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ZSCAN22 (zinc finger and SCAN domain containing 22)

Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
342945
Gene nameGene Name - the full gene name approved by the HGNC.
Zinc finger and SCAN domain containing 22
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
ZSCAN22
SynonymsGene synonyms aliases
HKR2, ZNF50
ChromosomeChromosome number
19
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
19q13.43
miRNAmiRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT684897 hsa-miR-6502-3p HITS-CLIP 23313552
MIRT684896 hsa-miR-3675-3p HITS-CLIP 23313552
MIRT684895 hsa-miR-4793-5p HITS-CLIP 23313552
MIRT684894 hsa-miR-221-5p HITS-CLIP 23313552
MIRT684893 hsa-miR-8073 HITS-CLIP 23313552
Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000978 Function RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA 21873635
GO:0000981 Function DNA-binding transcription factor activity, RNA polymerase II-specific IBA 21873635
GO:0003674 Function Molecular_function ND
GO:0005515 Function Protein binding IPI 25416956, 25910212, 26871637, 28514442, 31515488, 32296183, 32814053
GO:0005634 Component Nucleus IEA
Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM
HGNC
e!Ensembl
Protein
UniProt ID P10073
Protein name Zinc finger and SCAN domain-containing protein 22 (Krueppel-related zinc finger protein 2) (Protein HKR2) (Zinc finger protein 50)
Protein function May be involved in transcriptional regulation.
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF02023 SCAN
45 134
SCAN domain
Domain
PF00096 zf-C2H2
268 290
Zinc finger, C2H2 type
Domain
PF00096 zf-C2H2
296 318
Zinc finger, C2H2 type
Domain
PF00096 zf-C2H2
324 346
Zinc finger, C2H2 type
Domain
PF00096 zf-C2H2
352 374
Zinc finger, C2H2 type
Domain
PF00096 zf-C2H2
380 402
Zinc finger, C2H2 type
Domain
PF00096 zf-C2H2
408 430
Zinc finger, C2H2 type
Domain
PF00096 zf-C2H2
436 458
Zinc finger, C2H2 type
Domain
PF00096 zf-C2H2
464 486
Zinc finger, C2H2 type
Domain
Sequence
MAIPKHSLSPVPWEEDSFLQVKVEEEEEASLSQGGESSHDHIAHSEAARLRFRHFRYEEA
SGPHEALAHLRALCCQWLQPEAHSKEQILELLVLEQFLGALPPEIQAWVGAQSPKSGEEA
AVLVEDLTQVLDKR
GWDPGAEPTEASCKQSDLGESEPSNVTETLMGGVSLGPAFVKACEP
EGSSERSGLSGEIWTKSVTQQIHFKKTSGPYKDVPTDQRGRESGASRNSSSAWPNLTSQE
KPPSEDKFDLVDAYGTEPPYTYSGKRSSKCRECRKMFQSASALEAHQKTHSRKTPYACSE
CGKAFSRSTHLAQHQVVH
TGAKPHECKECGKAFSRVTHLTQHQRIHTGEKPYKCGECGKT
FSRSTHLTQHQRVH
TGERPYECDACGKAFSQSTHLTQHQRIHTGEKPYKCDACGRAFSDC
SALIRHLRIH
SGEKPYQCKVCPKAFAQSSSLIEHQRIHTGEKPYKCSDCGKAFSRSSALM
VHLRIH
ITVLQ
Sequence length 491
Interactions View interactions
Associated diseases
Unknown
Disease name Disease term dbSNP ID References
Liver neoplasms Liver neoplasms 19233941
Liver cancer Malignant neoplasm of liver 19233941

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