PCM1 (pericentriolar material 1)
|
Gene
|
Entrez ID
Entrez Gene ID - the GENE ID in NCBI Gene database.
|
5108 |
Gene nameGene Name - the full gene name approved by the HGNC.
|
Pericentriolar material 1 |
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
|
PCM1 |
SynonymsGene synonyms aliases
|
PTC4, RET/PCM-1 |
ChromosomeChromosome number
|
8 |
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
|
8p22 |
SummarySummary of gene provided in NCBI Entrez Gene.
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The protein encoded by this gene is a component of centriolar satellites, which are electron dense granules scattered around centrosomes. Inhibition studies show that this protein is essential for the correct localization of several centrosomal proteins, |
miRNAmiRNA information provided by mirtarbase database.
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Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
|
GO ID |
Ontology |
Definition |
Evidence |
Reference |
GO:0000086 |
Process |
G2/M transition of mitotic cell cycle |
TAS |
|
GO:0000242 |
Component |
Pericentriolar material |
ISS |
|
GO:0001764 |
Process |
Neuron migration |
IEA |
|
GO:0005515 |
Function |
Protein binding |
IPI |
9361024, 14520415, 15107855, 16189514, 17574030, 18000879, 18762586, 18772192, 19081074, 19447967, 20719959, 22500027, 24089205, 24397932, 24550735, 24816561, 25074808, 25416956, 26297806, 26496610, 26638075, 28235840, 28712572, 29892012, 31515488 |
GO:0005737 |
Component |
Cytoplasm |
ISS |
|
GO:0005813 |
Component |
Centrosome |
IDA |
20719959, 21399614, 22797915, 24421332, 24550735 |
GO:0005813 |
Component |
Centrosome |
IDA |
24648492 |
GO:0005813 |
Component |
Centrosome |
ISS |
|
GO:0005814 |
Component |
Centriole |
IBA |
21873635 |
GO:0005829 |
Component |
Cytosol |
IDA |
|
GO:0005829 |
Component |
Cytosol |
TAS |
|
GO:0007098 |
Process |
Centrosome cycle |
IBA |
21873635 |
GO:0007098 |
Process |
Centrosome cycle |
IMP |
17574030 |
GO:0010389 |
Process |
Regulation of G2/M transition of mitotic cell cycle |
TAS |
|
GO:0016020 |
Component |
Membrane |
HDA |
19946888 |
GO:0022027 |
Process |
Interkinetic nuclear migration |
ISS |
|
GO:0031122 |
Process |
Cytoplasmic microtubule organization |
IMP |
22797915, 24816561 |
GO:0031965 |
Component |
Nuclear membrane |
IDA |
|
GO:0032991 |
Component |
Protein-containing complex |
IDA |
24421332 |
GO:0034451 |
Component |
Centriolar satellite |
IBA |
21873635 |
GO:0034451 |
Component |
Centriolar satellite |
IDA |
15616553, 17574030, 20719959, 24550735 |
GO:0034453 |
Process |
Microtubule anchoring |
ISS |
|
GO:0034454 |
Process |
Microtubule anchoring at centrosome |
IBA |
21873635 |
GO:0035176 |
Process |
Social behavior |
IEA |
|
GO:0035735 |
Process |
Intraciliary transport involved in cilium assembly |
IBA |
21873635 |
GO:0035735 |
Process |
Intraciliary transport involved in cilium assembly |
IMP |
24550735 |
GO:0035869 |
Component |
Ciliary transition zone |
IDA |
24415959 |
GO:0036064 |
Component |
Ciliary basal body |
IBA |
21873635 |
GO:0042802 |
Function |
Identical protein binding |
ISS |
|
GO:0045177 |
Component |
Apical part of cell |
IEA |
|
GO:0050768 |
Process |
Negative regulation of neurogenesis |
ISS |
|
GO:0060271 |
Process |
Cilium assembly |
IMP |
15616553, 17574030 |
GO:0071539 |
Process |
Protein localization to centrosome |
IBA |
21873635 |
GO:0071539 |
Process |
Protein localization to centrosome |
IMP |
24816561 |
GO:0071539 |
Process |
Protein localization to centrosome |
ISS |
|
GO:0090316 |
Process |
Positive regulation of intracellular protein transport |
IMP |
22797915, 24550735 |
GO:0097150 |
Process |
Neuronal stem cell population maintenance |
IEA |
|
GO:0097711 |
Process |
Ciliary basal body-plasma membrane docking |
TAS |
|
GO:0097730 |
Component |
Non-motile cilium |
IDA |
17574030 |
GO:1905515 |
Process |
Non-motile cilium assembly |
IMP |
23789104 |
|
Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
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Protein
|
UniProt ID |
Q15154 |
Protein name |
Pericentriolar material 1 protein (PCM-1) (hPCM-1) |
Protein function |
Required for centrosome assembly and function (PubMed:12403812, PubMed:15659651, PubMed:16943179). Essential for the correct localization of several centrosomal proteins including CEP250, CETN3, PCNT and NEK2 (PubMed:12403812, PubMed:15659651). |
PDB |
6HYL
,
6HYM
,
7Q46
|
Family and domains |
Pfam
Accession |
ID |
Position in sequence |
Description |
Type |
PF15717 |
PCM1_C |
1372 → 1998 |
Pericentriolar material 1 C terminus |
Family |
|
Sequence |
|
Sequence length |
2024 |
Interactions |
View interactions |
PathwaysPathway information has different metabolic/signaling pathways associated with genes. Each record is hyperlinked to a complete information page which also includes links to the KEGG/Reactome pathway database.
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Associated diseases
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Causal |
Disease name |
Disease term |
dbSNP ID |
References |
Chronic obstructive pulmonary disease |
Chronic Obstructive Airway Disease |
rs2227956, rs1008438, rs1043618, rs562047, rs1061581, rs2763979, rs6457452, rs13147758, rs1828591, rs13118928 |
26503814 |
Papillary thyroid carcinoma |
Papillary thyroid carcinoma |
rs751409106 |
10980597 |
Schizophrenia |
Schizophrenia |
rs74315508, rs74315509, rs13447324, rs1558507406, rs387906932, rs387906933, rs863223354, rs863223355, rs776061422, rs863223349, rs748809996, rs759748655, rs863223353, rs863223350, rs863223356, rs781821239, rs863223348, rs863223346, rs863223347, rs863223351, rs863223352, rs61734270, rs797045205, rs869312829, rs869312830, rs770913157, rs869312832, rs869312831, rs781720548, rs1262969313 |
19048012 |
|
Unknown |
Disease name |
Disease term |
dbSNP ID |
References |
Thyroid carcinoma |
Differentiated thyroid carcinoma |
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