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SMTNL2 (smoothelin like 2)

Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
342527
Gene nameGene Name - the full gene name approved by the HGNC.
Smoothelin like 2
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
SMTNL2
SynonymsGene synonyms aliases
-
ChromosomeChromosome number
17
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
17p13.2
miRNAmiRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT018381 hsa-miR-335-5p Microarray 18185580
MIRT694036 hsa-miR-6771-3p HITS-CLIP 23313552
MIRT694035 hsa-miR-4293 HITS-CLIP 23313552
MIRT672052 hsa-miR-3714 HITS-CLIP 23824327
MIRT672051 hsa-miR-6808-5p HITS-CLIP 23824327
Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0005523 Function Tropomyosin binding IBA 21873635
GO:0005815 Component Microtubule organizing center IBA 21873635
GO:0008157 Function Protein phosphatase 1 binding IBA 21873635
GO:0030036 Process Actin cytoskeleton organization IBA 21873635
GO:0031430 Component M band IBA 21873635
Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM
HGNC
e!Ensembl
Protein
UniProt ID Q2TAL5
Protein name Smoothelin-like protein 2
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00307 CH
351 459
Calponin homology (CH) domain
Domain
Sequence
MEPAPDAQEARTVREALGRYEAALEGAVRALHEDMRGLQRGVERRVAEAMRLAGPLARTV
ADLQRDNQRLQAQLERLTRQVEALGLASGMSPVPGTPGTPSPPPAPGVPDRAPRLGSARF
ASHATFSLSGRGQSLDHDEASESEMRKTSNSCIMENGHQPGAGPGDGPPEIAQNFSAPDP
PRPRPVSLSLRLPHQPVTAITRVSDRFSGETSAAALSPMSAATLGGLNPSPSEVITPWTP
SPSEKNSSFTWSVPSSGYGAVTASKHSNSPPLVTPPQSPVSPQPPAITQVHRQGERRREL
VRSQTLPRTSEAQARKALFEKWEQETAAGKGKGEARARLKRSQSFGVASASSIKQILLEW
CRSKTLGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNSLSPTQRQKNFELAFTMAE
NLANCERLIEVEDMMVMGRKPDPMCVFTYVQSLYNHLRR
FE
Sequence length 461
Interactions View interactions
Associated diseases
Causal
Disease name Disease term dbSNP ID References
Rheumatoid arthritis Rheumatoid Arthritis rs3766379, rs3792876, rs2071592, rs3087456, rs587776843, rs1566328963, rs2240340, rs1557787212 28118524

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