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CRBN (cereblon)

Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
51185
Gene nameGene Name - the full gene name approved by the HGNC.
Cereblon
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
CRBN
SynonymsGene synonyms aliases
MRT2, MRT2A
ChromosomeChromosome number
3
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
3p26.2
SummarySummary of gene provided in NCBI Entrez Gene.
This gene encodes a protein related to the Lon protease protein family. In rodents and other mammals this gene product is found in the cytoplasm localized with a calcium channel membrane protein, and is thought to play a role in brain development. Mutatio
SNPsSNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs78564552 C>T Conflicting-interpretations-of-pathogenicity, likely-benign Intron variant, missense variant, coding sequence variant, 5 prime UTR variant, non coding transcript variant
rs1575094649 G>C Likely-pathogenic Non coding transcript variant, stop gained, coding sequence variant
miRNAmiRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT049014 hsa-miR-92a-3p CLASH 23622248
MIRT908238 hsa-let-7a CLIP-seq
MIRT908239 hsa-let-7b CLIP-seq
MIRT908240 hsa-let-7c CLIP-seq
MIRT908241 hsa-let-7d CLIP-seq
Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0005515 Function Protein binding IPI 20223979, 25416956, 26131937, 26909574, 31515488, 32296183, 32814053
GO:0005634 Component Nucleus IDA 20223979
GO:0005737 Component Cytoplasm IDA 20223979
GO:0016020 Component Membrane IEA
GO:0016567 Process Protein ubiquitination IBA 21873635
Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM
HGNC
e!Ensembl
Protein
UniProt ID Q96SW2
Protein name Protein cereblon
Protein function Substrate recognition component of a DCX (DDB1-CUL4-X-box) E3 protein ligase complex that mediates the ubiquitination and subsequent proteasomal degradation of target proteins, such as MEIS2, ILF2 or GLUL (PubMed:26990986, PubMed:33009960). Norm
PDB 4M91 , 4TZ4 , 5FQD , 5HXB , 5V3O , 6BN7 , 6BN8 , 6BN9 , 6BNB , 6BOY , 6H0F , 6H0G , 6UML , 6XK9 , 7BQU , 7BQV , 7LPS , 7U8F , 8CVP , 8D7U , 8D7V , 8D7W , 8D7X , 8D7Y , 8D7Z , 8D80 , 8D81 , 8DEY , 8G66 , 8OIZ , 8OJH , 8RQ1 , 8RQ8 , 8RQ9 , 8RQA , 8RQC , 8TNP , 8TNQ , 8TNR , 8TZX , 8U15 , 8U16 , 8U17 , 8UH6 , 9CUO , 9DJT , 9DJX , 9DQD , 9FJX , 9GAO
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF02190 LON_substr_bdg
80 317
ATP-dependent protease La (LON) substrate-binding domain
Family
PF03226 Yippee-Mis18
319 437
Yippee zinc-binding/DNA-binding /Mis18, centromere assembly
Domain
Sequence
Sequence length 442
Interactions View interactions
Associated diseases
Causal
Disease name Disease term dbSNP ID References
Anencephaly Cranioschisis rs773607884 27751757
Attention deficit hyperactivity disorder Attention deficit hyperactivity disorder rs120074176, rs786205019
Autism Autistic behavior rs121964908, rs121912597, rs2710102, rs7794745, rs142990298, rs62643608, rs181327458, rs797046134, rs869312704, rs1555013332, rs876657679, rs1057518999, rs1057518658, rs771827120, rs1555187899, rs773080572, rs753871454, rs1684130791, rs1684180699, rs1553510219, rs1684182454, rs1559060428, rs1553510677, rs1576352885, rs1574152522, rs1574152672, rs1696658542, rs1751123722, rs1750373491, rs1751075634
Developmental delay Global developmental delay rs28941770, rs199469464, rs281865469, rs143747297, rs398123009, rs587777428, rs786205133, rs606231459, rs797044854, rs797045027, rs864309504, rs878853160, rs886039902, rs886042046, rs886041291, rs886041382, rs1057518991, rs1057518699, rs753254213, rs748294403, rs762552974, rs1135401795, rs1553121073, rs1553122926, rs1364690005, rs1554086554, rs1554210415, rs1554168326, rs1554776342, rs1553873247, rs1567860112, rs779009256, rs1557447255, rs1564568350, rs780011005, rs1597464953, rs1200336864, rs1569513017, rs1587459606, rs1570332505, rs748888652, rs1575155995, rs2087029320, rs1589669105, rs1601769604, rs1184981709, rs749201074
Unknown
Disease name Disease term dbSNP ID References
Absence of septum pellucidum Absence of septum pellucidum
Central visual impairment Central visual impairment
Cerebral atrophy Cerebral atrophy
Cortical dysplasia Cortical Dysplasia

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