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SOST (sclerostin)

Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
50964
Gene nameGene Name - the full gene name approved by the HGNC.
Sclerostin
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
SOST
SynonymsGene synonyms aliases
CDD, DAND6, SOST1, VBCH
ChromosomeChromosome number
17
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
17q21.31
SummarySummary of gene provided in NCBI Entrez Gene.
Sclerostin is a secreted glycoprotein with a C-terminal cysteine knot-like (CTCK) domain and sequence similarity to the DAN (differential screening-selected gene aberrative in neuroblastoma) family of bone morphogenetic protein (BMP) antagonists. Loss-of-
SNPsSNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs104894644 C>T Pathogenic Stop gained, coding sequence variant
rs104894645 G>A,T Pathogenic Stop gained, coding sequence variant, synonymous variant
rs387906320 G>A Pathogenic Stop gained, coding sequence variant
rs387907169 C>A,T Pathogenic Coding sequence variant, missense variant
miRNAmiRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT006748 hsa-miR-218-5p Luciferase reporter assay 21501592
MIRT006748 hsa-miR-218-5p Luciferase reporter assay 21501592
MIRT006748 hsa-miR-218-5p Luciferase reporter assay 21501592
MIRT006748 hsa-miR-218-5p Luciferase reporter assay 23060446
MIRT007117 hsa-miR-204-5p Luciferase reporter assay 23472141
Transcription factors
Transcription factor Regulation Reference
MEF2A Repression 17696759
MEF2C Repression 17696759
MEF2D Repression 17696759
Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0001503 Process Ossification IBA 21873635
GO:0005515 Function Protein binding IPI 15908424, 21471202, 21944579, 28514442, 32296183
GO:0005576 Component Extracellular region TAS
GO:0005615 Component Extracellular space IBA 21873635
GO:0005794 Component Golgi apparatus IEA
Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM
HGNC
e!Ensembl
Protein
UniProt ID Q9BQB4
Protein name Sclerostin
Protein function Negative regulator of bone growth that acts through inhibition of Wnt signaling and bone formation.
PDB 2K8P , 3SOV , 6L6R
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF05463 Sclerostin
1 210
Sclerostin (SOST)
Family
Sequence
Sequence length 213
Interactions View interactions
PathwaysPathway information has different metabolic/signaling pathways associated with genes. Each record is hyperlinked to a complete information page which also includes links to the KEGG/Reactome pathway database.
 
KEGG
 
Reactome
  Wnt signaling pathway
Parathyroid hormone synthesis, secretion and action
  Negative regulation of TCF-dependent signaling by WNT ligand antagonists
Associated diseases
Causal
Disease name Disease term dbSNP ID References
Diaphyseal dysplasia Camurati-Engelmann Syndrome rs104894719, rs104894720, rs104894721, rs111033611, rs104894722, rs1599893542
Hearing loss Conductive hearing loss, Sensorineural Hearing Loss (disorder) rs267607135, rs267606855, rs779841884, rs267606854, rs28942097, rs121908073, rs121908076, rs74315289, rs121908144, rs111033313, rs74315437, rs121908348, rs121908349, rs121908350, rs397515359, rs180177151, rs180177154, rs180177153, rs35689081, rs35887622, rs80338944, rs104894396, rs104894398, rs80338947, rs80338948, rs80338942, rs104894402, rs104894403, rs80338945, rs28931594, rs80338940, rs80338941, rs80356590, rs80338950, rs387906706, rs387906707, rs387906708, rs398122848, rs387907016, rs587776894, rs387907088, rs397515411, rs370965183, rs398122930, rs199897298, rs111033187, rs111033448, rs199606180, rs111033284, rs397516413, rs111033305, rs111033220, rs111033256, rs111033297, rs111033253, rs104894408, rs111033295, rs397516874, rs76434661, rs111033335, rs397517323, rs111033247, rs367928692, rs374793617, rs143939430, rs397515605, rs80338939, rs200656442, rs779748859, rs587781261, rs587781262, rs143343083, rs200147906, rs730880338, rs797044491, rs146281367, rs756484720, rs869025593, rs201306709, rs540895576, rs777777359, rs879255246, rs1554358720, rs142498437, rs377145777, rs1057517519, rs779077039, rs952741388, rs1060499797, rs764139009, rs1060499590, rs1064794012, rs1064797115, rs756790858, rs775633137, rs1554952443, rs1554952193, rs782063761, rs1199012623, rs756147087, rs1555648043, rs1555661490, rs1553196233, rs781546107, rs111033190, rs775428246, rs782539587, rs537227442, rs148695069, rs1554835827, rs953422571, rs1554834186, rs1554834161, rs1554835103, rs1554577339, rs1554577402, rs768471577, rs782279338, rs781951909, rs998045226, rs375759781, rs755804651, rs1557458426, rs767797828, rs538027448, rs1559366084, rs367688416, rs1558480402, rs1558490542, rs1559870857, rs1560690591, rs1561299289, rs1562817224, rs1562817529, rs1562822565, rs1562835391, rs1564113368, rs1564554255, rs773851192, rs1564555240, rs761261855, rs1564805114, rs1565522273, rs1565127413, rs781790246, rs1565430886, rs1565469959, rs746667217, rs1565819402, rs1565855932, rs150529554, rs1567939793, rs201866631, rs754472294, rs1559372512, rs1558464965, rs1558488902, rs775062249, rs1226171550, rs1561590396, rs765574676, rs762876554, rs757327146, rs1564949059, rs1565519673, rs368050948, rs1565541888, rs781989117, rs1565402473, rs750358148, rs1386887007, rs1209665716, rs1567641234, rs1237955948, rs1569042782, rs752672077, rs146689036, rs1560070780, rs149712664, rs1564556995, rs762226905, rs773573968, rs1568528171, rs1198256157, rs377267777, rs370564476, rs1577876794, rs747787770, rs759432278, rs1043716893, rs1581138934, rs2033773650, rs1421964916, rs771766431, rs780917129, rs1895773215, rs1895769400, rs761543680, rs1565920060
Macrocephaly Macrocephaly rs786204854, rs764333096, rs1557739557
Melnick-needles syndrome Melnick-Needles Syndrome rs28935472, rs28935473
Unknown
Disease name Disease term dbSNP ID References
Mallet finger Acquired deformity of finger
Chondrodystrophic myotonia Schwartz-Jampel Syndrome, Type 1
Congenital anomaly of nose Congenital anomaly of nose
Cranial nerve paralysis Cranial nerve palsies

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