NEDD4 (NEDD4 E3 ubiquitin protein ligase)
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Gene
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Entrez ID
Entrez Gene ID - the GENE ID in NCBI Gene database.
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4734 |
Gene nameGene Name - the full gene name approved by the HGNC.
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NEDD4 E3 ubiquitin protein ligase |
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
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NEDD4 |
SynonymsGene synonyms aliases
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NEDD4-1, RPF1 |
ChromosomeChromosome number
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15 |
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
|
15q21.3 |
SummarySummary of gene provided in NCBI Entrez Gene.
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This gene is the founding member of the NEDD4 family of HECT ubiquitin ligases that function in the ubiquitin proteasome system of protein degradation. The encoded protein contains an N-terminal calcium and phospholipid binding C2 domain followed by multi |
miRNAmiRNA information provided by mirtarbase database.
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Transcription factors
|
Transcription factor |
Regulation |
Reference |
SIRT2 |
Repression |
23175188 |
|
Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
|
GO ID |
Ontology |
Definition |
Evidence |
Reference |
GO:0000151 |
Component |
Ubiquitin ligase complex |
ISS |
|
GO:0000209 |
Process |
Protein polyubiquitination |
IBA |
21873635 |
GO:0000785 |
Component |
Chromatin |
IDA |
17996703 |
GO:0005515 |
Function |
Protein binding |
IPI |
9305852, 9990509, 10642508, 11359767, 11598133, 12796489, 15231748, 16118794, 17116753, 17719543, 18305167, 19345329, 20086093, 20159449, 20562859, 20676133, 21765395, 22096579, 23665454, 23686771, 23873930, 24981860, 25588945, 29455656 |
GO:0005737 |
Component |
Cytoplasm |
IBA |
21873635 |
GO:0005737 |
Component |
Cytoplasm |
IDA |
12796489 |
GO:0005794 |
Component |
Golgi apparatus |
IDA |
16118794 |
GO:0005829 |
Component |
Cytosol |
ISS |
|
GO:0005829 |
Component |
Cytosol |
TAS |
9405440 |
GO:0005886 |
Component |
Plasma membrane |
IDA |
16118794 |
GO:0005886 |
Component |
Plasma membrane |
IMP |
15126635 |
GO:0005938 |
Component |
Cell cortex |
IDA |
9990509 |
GO:0006511 |
Process |
Ubiquitin-dependent protein catabolic process |
IDA |
20086093, 26263374 |
GO:0006511 |
Process |
Ubiquitin-dependent protein catabolic process |
IMP |
17218260, 17996703 |
GO:0006622 |
Process |
Protein targeting to lysosome |
IPI |
17116753 |
GO:0007041 |
Process |
Lysosomal transport |
IDA |
18544533 |
GO:0007528 |
Process |
Neuromuscular junction development |
IBA |
21873635 |
GO:0010766 |
Process |
Negative regulation of sodium ion transport |
IDA |
10642508 |
GO:0010768 |
Process |
Negative regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage |
IMP |
17996703 |
GO:0014068 |
Process |
Positive regulation of phosphatidylinositol 3-kinase signaling |
IMP |
17218260 |
GO:0016241 |
Process |
Regulation of macroautophagy |
TAS |
25809873 |
GO:0016327 |
Component |
Apicolateral plasma membrane |
TAS |
9405440 |
GO:0016567 |
Process |
Protein ubiquitination |
IBA |
21873635 |
GO:0016567 |
Process |
Protein ubiquitination |
IDA |
17116753, 17996703, 18305167, 25631046, 26280536 |
GO:0019871 |
Function |
Sodium channel inhibitor activity |
IBA |
21873635 |
GO:0019871 |
Function |
Sodium channel inhibitor activity |
IDA |
10642508 |
GO:0019899 |
Function |
Enzyme binding |
IPI |
26006083 |
GO:0019904 |
Function |
Protein domain specific binding |
IPI |
12907594 |
GO:0030948 |
Process |
Negative regulation of vascular endothelial growth factor receptor signaling pathway |
ISS |
|
GO:0031175 |
Process |
Neuron projection development |
IBA |
21873635 |
GO:0031175 |
Process |
Neuron projection development |
IEP |
9990509 |
GO:0031623 |
Process |
Receptor internalization |
IBA |
21873635 |
GO:0031623 |
Process |
Receptor internalization |
IDA |
18544533 |
GO:0031698 |
Function |
Beta-2 adrenergic receptor binding |
IDA |
18544533 |
GO:0032801 |
Process |
Receptor catabolic process |
IBA |
21873635 |
GO:0032801 |
Process |
Receptor catabolic process |
IDA |
18544533 |
GO:0032991 |
Component |
Protein-containing complex |
IDA |
17116753 |
GO:0034644 |
Process |
Cellular response to UV |
IMP |
17996703 |
GO:0034765 |
Process |
Regulation of ion transmembrane transport |
IDA |
17289006 |
GO:0042391 |
Process |
Regulation of membrane potential |
IDA |
17289006 |
GO:0042921 |
Process |
Glucocorticoid receptor signaling pathway |
IDA |
8649367 |
GO:0043130 |
Function |
Ubiquitin binding |
IDA |
9990509 |
GO:0043161 |
Process |
Proteasome-mediated ubiquitin-dependent protein catabolic process |
IBA |
21873635 |
GO:0043162 |
Process |
Ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway |
IMP |
20086093 |
GO:0043197 |
Component |
Dendritic spine |
IBA |
21873635 |
GO:0044111 |
Process |
Development involved in symbiotic interaction |
IMP |
15126635 |
GO:0045732 |
Process |
Positive regulation of protein catabolic process |
IBA |
21873635 |
GO:0045732 |
Process |
Positive regulation of protein catabolic process |
IDA |
14973438 |
GO:0046755 |
Process |
Viral budding |
IMP |
15126635 |
GO:0046824 |
Process |
Positive regulation of nucleocytoplasmic transport |
IDA |
17218261 |
GO:0048471 |
Component |
Perinuclear region of cytoplasm |
IDA |
9990509 |
GO:0048814 |
Process |
Regulation of dendrite morphogenesis |
IBA |
21873635 |
GO:0048814 |
Process |
Regulation of dendrite morphogenesis |
ISS |
|
GO:0050807 |
Process |
Regulation of synapse organization |
IBA |
21873635 |
GO:0050815 |
Function |
Phosphoserine residue binding |
ISS |
|
GO:0050816 |
Function |
Phosphothreonine residue binding |
ISS |
|
GO:0050847 |
Process |
Progesterone receptor signaling pathway |
IDA |
8649367 |
GO:0051592 |
Process |
Response to calcium ion |
TAS |
9405440 |
GO:0061630 |
Function |
Ubiquitin protein ligase activity |
IBA |
21873635 |
GO:0061630 |
Function |
Ubiquitin protein ligase activity |
IDA |
17116753, 17996703, 20086093, 26006083 |
GO:0070062 |
Component |
Extracellular exosome |
HDA |
23533145 |
GO:0070063 |
Function |
RNA polymerase binding |
IPI |
17996703 |
GO:0070064 |
Function |
Proline-rich region binding |
IMP |
15126635 |
GO:0070064 |
Function |
Proline-rich region binding |
IPI |
11342538 |
GO:0070534 |
Process |
Protein K63-linked ubiquitination |
ISS |
|
GO:1901016 |
Process |
Regulation of potassium ion transmembrane transporter activity |
IDA |
17289006 |
GO:2000650 |
Process |
Negative regulation of sodium ion transmembrane transporter activity |
IBA |
21873635 |
GO:2000650 |
Process |
Negative regulation of sodium ion transmembrane transporter activity |
IDA |
10642508 |
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Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
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Protein
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UniProt ID |
P46934 |
Protein name |
E3 ubiquitin-protein ligase NEDD4 (EC 2.3.2.26) (Cell proliferation-inducing gene 53 protein) (HECT-type E3 ubiquitin transferase NEDD4) (Neural precursor cell expressed developmentally down-regulated protein 4) (NEDD-4) |
Protein function |
E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Specifically ubiquitinates 'Lys-63' in target proteins (PubM |
PDB |
2KPZ
,
2KQ0
,
2M3O
,
2XBB
,
2XBF
,
3B7Y
,
4BBN
,
4BE8
,
4N7F
,
4N7H
,
5AHT
,
5C7J
,
5C91
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Family and domains |
Pfam
Accession |
ID |
Position in sequence |
Description |
Type |
PF00397 |
WW |
612 → 641 |
WW domain |
Domain |
PF00397 |
WW |
769 → 798 |
WW domain |
Domain |
PF00397 |
WW |
842 → 871 |
WW domain |
Domain |
PF00397 |
WW |
894 → 923 |
WW domain |
Domain |
PF00632 |
HECT |
1013 → 1318 |
HECT-domain (ubiquitin-transferase) |
Domain |
|
Sequence |
|
Sequence length |
1319 |
Interactions |
View interactions |
PathwaysPathway information has different metabolic/signaling pathways associated with genes. Each record is hyperlinked to a complete information page which also includes links to the KEGG/Reactome pathway database.
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Associated diseases
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Causal |
Disease name |
Disease term |
dbSNP ID |
References |
Breast cancer |
Malignant neoplasm of breast |
rs587776547, rs1137887, rs137853007, rs587776650, rs80359351, rs80359714, rs121917783, rs104886456, rs121964878, rs80359874, rs80357868, rs80357508, rs387906843, rs80357569, rs80358158, rs80357524, rs80357115, rs80357945, rs80357729, rs80357609, rs80357259, rs80357981, rs80358063, rs80357389, rs80356862, rs80359876, rs80357580, rs80358053, rs80358089, rs80187739, rs397507241, rs80358069, rs80357590, rs80357284, rs80357941, rs80359261, rs80359272, rs80359276, rs276174813, rs80358474, rs80359316, rs1555282969, rs80359388, rs80359499, rs80359505, rs80359520, rs80359526, rs80359533, rs56253082, rs80358824, rs80359554, rs80359636, rs80359651, rs80359659, rs80359011, rs80359012, rs80359013, rs80359718, rs397507410, rs81002812, rs80359730, rs80359152, rs80359159, rs397507419, rs28897759, rs80359211, rs80359775, rs397514577, rs397507584, rs80358435, rs80358456, rs80359340, rs80359343, rs80359365, rs80358579, rs397507670, rs80358593, rs80359406, rs80359444, rs80359454, rs276174853, rs276174854, rs80359483, rs80359537, rs80358815, rs80358843, rs80359558, rs80359560, rs80359594, rs80358893, rs28897743, rs397507900, rs397507906, rs397507918, rs80358971, rs80358981, rs397507941, rs80359030, rs80359035, rs41293511, rs397507396, rs81002806, rs80359112, rs397508006, rs81002893, rs45580035, rs80359760, rs397508051, rs80359772, rs4987049, rs80359777, rs80357770, rs397508867, rs62625303, rs397508874, rs80357506, rs80357287, rs273898674, rs80358042, rs80358083, rs80357058, rs41286296, rs80357960, rs80356945, rs80357223, rs386134270, rs80358116, rs80357856, rs80357424, rs397509050, rs80357485, rs80357966, rs397509067, rs80357310, rs80356866, rs80357260, rs80357437, rs80358023, rs80358086, rs80357133, rs80356993, rs80357997, rs80357239, rs80357227, rs397509243, rs80356969, rs80356959, rs63750617, rs63751319, rs587779315, rs200640585, rs398122546, rs80357543, rs398122687, rs80359328, rs398122779, rs398122783, rs62517194, rs80358029, rs515726060, rs180177103, rs180177111, rs180177133, rs587776527, rs180177135, rs180177136, rs515726117, rs587779813, rs587779909, rs587780024, rs587780100, rs28909982, rs121908698, rs180177100, rs587780210, rs587780240, rs587780639, rs587781269, rs587781353, rs587781471, rs587781658, rs587781697, rs587781730, rs587781894, rs587781948, rs587782005, rs587782011, rs200928781, rs587781558, rs370228071, rs587782245, rs587782401, rs180177110, rs587782504, rs72552322, rs587782531, rs587782620, rs587782680, rs587782774, rs587782818, rs730881411, rs730881389, rs564652222, rs397507768, rs587776419, rs730881868, rs730881940, rs56383036, rs758972589, rs201089102, rs730881348, rs786202608, rs786201886, rs786203318, rs786203775, rs786203714, rs786202033, rs750621215, rs786203884, rs786203650, rs772821016, rs863224521, rs864622223, rs864622655, rs375699023, rs876659572, rs768362387, rs876659535, rs876658957, rs483353072, rs876659435, rs267608041, rs876661113, rs730881369, rs878853535, rs772228129, rs878855122, rs760551339, rs80359596, rs397509222, rs886039630, rs886039683, rs886040828, rs587781799, rs886040374, rs886040649, rs397507967, rs878854957, rs886040043, rs1057517589, rs1060502769, rs866380588, rs863224765, rs1064793243, rs747563556, rs1555074976, rs1064795885, rs753961188, rs1064794708, rs869312772, rs1064793887, rs1131690820, rs1135401928, rs1135401868, rs1135401859, rs1553370324, rs397507630, rs1555283160, rs1555283251, rs1555283262, rs1555283361, rs1555286298, rs1555288462, rs886040950, rs1555289566, rs776323117, rs80357123, rs1555579627, rs1555580697, rs80358054, rs1555593302, rs1328985852, rs763470424, rs1555139694, rs878854697, rs1555461217, rs1555461765, rs774684620, rs766416564, rs1554558613, rs1305740166, rs1555461460, rs1555461407, rs1555461586, rs1555567202, rs1555607022, rs1555069815, rs1442299125, rs1474786480, rs1555084947, rs1555457867, rs141087784, rs1482641121, rs1564830522, rs1565469955, rs1565503137, rs864622613, rs755263466, rs757679199, rs1593903166, rs1597801649, rs1603293306, rs879253880, rs80358754, rs1597062038, rs45494092, rs1603275367, rs887358871, rs1597091518, rs1966967065, rs1064793049, rs2082872908, rs2085078278, rs2072475243 |
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Unknown |
Disease name |
Disease term |
dbSNP ID |
References |
Bipolar disorder |
Bipolar Disorder |
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11840194 |
Dupuytren contracture |
Dupuytren Contracture |
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28886342 |
Myocardial ischemia |
Myocardial Ischemia |
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16214533 |
Stevens-johnson syndrome |
Toxic Epidermal Necrolysis, Stevens-Johnson Syndrome, Drug-Induced Stevens Johnson Syndrome, Mycoplasma-Induced Stevens-Johnson Syndrome, Stevens-Johnson Syndrome Toxic Epidermal Necrolysis Spectrum |
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25811541 |
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