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APOA1 (apolipoprotein A1)

Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
335
Gene nameGene Name - the full gene name approved by the HGNC.
Apolipoprotein A1
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
APOA1
SynonymsGene synonyms aliases
AMYLD3, HPALP2, apo(a)
ChromosomeChromosome number
11
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
11q23.3
SummarySummary of gene provided in NCBI Entrez Gene.
This gene encodes apolipoprotein A-I, which is the major protein component of high density lipoprotein (HDL) in plasma. The encoded preproprotein is proteolytically processed to generate the mature protein, which promotes cholesterol efflux from tissues t
miRNAmiRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT483217 hsa-miR-3179 PAR-CLIP 20371350
MIRT483216 hsa-miR-3202 PAR-CLIP 20371350
MIRT483214 hsa-miR-4747-5p PAR-CLIP 20371350
MIRT483215 hsa-miR-5196-5p PAR-CLIP 20371350
MIRT483217 hsa-miR-3179 PAR-CLIP 20371350
Transcription factors
Transcription factor Regulation Reference
FOXA2 Unknown 7961760
GATA6 Unknown 14659877
HNF4A Unknown 7961760
SP1 Unknown 10829013
Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0001523 Process Retinoid metabolic process TAS
GO:0001540 Function Amyloid-beta binding IDA 11297421
GO:0001540 Function Amyloid-beta binding IPI 9211985
GO:0001932 Process Regulation of protein phosphorylation IEA
GO:0001935 Process Endothelial cell proliferation IEA
Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM
HGNC
e!Ensembl
Protein
UniProt ID P02647
Protein name Apolipoprotein A-I (Apo-AI) (ApoA-I) (Apolipoprotein A1) [Cleaved into: Proapolipoprotein A-I (ProapoA-I); Truncated apolipoprotein A-I (Apolipoprotein A-I(1-242))]
Protein function Participates in the reverse transport of cholesterol from tissues to the liver for excretion by promoting cholesterol efflux from tissues and by acting as a cofactor for the lecithin cholesterol acyltransferase (LCAT). As part of the SPAP comple
PDB 1AV1 , 1GW3 , 1GW4 , 1ODP , 1ODQ , 1ODR , 2MSC , 2MSD , 2MSE , 2N5E , 3K2S , 3R2P , 4V6M , 6CC9 , 6CCH , 6CCX , 6CLZ , 6CM1 , 6PTS , 6PTW , 6W4E , 6W4F , 7KJR , 7RSC , 7RSE , 8EQS
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01442 Apolipoprotein
69 259
Apolipoprotein A1/A4/E domain
Domain
Sequence
Sequence length 267
Interactions View interactions
PathwaysPathway information has different metabolic/signaling pathways associated with genes. Each record is hyperlinked to a complete information page which also includes links to the KEGG/Reactome pathway database.
 
KEGG
 
Reactome
  PPAR signaling pathway
Fat digestion and absorption
Vitamin digestion and absorption
Cholesterol metabolism
African trypanosomiasis
Lipid and atherosclerosis
  Platelet degranulation
ABC transporters in lipid homeostasis
PPARA activates gene expression
Scavenging of heme from plasma
Scavenging by Class B Receptors
Scavenging by Class A Receptors
Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)
Defective ABCA1 causes Tangier disease
Post-translational protein phosphorylation
Chylomicron assembly
HDL assembly
Chylomicron remodeling
HDL clearance
HDL remodeling
Retinoid metabolism and transport
Amyloid fiber formation
Associated diseases
Causal
Disease name Disease term dbSNP ID References
Adenocarcinoma Adenocarcinoma, Adenocarcinoma, Basal Cell, Adenocarcinoma, Oxyphilic, Adenocarcinoma, Tubular rs121913530, rs886039394, rs121913474 15378696
Amyloidosis Amyloidosis, familial visceral rs63750567, rs63750560, rs387906821, rs387906822, rs387906823, rs1561123748, rs140352180, rs770211260, rs763065333, rs1554300664, rs747723062, rs773435101 8208902, 3142462, 27240838, 1502149, 2123470, 27604308, 31482740, 16925563
Anemia Anemia rs118204044, rs118204045, rs118204046, rs121918330, rs869320719, rs869312029, rs121918332, rs869320724, rs767094129, rs786205058, rs786205059, rs137853119, rs137853120, rs137853121, rs1384933966, rs137853122, rs137853123, rs786205060, rs267607121, rs121908584, rs80338697, rs80338699, rs120074166, rs120074167, rs1050828, rs74575103, rs137852314, rs5030868, rs137852316, rs137852317, rs137852318, rs137852319, rs137852320, rs137852321, rs137852322, rs137852323, rs137852324, rs72554665, rs387906468, rs5030872, rs137852326, rs137852333, rs137852327, rs137852328, rs137852329, rs137852330, rs137852331, rs137852332, rs137852334, rs137852335, rs137852336, rs137852339, rs76645461, rs137852340, rs137852341, rs78478128, rs137852343, rs137852344, rs137852345, rs587776730, rs137852346, rs137852347, rs137852349, rs2070404412, rs2070350038, rs2070350009, rs137852303, rs137852304, rs33946267, rs34378160, rs33933298, rs11549407, rs35724775, rs34598529, rs41469945, rs267607201, rs80338694, rs80338696, rs387907018, rs398123546, rs78365220, rs587777100, rs587777101, rs483352840, rs869312752, rs765487627, rs1557229599, rs1557230040, rs1555524842, rs782090947, rs1358275550, rs1557229736, rs1557230573, rs1556323334, rs1233124208, rs1293528130, rs146864395, rs1595503440, rs1603411214, rs137852325, rs1575247302, rs1603411177, rs1336651679, rs782322505
Behcet syndrome Behcet Syndrome rs886040969, rs886039866, rs746055479, rs752615209, rs774164456, rs751454741 12074830
Unknown
Disease name Disease term dbSNP ID References
Aapoai amyloidosis AApoAI amyloidosis
Amyloid polyneuropathy Amyloid Polyneuropathy, Iowa Type
Apolipoprotein a1 deficiency Apolipoprotein A-I deficiency rs121912722
Childhood obesity Pediatric Obesity 25137265

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