GediPNet logo

FAM177A1 (family with sequence similarity 177 member A1)

Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
283635
Gene nameGene Name - the full gene name approved by the HGNC.
Family with sequence similarity 177 member A1
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
FAM177A1
SynonymsGene synonyms aliases
C14orf24, NEDWMG
ChromosomeChromosome number
14
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
14q13.2
SummarySummary of gene provided in NCBI Entrez Gene.
This gene encodes a member of a conserved protein family. Alternative splicing results in multiple transcript variants. This gene is thought to be associated with susceptibility to juvenile idiopathic arthritis. [provided by RefSeq, Apr 2017]
SNPsSNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs730882244 ->A Likely-pathogenic Coding sequence variant, frameshift variant
miRNAmiRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT020986 hsa-miR-155-5p Reporter assay;Other 20584899
MIRT021622 hsa-miR-142-3p Microarray 17612493
MIRT002702 hsa-miR-124-3p Microarray 18668037
MIRT002702 hsa-miR-124-3p Microarray 15685193
MIRT045179 hsa-miR-186-5p CLASH 23622248
Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM
HGNC
e!Ensembl
Protein
UniProt ID Q8N128
Protein name Protein FAM177A1
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF14774 FAM177
39 154
FAM177 family
Family
Sequence
MDQEPVGGVERGEAVAASGAAAAAAFGESAGQMSNERGFENVELGVIGKKKKVPRRVIHF
VSGETMEEYSTDEDEVDGLEKKDVLPTVDPTKLTWGPYLWFYMLRAATSTLSVCDFLGEK
IASVLGISTPKYQYAIDEYYRMKKEEEEEEEENR
MSEEAEKQYQQNKLQTDSIVQTDQPE
TVISSSFVNVNFEMEGDSEVIMESKQNPVSVPP
Sequence length 213
Interactions View interactions
Associated diseases
Causal
Disease name Disease term dbSNP ID References
Dermatitis Dermatitis, Atopic rs61816761, rs150597413, rs138726443, rs201356558, rs149484917, rs372754256, rs747301529, rs567795279, rs745915174 26482879
Psoriasis Psoriasis rs281875215, rs587777763, rs281875213, rs281875212 26974007
Schizophrenia Schizophrenia rs74315508, rs74315509, rs13447324, rs1558507406, rs387906932, rs387906933, rs863223354, rs863223355, rs776061422, rs863223349, rs748809996, rs759748655, rs863223353, rs863223350, rs863223356, rs781821239, rs863223348, rs863223346, rs863223347, rs863223351, rs863223352, rs61734270, rs797045205, rs869312829, rs869312830, rs770913157, rs869312832, rs869312831, rs781720548, rs1262969313 29121268
Unknown
Disease name Disease term dbSNP ID References
Ankylosing spondylitis Ankylosing spondylitis 26974007
Bipolar disorder Bipolar Disorder 29121268
Cholangitis Cholangitis, Sclerosing 26974007
Crohn disease Crohn Disease rs2066847, rs2066844, rs886052047, rs5743265, rs111608429, rs104895438 26974007

| © 2021, Biomedical Informatics Centre, NIRRH |
ICMR-National Institute for Research in Reproductive Health, Jehangir Merwanji Street, Parel, Mumbai-400012
Tel: +91-22-24192104, Fax No: +91-22-24139412