IGF2R (insulin like growth factor 2 receptor)
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Gene
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Entrez ID
Entrez Gene ID - the GENE ID in NCBI Gene database.
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3482 |
Gene nameGene Name - the full gene name approved by the HGNC.
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Insulin like growth factor 2 receptor |
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
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IGF2R |
SynonymsGene synonyms aliases
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CD222, CI-M6PR, CIMPR, M6P-R, M6P/IGF2R, MPR 300, MPR1, MPR300, MPRI |
ChromosomeChromosome number
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6 |
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
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6q25.3 |
SummarySummary of gene provided in NCBI Entrez Gene.
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This gene encodes a receptor for both insulin-like growth factor 2 and mannose 6-phosphate. The binding sites for each ligand are located on different segments of the protein. This receptor has various functions, including in the intracellular trafficking of lysosomal enzymes, the activation of transforming growth factor beta, and the degradation of insulin-like growth factor 2. Mutation or loss of heterozygosity of this gene has been association with risk of hepatocellular carcinoma. The orthologous mouse gene is imprinted and shows exclusive expression from the maternal allele; however, imprinting of the human gene may be polymorphic, as only a minority of individuals showed biased expression from the maternal allele (PMID:8267611). [provided by RefSeq, Nov 2015] |
SNPsSNP information provided by dbSNP.
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SNP ID |
Visualize variation |
Clinical significance |
Consequence |
rs121434587 |
G>T |
Pathogenic |
Missense variant, coding sequence variant |
rs121434588 |
G>A |
Pathogenic |
Missense variant, coding sequence variant |
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miRNAmiRNA information provided by mirtarbase database.
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Transcription factors
|
Transcription factor |
Regulation |
Reference |
USF2 |
Activation |
12857727 |
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Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
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Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
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Protein
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UniProt ID |
P11717 |
Protein name |
Cation-independent mannose-6-phosphate receptor (CI Man-6-P receptor) (CI-MPR) (M6PR) (300 kDa mannose 6-phosphate receptor) (MPR 300) (Insulin-like growth factor 2 receptor) (Insulin-like growth factor II receptor) (IGF-II receptor) (M6P/IGF2 receptor) (M6P/IGF2R) (CD antigen CD222) |
Protein function |
Mediates the transport of phosphorylated lysosomal enzymes from the Golgi complex and the cell surface to lysosomes (PubMed:2963003, PubMed:18817523). Lysosomal enzymes bearing phosphomannosyl residues bind specifically to mannose-6-phosphate receptors in the Golgi apparatus and the resulting receptor-ligand complex is transported to an acidic prelysosomal compartment where the low pH mediates the dissociation of the complex (PubMed:2963003, PubMed:18817523). The receptor is then recycled back to the Golgi for another round of trafficking through its binding to the retromer (PubMed:18817523). This receptor also binds IGF2 (PubMed:18046459). Acts as a positive regulator of T-cell coactivation by binding DPP4 (PubMed:10900005). |
PDB |
1E6F
,
1GP0
,
1GP3
,
1GQB
,
1JPL
,
1JWG
,
1LF8
,
2CNJ
,
2L29
,
2L2A
,
2M68
,
2M6T
,
2V5N
,
2V5O
,
2V5P
,
5IEI
,
6N5X
,
6N5Y
,
6P8I
,
6V02
,
6Z30
,
6Z31
,
6Z32
|
Family and domains |
Pfam
Accession |
ID |
Position in sequence |
Description |
Type |
PF00878 |
CIMR |
123 → 270 |
Cation-independent mannose-6-phosphate receptor repeat |
Family |
PF00878 |
CIMR |
277 → 421 |
Cation-independent mannose-6-phosphate receptor repeat |
Family |
PF00878 |
CIMR |
423 → 573 |
Cation-independent mannose-6-phosphate receptor repeat |
Family |
PF00878 |
CIMR |
575 → 716 |
Cation-independent mannose-6-phosphate receptor repeat |
Family |
PF00878 |
CIMR |
720 → 876 |
Cation-independent mannose-6-phosphate receptor repeat |
Family |
PF00878 |
CIMR |
882 → 1026 |
Cation-independent mannose-6-phosphate receptor repeat |
Family |
PF00878 |
CIMR |
1031 → 1178 |
Cation-independent mannose-6-phosphate receptor repeat |
Family |
PF00878 |
CIMR |
1179 → 1320 |
Cation-independent mannose-6-phosphate receptor repeat |
Family |
PF00878 |
CIMR |
1322 → 1462 |
Cation-independent mannose-6-phosphate receptor repeat |
Family |
PF00878 |
CIMR |
1465 → 1599 |
Cation-independent mannose-6-phosphate receptor repeat |
Family |
PF00878 |
CIMR |
1603 → 1750 |
Cation-independent mannose-6-phosphate receptor repeat |
Family |
PF00878 |
CIMR |
1755 → 1894 |
Cation-independent mannose-6-phosphate receptor repeat |
Family |
PF00040 |
fn2 |
1903 → 1942 |
Fibronectin type II domain |
Domain |
PF00878 |
CIMR |
1946 → 2083 |
Cation-independent mannose-6-phosphate receptor repeat |
Family |
PF00878 |
CIMR |
2085 → 2233 |
Cation-independent mannose-6-phosphate receptor repeat |
Family |
PF00878 |
CIMR |
2237 → 2290 |
Cation-independent mannose-6-phosphate receptor repeat |
Family |
|
Sequence |
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Sequence length |
2491 |
Interactions |
View interactions |
PathwaysPathway information has different metabolic/signaling pathways associated with genes. Each record is hyperlinked to a complete information page which also includes links to the KEGG/Reactome pathway database.
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Associated diseases
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Causal |
Disease name |
Disease term |
dbSNP ID |
References |
Parkinson disease |
Parkinson Disease |
rs116074753, rs118203903, rs118203904, rs115735611, rs33939927, rs35801418, rs34805604, rs35870237, rs34995376, rs74315355, rs28940284, rs74315356, rs74315357, rs28940285, rs730880302, rs750664040, rs-1, rs74315359, rs74315360, rs45539432, rs74315361, rs119451946, rs80356771, rs74500255, rs75822236, rs1141814, rs78973108, rs121908681, rs121908686, rs121908687, rs137853054, rs137853055, rs137853056, rs137853057, rs137853058, rs137853059, rs34424986, rs137853060, rs397518439, rs28938172, rs74315351, rs74315353, rs137853051, rs118192098, rs121917767, rs121918104, rs1589451049, rs104893877, rs104893878, rs283413, rs112176450, rs111290936, rs188286943, rs387906863, rs387906864, rs774631197, rs199935023, rs387906942, rs397514694, rs398122403, rs398122404, rs398122405, rs104886460, rs409652, rs431905511, rs63751392, rs756677845, rs864309527, rs864309650, rs750014782, rs1554391082, rs864622011, rs869312810, rs869312809, rs869312811, rs369100678, rs879253853, rs869320761, rs747506979, rs879255630, rs886039854, rs191486604, rs781442277, rs1060499619, rs751037529, rs55777503, rs768091663, rs34208370, rs1553122929, rs772786691, rs754809877, rs1555907463, rs1557561340, rs781600849, rs141263564, rs1557901552, rs777160388, rs756783990, rs867929413, rs1237637353, rs1005937012, rs755000580, rs747427602, rs1578089802, rs771586218, rs748142049, rs1582953433, rs746646126, rs771529549, rs121918106 |
19276553 |
Coronary artery disease |
Coronary Artery Disease |
rs137852988, rs121918313, rs-1, rs121918529, rs121918531, rs137852340, rs405509, rs1555800701, rs1215189537 |
29212778 |
Kidney disease |
Chronic Kidney Diseases |
rs74315342, rs749740335, rs757649673, rs112417755, rs35138315 |
29545352 |
Prostate cancer |
Malignant neoplasm of prostate |
rs121909139, rs121909140, rs121909141, rs121909142, rs121909143, rs606231169, rs606231170, rs137852584, rs137852578, rs137852580, rs137852581, rs137852582 |
29610475 |
Congenital diaphragmatic hernia |
Congenital diaphragmatic hernia |
rs121908602, rs121908604, rs864309713, rs780263938, rs756636036, rs775394591 |
21433279, 20620343 |
Alzheimer disease |
Familial Alzheimer Disease (FAD), Alzheimer Disease, Late Onset, Alzheimer Disease, Early Onset, Alzheimer`s Disease, Alzheimer`s Disease, Focal Onset |
rs63750215, rs28936379, rs63749851, rs63749884, rs28936380, rs63750048, rs63750579, rs63750264, rs63749964, rs63750671, rs281865161, rs63750066, rs63750399, rs63750734, rs63751039, rs63750973, rs63749810, rs63750643, rs-1, rs193922916, rs63750306, rs63750590, rs63750526, rs63751235, rs661, rs63751037, rs63749885, rs63750231, rs63751229, rs63751272, rs63751223, rs63750391, rs63751163, rs281875357, rs63751141, rs63750082, rs121917807, rs63751399, rs63750265, rs63751144, rs63750886, rs63751068, rs121917808, rs63749891, rs63750083, rs63749824, rs63750577, rs267606983, rs63750218, rs63751287, rs63750900, rs145518263, rs63751475, rs63750450, rs63749805, rs63751278, rs63751106, rs63750004, rs63749806, rs63751024, rs63750248, rs63750779, rs63751139, rs63750219, rs63750298, rs63750687, rs63750851, rs1553268799, rs1561901881, rs1561905293, rs866101707, rs1566638673, rs63750009, rs1566656702, rs1566657804, rs1567885728, rs1568339995, rs1566630791, rs1555358260, rs63750964, rs1594998354, rs63751316 |
15750215 |
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Unknown |
Disease name |
Disease term |
dbSNP ID |
References |
Posterolateral diaphragmatic hernia |
Congenital hernia of foramen of Bochdalek |
|
21433279, 20620343 |
Morgagni diaphragmatic hernia |
Congenital hernia of foramen of Morgagni |
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21433279, 20620343 |
Kidney failure |
Kidney Failure, Chronic |
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29545352 |
Lewy body disease |
Lewy Body Disease |
|
19276553 |
Liver carcinoma |
Liver carcinoma |
|
15057872 |
Lung diseases |
Lung diseases |
|
21433279, 20620343 |
Micronodular cirrhosis |
Micronodular cirrhosis |
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Prostatic neoplasms |
Prostatic Neoplasms |
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29610475 |
Senile dementia |
Presenile dementia, Acute Confusional Senile Dementia |
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15750215 |
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