PCNA (proliferating cell nuclear antigen)
|
Gene
|
Entrez ID
Entrez Gene ID - the GENE ID in NCBI Gene database.
|
5111 |
Gene nameGene Name - the full gene name approved by the HGNC.
|
Proliferating cell nuclear antigen |
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
|
PCNA |
SynonymsGene synonyms aliases
|
ATLD2 |
ChromosomeChromosome number
|
20 |
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
|
20p12.3 |
SummarySummary of gene provided in NCBI Entrez Gene.
|
The protein encoded by this gene is found in the nucleus and is a cofactor of DNA polymerase delta. The encoded protein acts as a homotrimer and helps increase the processivity of leading strand synthesis during DNA replication. In response to DNA damage, |
SNPsSNP information provided by dbSNP.
|
SNP ID |
Visualize variation |
Clinical significance |
Consequence |
rs369958038 |
C>A |
Pathogenic |
Coding sequence variant, missense variant |
|
miRNAmiRNA information provided by mirtarbase database.
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Transcription factors
|
|
Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
|
GO ID |
Ontology |
Definition |
Evidence |
Reference |
GO:0000083 |
Process |
Regulation of transcription involved in G1/S transition of mitotic cell cycle |
TAS |
|
GO:0000122 |
Process |
Negative regulation of transcription by RNA polymerase II |
IEA |
|
GO:0000307 |
Component |
Cyclin-dependent protein kinase holoenzyme complex |
IEA |
|
GO:0000701 |
Function |
Purine-specific mismatch base pair DNA N-glycosylase activity |
IDA |
11005803 |
GO:0000723 |
Process |
Telomere maintenance |
TAS |
|
GO:0000781 |
Component |
Chromosome, telomeric region |
HDA |
19135898 |
GO:0000785 |
Component |
Chromatin |
IDA |
23277426 |
GO:0003682 |
Function |
Chromatin binding |
IDA |
23277426, 24939902 |
GO:0003684 |
Function |
Damaged DNA binding |
IDA |
24939902 |
GO:0005515 |
Function |
Protein binding |
IPI |
8861913, 9305916, 10873631, 11005803, 11022036, 11595739, 14657243, 15225546, 15358233, 15543136, 15550930, 15576034, 15805117, 16000169, 16189514, 16482215, 16510448, 16826239, 17955473, 18316726, 18499658, 18692475, 18719106, 19150984, 19419956, 19505873, 19730436, 20457750, 20605 |
GO:0005634 |
Component |
Nucleus |
IDA |
15494374, 19734146, 24939902 |
GO:0005652 |
Component |
Nuclear lamina |
IEA |
|
GO:0005654 |
Component |
Nucleoplasm |
IDA |
|
GO:0005654 |
Component |
Nucleoplasm |
TAS |
|
GO:0005657 |
Component |
Replication fork |
IDA |
9774970 |
GO:0005813 |
Component |
Centrosome |
IDA |
18331714 |
GO:0006272 |
Process |
Leading strand elongation |
IBA |
21873635 |
GO:0006283 |
Process |
Transcription-coupled nucleotide-excision repair |
TAS |
|
GO:0006287 |
Process |
Base-excision repair, gap-filling |
IEA |
|
GO:0006296 |
Process |
Nucleotide-excision repair, DNA incision, 5'-to lesion |
TAS |
|
GO:0006297 |
Process |
Nucleotide-excision repair, DNA gap filling |
TAS |
|
GO:0006298 |
Process |
Mismatch repair |
IBA |
21873635 |
GO:0006298 |
Process |
Mismatch repair |
IDA |
11005803 |
GO:0006298 |
Process |
Mismatch repair |
TAS |
|
GO:0006977 |
Process |
DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest |
TAS |
|
GO:0007507 |
Process |
Heart development |
IEA |
|
GO:0008022 |
Function |
Protein C-terminus binding |
IMP |
11595739 |
GO:0016032 |
Process |
Viral process |
IEA |
|
GO:0016567 |
Process |
Protein ubiquitination |
TAS |
|
GO:0016604 |
Component |
Nuclear body |
IDA |
|
GO:0019899 |
Function |
Enzyme binding |
IPI |
24115439 |
GO:0019985 |
Process |
Translesion synthesis |
IBA |
21873635 |
GO:0019985 |
Process |
Translesion synthesis |
IDA |
20129063 |
GO:0019985 |
Process |
Translesion synthesis |
TAS |
|
GO:0030331 |
Function |
Estrogen receptor binding |
IEA |
|
GO:0030337 |
Function |
DNA polymerase processivity factor activity |
IBA |
21873635 |
GO:0030855 |
Process |
Epithelial cell differentiation |
IEP |
21492153 |
GO:0030894 |
Component |
Replisome |
TAS |
24115439 |
GO:0030971 |
Function |
Receptor tyrosine kinase binding |
IPI |
17115032 |
GO:0031297 |
Process |
Replication fork processing |
ISS |
24115439 |
GO:0032077 |
Process |
Positive regulation of deoxyribonuclease activity |
IDA |
19443450 |
GO:0032139 |
Function |
Dinucleotide insertion or deletion binding |
IDA |
11005803 |
GO:0032201 |
Process |
Telomere maintenance via semi-conservative replication |
TAS |
|
GO:0032355 |
Process |
Response to estradiol |
IEA |
|
GO:0032405 |
Function |
MutLalpha complex binding |
IDA |
11005803 |
GO:0033683 |
Process |
Nucleotide-excision repair, DNA incision |
TAS |
|
GO:0034644 |
Process |
Cellular response to UV |
IDA |
24939902 |
GO:0035035 |
Function |
Histone acetyltransferase binding |
IPI |
24939902 |
GO:0042276 |
Process |
Error-prone translesion synthesis |
TAS |
|
GO:0042769 |
Process |
DNA damage response, detection of DNA damage |
TAS |
|
GO:0042802 |
Function |
Identical protein binding |
IPI |
15805117, 25416956, 26030842, 31515488, 32296183 |
GO:0043596 |
Component |
Nuclear replication fork |
IDA |
15543136, 21383955 |
GO:0043626 |
Component |
PCNA complex |
IBA |
21873635 |
GO:0043626 |
Component |
PCNA complex |
IDA |
24939902 |
GO:0044849 |
Process |
Estrous cycle |
IEA |
|
GO:0044877 |
Function |
Protein-containing complex binding |
IDA |
11595739 |
GO:0045739 |
Process |
Positive regulation of DNA repair |
IMP |
24939902 |
GO:0045740 |
Process |
Positive regulation of DNA replication |
IMP |
24939902 |
GO:0046686 |
Process |
Response to cadmium ion |
IEA |
|
GO:0070062 |
Component |
Extracellular exosome |
HDA |
20458337 |
GO:0070182 |
Function |
DNA polymerase binding |
IPI |
19995904, 24939902 |
GO:0070301 |
Process |
Cellular response to hydrogen peroxide |
IEA |
|
GO:0070557 |
Component |
PCNA-p21 complex |
IDA |
11595739, 18794347 |
GO:0070987 |
Process |
Error-free translesion synthesis |
TAS |
|
GO:0071466 |
Process |
Cellular response to xenobiotic stimulus |
IEA |
|
GO:0071548 |
Process |
Response to dexamethasone |
IEA |
|
GO:0097421 |
Process |
Liver regeneration |
IEA |
|
GO:1900264 |
Process |
Positive regulation of DNA-directed DNA polymerase activity |
IMP |
11595739 |
GO:1902065 |
Process |
Response to L-glutamate |
IEA |
|
GO:1902990 |
Process |
Mitotic telomere maintenance via semi-conservative replication |
ISS |
24115439 |
|
Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
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|
Protein
|
UniProt ID |
P12004 |
Protein name |
Proliferating cell nuclear antigen (PCNA) (Cyclin) |
Protein function |
Auxiliary protein of DNA polymerase delta and epsilon, is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand (PubMed:35585232). Induces a robust stimulatory |
PDB |
1AXC
,
1U76
,
1U7B
,
1UL1
,
1VYJ
,
1VYM
,
1W60
,
2ZVK
,
2ZVL
,
2ZVM
,
3JA9
,
3P87
,
3TBL
,
3VKX
,
3WGW
,
4D2G
,
4RJF
,
4ZTD
,
5E0T
,
5E0U
,
5E0V
,
5IY4
,
5MAV
,
5MLO
,
5MLW
,
5MOM
,
5YCO
,
5YD8
,
6CBI
,
6EHT
,
6FCM
,
6FCN
,
6GIS
,
6GWS
,
6HVO
,
6K3A
,
6QC0
,
6QCG
,
6S1M
,
6S1N
,
6S1O
,
6TNY
,
6TNZ
,
6VVO
,
7EFA
,
7KQ0
,
7KQ1
,
7M5L
,
7M5M
,
7M5N
,
7NV0
|
Family and domains |
Pfam
Accession |
ID |
Position in sequence |
Description |
Type |
PF00705 |
PCNA_N |
1 → 125 |
Proliferating cell nuclear antigen, N-terminal domain |
Domain |
PF02747 |
PCNA_C |
127 → 254 |
Proliferating cell nuclear antigen, C-terminal domain |
Domain |
|
Sequence |
|
Sequence length |
261 |
Interactions |
View interactions |
PathwaysPathway information has different metabolic/signaling pathways associated with genes. Each record is hyperlinked to a complete information page which also includes links to the KEGG/Reactome pathway database.
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Associated diseases
|
Causal |
Disease name |
Disease term |
dbSNP ID |
References |
Adenocarcinoma |
Adenocarcinoma, Adenocarcinoma, Basal Cell, Adenocarcinoma, Oxyphilic, Adenocarcinoma, Tubular |
rs121913530, rs886039394, rs121913474 |
19028472 |
Ataxia-telangiectasia-like disorder |
ATAXIA-TELANGIECTASIA-LIKE DISORDER, ATAXIA-TELANGIECTASIA-LIKE DISORDER 2 |
rs137852759, rs137852761, rs137852762, rs587781381, rs587781384, rs371077728, rs587781822, rs745677716, rs774277300, rs774440500, rs786203931, rs786202253, rs747832587, rs863224508, rs779269083, rs876660186, rs780001540, rs876659343, rs776912688, rs759130031, rs876659145, rs878854776, rs984874083, rs1215450873, rs1376550081, rs1555015413, rs1555017184, rs1295485913, rs1451215042, rs951805101, rs1591688367, rs371455048, rs1274412848, rs1591681273, rs1565228898, rs1157436927, rs1245161888, rs1169667763, rs1157413766, rs1475506136, rs929767929 |
24911150 |
Carcinoma |
Carcinoma, Cribriform, Carcinoma, Granular Cell |
rs121912654, rs555607708, rs786202962, rs1564055259 |
19028472 |
Colonic neoplasms |
Malignant tumor of colon, Colonic Neoplasms |
rs267607789, rs774277300, rs781222233, rs1060502734, rs1060503333, rs1339238483 |
19723570, 19028472 |
Developmental delay |
Global developmental delay |
rs28941770, rs199469464, rs281865469, rs143747297, rs398123009, rs587777428, rs786205133, rs606231459, rs797044854, rs797045027, rs864309504, rs878853160, rs886039902, rs886042046, rs886041291, rs886041382, rs1057518991, rs1057518699, rs753254213, rs748294403, rs762552974, rs1135401795, rs1553121073, rs1553122926, rs1364690005, rs1554086554, rs1554210415, rs1554168326, rs1554776342, rs1553873247, rs1567860112, rs779009256, rs1557447255, rs1564568350, rs780011005, rs1597464953, rs1200336864, rs1569513017, rs1587459606, rs1570332505, rs748888652, rs1575155995, rs2087029320, rs1589669105, rs1601769604, rs1184981709, rs749201074 |
|
Hepatoblastoma |
Hepatoblastoma |
rs137854578, rs28934573, rs121913412 |
11560253 |
Lung cancer |
Malignant neoplasm of lung |
rs121913530, rs121913529, rs878855122, rs1057519784, rs770315135 |
11884234 |
Psoriasis |
Psoriasis |
rs281875215, rs587777763, rs281875213, rs281875212 |
10384915 |
|
Unknown |
Disease name |
Disease term |
dbSNP ID |
References |
Brain neoplasms |
Brain Neoplasms, Malignant neoplasm of brain, Benign neoplasm of brain, unspecified, Brain Tumor, Primary, Recurrent Brain Neoplasm, Primary malignant neoplasm of brain |
rs1800720, rs587781720 |
20932960 |
Intracranial neoplasm |
Neoplasms, Intracranial |
|
20932960 |
Cerebellar atrophy |
Cerebellar atrophy |
|
|
Conjunctival telangiectasis |
Conjunctival telangiectasis |
|
|
Dwarfism |
Dwarfism |
|
|
Dysarthria |
Dysarthria |
|
|
Dysphagia |
Deglutition Disorders |
|
|
Glomerular hyalinosis |
Hyalinosis, Segmental Glomerular |
|
17121042 |
Glomerulosclerosis |
Focal glomerulosclerosis |
|
17121042 |
Lung neoplasms |
Lung Neoplasms |
|
11884234 |
Neurodegenerative photosensitivity syndrome |
PCNA-related progressive neurodegenerative photosensitivity syndrome |
|
|
Palmoplantar pustules |
Pustulosis of Palms and Soles |
|
10384915 |
|
|
|