-CLIP 22473208
MIRT144178 hsa-miR-374a-5p HITS-CLIP 22473208
MIRT1220468 hsa-miR-1207-5p CLIP-seq
Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000930 Component Gamma-tubulin complex IEA
GO:0001780 Process Neutrophil homeostasis ISS
GO:0004114 Function 3',5'-cyclic-nucleotide phosphodiesterase activity IBA 21873635
GO:0004115 Function 3',5'-cyclic-AMP phosphodiesterase activity IBA 21873635
GO:0004115 Function 3',5'-cyclic-AMP phosphodiesterase activity IDA 17404263
Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM
HGNC
e!Ensembl
Protein
UniProt ID Q07343
Protein name 3',5'-cyclic-AMP phosphodiesterase 4B (EC 3.1.4.53) (DPDE4) (PDE32) (cAMP-specific phosphodiesterase 4B)
Protein function Hydrolyzes the second messenger cAMP, which is a key regulator of many important physiological processes (PubMed:15260978). May be involved in mediating central nervous system effects of therapeutic agents ranging from antidepressants to antiast
PDB 1F0J , 1RO6 , 1RO9 , 1ROR , 1TB5 , 1XLX , 1XLZ , 1XM4 , 1XM6 , 1XMU , 1XMY , 1XN0 , 1XOS , 1XOT , 1Y2H , 1Y2J , 2CHM , 2QYL , 3D3P , 3FRG , 3G45 , 3GWT , 3HC8 , 3HDZ , 3HMV , 3KKT , 3LY2 , 3O0J , 3O56 , 3O57 , 3W5E , 3WD9 , 4KP6 , 4MYQ , 4NW7 , 4WZI , 4X0F , 5K6J , 5LAQ , 5OHJ , 6BOJ , 8OEG
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF18100 PDE4_UCR
166 281
Phosphodiesterase 4 upstream conserved regions (UCR)
Domain
PF00233 PDEase_I
405 646
Domain
Sequence
MKKSRSVMTVMADDNVKDYFECSLSKSYSSSSNTLGIDLWRGRRCCSGNLQLPPLSQRQS
ERARTPEGDGISRPTTLPLTTLPSIAITTVSQECFDVENGPSPGRSPLDPQASSSAGLVL
HATFPGHSQRRESFLYRSDSDYDLSPKAMSRNSSLPSEQHGDDLIVTPFAQVLASLRSVR
NNFTILTNLHGTSNKRSPAASQPPVSRVNPQEESYQKLAMETLEELDWCLDQLETIQTYR
SVSEMASNKFKRMLNRELTHLSEMSRSGNQVSEYISNTFLD
KQNDVEIPSPTQKDREKKK
KQQLMTQISGVKKLMHSSSLNNTSISRFGVNTENEDHLAKELEDLNKWGLNIFNVAGYSH
NRPLTCIMYAIFQERDLLKTFRISSDTFITYMMTLEDHYHSDVAYHNSLHAADVAQSTHV
LLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVSNQFLINTNSELALMYNDESVLENHHL
AVGFKLLQEEHCDIFMNLTKKQRQTLRKMVIDMVLATDMSKHMSLLADLKTMVETKKVTS
SGVLLLDNYTDRIQVLRNMVHCADLSNPTKSLELYRQWTDRIMEEFFQQGDKERERGMEI
SPMCDKHTASVEKSQVGFIDYIVHPLWETWADLVQPDAQDILDTLE
DNRNWYQSMIPQSP
SPPLDEQNRDCQGLMEKFQFELTLDEEDSEGPEKEGEGHSYFSSTKTLCVIDPENRDSLG
ETDIDIATEDKSPVDT
Sequence length 736
Interactions View interactions
PathwaysPathway information has different metabolic/signaling pathways associated with genes. Each record is hyperlinked to a complete information page which also includes links to the KEGG/Reactome pathway database.
 
KEGG
 
Reactome
  Purine metabolism
Metabolic pathways
cAMP signaling pathway
Parathyroid hormone synthesis, secretion and action
Morphine addiction
  DARPP-32 events
Associated diseases
Causal
Disease name Disease term dbSNP ID References
Asthma Asthma rs324981, rs121912630, rs150116809, rs4950928, rs708494, rs1581842283 21912604
Autism Autistic Disorder rs121964908, rs121912597, rs2710102, rs7794745, rs142990298, rs62643608, rs181327458, rs797046134, rs869312704, rs1555013332, rs876657679, rs1057518999, rs1057518658, rs771827120, rs1555187899, rs773080572, rs753871454, rs1684130791, rs1684180699, rs1553510219, rs1684182454, rs1559060428, rs1553510677, rs1576352885, rs1574152522, rs1574152672, rs1696658542, rs1751123722, rs1750373491, rs1751075634 18090323
Leukemia Leukemia, Myelocytic, Acute, Acute Myeloid Leukemia (AML-M2) rs121909646, rs121913488, rs587776834, rs752746786, rs869312821, rs767454740, rs1554564297, rs11978267, rs4132601 17330099
Narcolepsy Narcolepsy rs104894574, rs387906655 19629137
Unknown
Disease name Disease term dbSNP ID References
Anxiety disorder Anxiety Disorders 31116379
Arsenic encephalopathy Arsenic Encephalopathy 16835338
Bipolar disorder Bipolar Disorder, Depression, Bipolar 17417055, 18394866, 18785206, 19350560, 18394866
Dermatologic disorders Dermatologic disorders 16835338

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