GDF2 (growth differentiation factor 2)
|
Gene
|
Entrez ID
Entrez Gene ID - the GENE ID in NCBI Gene database.
|
2658 |
Gene nameGene Name - the full gene name approved by the HGNC.
|
Growth differentiation factor 2 |
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
|
GDF2 |
SynonymsGene synonyms aliases
|
BMP-9, BMP9, HHT5 |
ChromosomeChromosome number
|
10 |
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
|
10q11.22 |
SummarySummary of gene provided in NCBI Entrez Gene.
|
This gene encodes a secreted ligand of the TGF-beta (transforming growth factor-beta) superfamily of proteins. Ligands of this family bind various TGF-beta receptors leading to recruitment and activation of SMAD family transcription factors that regulate |
SNPsSNP information provided by dbSNP.
|
SNP ID |
Visualize variation |
Clinical significance |
Consequence |
rs35129734 |
C>A,T |
Pathogenic, likely-benign |
Missense variant, coding sequence variant, synonymous variant |
rs139568056 |
G>A |
Conflicting-interpretations-of-pathogenicity |
Synonymous variant, terminator codon variant |
rs199804679 |
C>G,T |
Pathogenic |
Coding sequence variant, missense variant |
rs200330818 |
G>A,T |
Uncertain-significance, pathogenic |
Coding sequence variant, missense variant |
|
miRNAmiRNA information provided by mirtarbase database.
|
|
Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
|
|
Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
|
|
Protein
|
UniProt ID |
Q9UK05 |
Protein name |
Growth/differentiation factor 2 (GDF-2) (Bone morphogenetic protein 9) (BMP-9) |
Protein function |
Potent circulating inhibitor of angiogenesis. Signals through the type I activin receptor ACVRL1 but not other Alks. Signaling through SMAD1 in endothelial cells requires TGF-beta coreceptor endoglin/ENG. {ECO:0000269|PubMed:18309101, ECO:000026 |
PDB |
1ZKZ
,
4FAO
,
4MPL
,
4YCG
,
4YCI
,
5HZW
,
5I05
,
9DPM
,
9DPN
,
9DPO
,
9DPP
,
9DPQ
,
9DPR
,
9DPS
,
9DPT
,
9DPU
,
9DPV
,
9DPW
,
9DPX
|
Family and domains |
Pfam
Accession |
ID |
Position in sequence |
Description |
Type |
PF00688 |
TGFb_propeptide |
56 → 257 |
TGF-beta propeptide |
Family |
PF00019 |
TGF_beta |
326 → 428 |
Transforming growth factor beta like domain |
Domain |
|
Sequence |
|
Sequence length |
429 |
Interactions |
View interactions |
PathwaysPathway information has different metabolic/signaling pathways associated with genes. Each record is hyperlinked to a complete information page which also includes links to the KEGG/Reactome pathway database.
|
|
Associated diseases
|
Causal |
Disease name |
Disease term |
dbSNP ID |
References |
Anemia |
Iron-Refractory Iron Deficiency Anemia |
rs118204044, rs118204045, rs118204046, rs121918330, rs869320719, rs869312029, rs121918332, rs869320724, rs767094129, rs786205058, rs786205059, rs137853119, rs137853120, rs137853121, rs1384933966, rs137853122, rs137853123, rs786205060, rs267607121, rs121908584, rs80338697, rs80338699, rs120074166, rs120074167, rs1050828, rs74575103, rs137852314, rs5030868, rs137852316, rs137852317, rs137852318, rs137852319, rs137852320, rs137852321, rs137852322, rs137852323, rs137852324, rs72554665, rs387906468, rs5030872, rs137852326, rs137852333, rs137852327, rs137852328, rs137852329, rs137852330, rs137852331, rs137852332, rs137852334, rs137852335, rs137852336, rs137852339, rs76645461, rs137852340, rs137852341, rs78478128, rs137852343, rs137852344, rs137852345, rs587776730, rs137852346, rs137852347, rs137852349, rs2070404412, rs2070350038, rs2070350009, rs137852303, rs137852304, rs33946267, rs34378160, rs33933298, rs11549407, rs35724775, rs34598529, rs41469945, rs267607201, rs80338694, rs80338696, rs387907018, rs398123546, rs78365220, rs587777100, rs587777101, rs483352840, rs869312752, rs765487627, rs1557229599, rs1557230040, rs1555524842, rs782090947, rs1358275550, rs1557229736, rs1557230573, rs1556323334, rs1233124208, rs1293528130, rs146864395, rs1595503440, rs1603411214, rs137852325, rs1575247302, rs1603411177, rs1336651679, rs782322505 |
|
Cholelithiasis |
Cholelithiasis |
rs121918440, rs72552778, rs387906528, rs759202962, rs377160065, rs1051861187, rs757693457, rs752563752 |
|
Hereditary hemorrhagic telangiectasia |
Hereditary hemorrhagic telangiectasia |
rs121918400, rs2131875838, rs1564457752, rs121918402, rs373842615, rs730880096, rs863223539, rs863223538, rs863223541, rs863223543, rs863223542, rs863223536, rs863223540, rs863223537, rs863223534, rs863223532, rs863223414, rs863223413, rs863223406, rs864622666, rs878853657, rs878853659, rs878853658, rs886039505, rs886039506, rs886041325, rs886041326, rs886042916, rs1057517944, rs1057521648, rs1060501421, rs1060501413, rs1060501422, rs1060501419, rs1060501410, rs1060501412, rs1554810257, rs1060501414, rs1060501408, rs1064792934, rs1060501417, rs1060501418, rs1064794218, rs1064793889, rs1064793734, rs1064794219, rs1064794220, rs1085307433, rs1085307409, rs1085307429, rs1131691422, rs1131691444, rs1131691931, rs1131691686, rs1554810051, rs1554810378, rs1554809228, rs1554809268, rs1554809450, rs1554810232, rs1554810490, rs1554813788, rs1554810936, rs1197761705, rs111471193, rs1555152440, rs1555152966, rs1555153354, rs1554809361, rs761353511, rs1554812283, rs1554813783, rs1554809448, rs1554809446, rs1554809455, rs1554809516, rs1554810215, rs1554810928, rs1554810177, rs1554810510, rs1554810921, rs1554812253, rs267606783, rs1554809229, rs763475207, rs1554810041, rs1554810272, rs1554809513, rs1329127701, rs1060501420, rs1554809106, rs1554810405, rs1554809355, rs1452543778, rs1554809348, rs1554809363, rs1554810932, rs1554809331, rs774429348, rs1554810174, rs1564452075, rs1564452685, rs1564453619, rs1564455554, rs1564455604, rs12042, rs369596004, rs1564453019, rs1564455715, rs1564456374, rs773334730, rs1564466414, rs1564452747, rs1564453538, rs1440769928, rs1252348200, rs1564452667, rs1564452759, rs1564455970, rs1434169817, rs1335718486, rs1564462765, rs1588574749, rs997074986, rs1588576923, rs1588577016, rs1588580782, rs1588581338, rs1588581785, rs1588581867, rs1588581880, rs1588581902, rs1588581961, rs1588582695, rs1588582870, rs1588582962, rs1588583488, rs1588583530, rs1588583640, rs1588585880, rs1588585941, rs1588585997, rs1588596879, rs1588604603, rs1592223399, rs1592224087, rs1588580932, rs1588582594, rs1588582860, rs1588596830, rs1830375228, rs1830384447, rs1830384910, rs1830385077, rs1830432509, rs1830432773, rs1830579035, rs1243079862, rs1830599875, rs1830620321, rs1830620889, rs1830345043, rs113930974 |
23972370, 26801773 |
Liver failure |
Liver Failure |
rs118203990, rs118203991, rs118203992, rs387907022, rs201861847, rs796065037, rs759315662, rs368196005, rs796052121, rs369437593, rs367683258, rs766314948, rs368085185, rs770446752, rs753039116, rs776797592, rs1490906786, rs1562849964, rs759960319, rs776597537, rs375350359, rs1573008071, rs1601977105, rs1174791046, rs1019313682 |
|
Migraine |
Migraine Disorders |
rs794727411 |
|
Pulmonary arterial hypertension |
Pulmonary arterial hypertension, Idiopathic pulmonary arterial hypertension |
rs121909288, rs137852741, rs137852742, rs137852743, rs137852744, rs137852745, rs137852746, rs137852748, rs137852749, rs137852750, rs137852751, rs137852753, rs863223423, rs863223426, rs863223424, rs863223408, rs869025366, rs876657748, rs886039506, rs886041324, rs1060502576, rs1060502581, rs1060502584, rs1085307149, rs1085307154, rs1085307157, rs1085307163, rs1085307169, rs1085307177, rs1085307180, rs1085307184, rs1085307188, rs1085307191, rs1085307203, rs1085307222, rs1085307223, rs1085307225, rs1085307229, rs1085307234, rs1085307246, rs1085307261, rs1085307267, rs576091247, rs200948870, rs1085307278, rs1085307282, rs1085307285, rs1085307290, rs1085307301, rs1085307306, rs1085307307, rs1085307308, rs1085307315, rs1085307316, rs1553509997, rs1085307324, rs1085307340, rs1085307349, rs1085307352, rs765887545, rs1085307183, rs1555208696, rs1592224412, rs1574415785, rs1574415799, rs1574462520, rs1085307197, rs1574464060, rs749485755, rs1574464121, rs1574464150, rs1574464160, rs1085307214, rs1574485996, rs1574486497, rs1574486566, rs1574488314, rs1574488346, rs1574488353, rs1574488357, rs1574488412, rs1414031345, rs1574488484, rs1574488490, rs863223419, rs1574489046, rs1574494632, rs1574494655, rs1574500018, rs1574505253, rs1574505321, rs371174955, rs1574506729, rs1574506732, rs1574506781, rs1574506790, rs1574506799, rs1574506914, rs1574506976, rs1574507076, rs1574507124, rs1574507215, rs1574507268, rs1574507272, rs1574507276, rs1574507290, rs1574507331, rs398123042, rs374644720, rs1588573831, rs1592222308, rs1592223392, rs756315327, rs1603248167, rs1397811125, rs1603255267, rs1603255327, rs1603255336, rs1603255339, rs754897911, rs1603256095, rs1085307155, rs1085307156, rs1574464226, rs1085307226, rs1574486038, rs1553508321, rs1574488277, rs1574488501, rs1574493841, rs1574499954 |
|
Pulmonary hypertension |
Familial primary pulmonary hypertension |
rs5030847, rs5030850, rs753751183, rs121912592, rs121912593, rs121912596, rs121918359, rs137852741, rs137852742, rs137852743, rs137852744, rs137852745, rs137852746, rs137852747, rs137852748, rs137852749, rs137852750, rs137852751, rs137852752, rs137852753, rs483352902, rs137852756, rs1559129372, rs587777017, rs879255566, rs397514716, rs398123039, rs398123041, rs398123042, rs398123043, rs199475679, rs587780295, rs863223423, rs863223426, rs863223424, rs863223420, rs863223422, rs758683062, rs869025366, rs869025367, rs876657748, rs878854272, rs886039219, rs886039223, rs886039220, rs886039221, rs886039222, rs886039673, rs886041324, rs369061090, rs200214298, rs758724746, rs1060502576, rs1060502581, rs1060502584, rs1064794258, rs1085307144, rs1085307145, rs1085307146, rs1085307148, rs1085307147, rs1085307149, rs1085307150, rs1085307151, rs1085307152, rs1085307153, rs1085307154, rs370120266, rs1085307155, rs1085307156, rs1085307157, rs1085307158, rs1085307159, rs1085307160, rs1085307161, rs1085307162, rs1085307163, rs1085307164, rs1085307165, rs1085307166, rs1085307169, rs1085307170, rs1085307171, rs1085307172, rs1553503200, rs1085307173, rs1085307174, rs1085307175, rs1085307176, rs1085307177, rs1085307178, rs1085307179, rs1085307180, rs1085307181, rs1085307182, rs1085307184, rs1085307185, rs1085307186, rs1085307187, rs1085307188, rs1085307190, rs1085307191, rs1553503473, rs1085307192, rs368090069, rs1085307193, rs1085307194, rs1085307195, rs1085307196, rs1085307197, rs1085307198, rs1085307199, rs1085307201, rs1085307202, rs1085307203, rs1085307204, rs1085307205, rs1085307208, rs1085307209, rs1085307210, rs1085307211, rs1085307212, rs1085307213, rs1085307214, rs1085307215, rs1085307216, rs1085307217, rs1085307219, rs1085307220, rs1085307221, rs1085307222, rs1085307223, rs1085307224, rs1085307225, rs1085307226, rs1085307227, rs1085307228, rs1085307229, rs1085307230, rs1085307231, rs1085307232, rs1085307233, rs1085307234, rs1085307235, rs1085307236, rs1085307237, rs1085307239, rs1085307240, rs1085307242, rs1085307243, rs1085307245, rs1085307246, rs1085307247, rs1085307248, rs1085307249, rs1085307250, rs1085307251, rs1085307252, rs1085307253, rs1085307254, rs1085307255, rs1085307256, rs1085307257, rs1085307258, rs1085307259, rs1085307260, rs1085307261, rs1085307262, rs1085307263, rs1085307265, rs1085307266, rs1085307267, rs1085307268, rs576091247, rs1085307269, rs1085307270, rs1085307271, rs1085307272, rs200948870, rs1085307273, rs1085307275, rs1085307276, rs1085307277, rs1085307278, rs1085307279, rs1085307281, rs1085307282, rs1085307283, rs1085307284, rs1085307285, rs1085307286, rs1085307287, rs1085307290, rs1085307291, rs1085307292, rs1085307294, rs1085307295, rs1085307296, rs1085307297, rs1085307298, rs1085307301, rs748230358, rs1085307303, rs1085307304, rs1085307306, rs1085307307, rs1085307308, rs1085307311, rs946132834, rs1085307313, rs1085307315, rs1085307316, rs1085307317, rs1085307318, rs1553509997, rs1085307319, rs1085307320, rs1085307321, rs1085307322, rs1085307324, rs1085307325, rs1085307326, rs1085307327, rs1085307328, rs767070218, rs1085307329, rs1085307330, rs1085307331, rs1085307332, rs1085307333, rs1085307334, rs1085307335, rs1085307336, rs1085307337, rs1085307338, rs868369541, rs1085307339, rs1085307340, rs1085307342, rs1085307343, rs1085307344, rs1085307345, rs1085307346, rs1085307347, rs1085307348, rs1085307349, rs1085307350, rs1085307351, rs1085307352, rs1085307353, rs937502048, rs1085307355, rs1085307356, rs1085307357, rs1085307358, rs1085307359, rs1085307360, rs1085307361, rs1085307362, rs780722371, rs1085307363, rs1085307365, rs1085307366, rs759990771, rs765887545, rs777458559, rs1085307369, rs1085307370, rs1085307371, rs1085307372, rs759293027, rs1085307373, rs1085307374, rs1085307375, rs1085307376, rs1085307377, rs1085307378, rs1085307379, rs1085307380, rs1085307381, rs1085307382, rs1085307383, rs1085307384, rs1085307385, rs1085307386, rs1085307387, rs1085307389, rs1085307388, rs1085307390, rs1085307391, rs1085307392, rs1085307393, rs1085307394, rs1085307395, rs1006246556, rs1085307396, rs1085307397, rs1085307398, rs1085307399, rs1085307400, rs769603144, rs1085307401, rs1085307402, rs1085307403, rs1085307438, rs1085307436, rs1085307410, rs1085307411, rs1085307412, rs1085307414, rs1085307417, rs1085307419, rs1085307425, rs1085307426, rs121909288, rs1085307183, rs1085307218, rs1085307238, rs1085307302, rs1085307310, rs772497399, rs1326644714, rs1553509984, rs1553508321, rs1288123680, rs1375304341, rs1553509983, rs770716081, rs1553387422, rs1555883342, rs754897911, rs1553512225, rs1275489342, rs202107577, rs201407486, rs1414143303, rs764384490, rs765484849, rs1318756445, rs1290474919, rs772782772, rs767575696, rs1374322297, rs1559073178, rs1559062859, rs1574505369, rs1574506470, rs1574506949, rs201716417, rs767694281, rs1574548003, rs1603248606, rs1603255224, rs1574464060, rs1574506914, rs1603248167, rs1603255327, rs1603256095, rs1574499954, rs1692288591, rs1687663690, rs1688559190, rs1698355880, rs1264586092 |
26801773 |
Telangiectasia |
Telangiectasia, Hereditary Hemorrhagic, Type 1 |
rs121909284, rs28936399, rs121909285, rs387906392, rs121909286, rs28936401, rs387906393, rs121909287, rs121909288, rs28936687, rs28936688, rs121909289, rs387906394, rs121918400, rs2131886961, rs2131875838, rs1564457752, rs267606783, rs121918401, rs121918402, rs267606632, rs141764916, rs373842615, rs730880096, rs863223538, rs863223542, rs863223536, rs863223540, rs863223415, rs863223409, rs863223414, rs863223410, rs863223416, rs758683062, rs863223412, rs863223413, rs863223406, rs1555154144, rs863223408, rs864622666, rs878853657, rs878853659, rs387906391, rs757645341, rs886039505, rs886039506, rs1057517944, rs1057521648, rs774389618, rs1057521203, rs1060501410, rs1060501414, rs1060501408, rs1060501418, rs1060503246, rs1060503249, rs1060503237, rs779485996, rs1060503236, rs1060503241, rs1060503240, rs1060503245, rs1060503247, rs1060503242, rs1060503248, rs1060503235, rs1060503238, rs1064795636, rs1064794219, rs1064794220, rs1064794217, rs1085307432, rs1085307405, rs1085307409, rs1085307410, rs1085307414, rs1085307415, rs1085307417, rs1085307418, rs1085307419, rs1085307422, rs1085307426, rs1085307428, rs1085307429, rs1131691422, rs1131691444, rs1131691931, rs1131691686, rs962224649, rs1554810378, rs1554809450, rs1554810490, rs1555152899, rs1555153126, rs1555153848, rs1555152710, rs1555152520, rs1555152955, rs1555152966, rs1555153354, rs1554810249, rs1554813783, rs1554809516, rs1554810215, rs1554810510, rs763475207, rs1329127701, rs1554810037, rs1555152548, rs1555152771, rs1555152935, rs1555153830, rs1555152786, rs1555152909, rs1555153131, rs1555153796, rs1555152468, rs1555152774, rs1555152815, rs1166311240, rs1301762186, rs1555153277, rs1555153382, rs1554810066, rs1555152447, rs1555152455, rs1554810506, rs1318446539, rs1554809363, rs1318118188, rs1555153133, rs1555152345, rs1555152454, rs1555153828, rs1555153854, rs1555153077, rs148057374, rs1554810408, rs1564455554, rs1564453019, rs1564455715, rs1564452747, rs1252348200, rs1565594467, rs1565594524, rs1565594969, rs1565595121, rs1565595176, rs1565594536, rs1565594547, rs1565594311, rs1565596508, rs1565593274, rs1565595129, rs111710113, rs1564452060, rs1434169817, rs1335718486, rs1564462765, rs775754117, rs1565593639, rs1565594920, rs1565596498, rs1588581846, rs1588577016, rs1588581902, rs1588582695, rs1588583488, rs1588596879, rs1592221728, rs1592221830, rs1592221930, rs556168617, rs1592223399, rs1592223416, rs1592223468, rs1592223490, rs1592224087, rs1592224385, rs762287966, rs1592224402, rs1592224412, rs765895870, rs1592225036, rs1592225044, rs1060503243, rs1592228303, rs1588580932, rs1588582594, rs1592223028, rs1343053876, rs1588581497, rs1588582666, rs1588582860, rs1060501417, rs1588596830, rs1592221459, rs1592223964, rs959973779, rs1592225112, rs1592222308, rs1830384910, rs1830385077, rs1554809448, rs1940729491, rs1184716348, rs1940782891, rs1940783683, rs1940807179, rs1592224291, rs1940812366, rs1940813954, rs1940830552, rs1940833669, rs1940834530, rs1940836783, rs1940837338, rs1940906429, rs771606504, rs1940908116, rs1940908457, rs1940955941, rs1940785759, rs1940838178, rs1830345043, rs1940812948 |
26801773 |
Telangiectasia, hereditary hemorrhagic |
TELANGIECTASIA, HEREDITARY HEMORRHAGIC, TYPE 5 |
rs199804679, rs200330818, rs1555208696, rs1358534877 |
23972370, 25674101 |
|
Unknown |
Disease name |
Disease term |
dbSNP ID |
References |
Cholecystitis |
Cholecystitis |
|
|
Cirrhosis |
Cirrhosis |
rs119465999, rs144369314, rs8056684, rs112053857, rs75998507 |
|
Congestive heart failure |
Congestive heart failure |
rs2301610, rs3833910, rs12301951, rs201674674, rs186741807, rs150140412, rs786205727, rs757840030, rs552050895, rs759465783, rs201978086, rs572757800, rs1572143354, rs749160569 |
|
Conjunctival telangiectasis |
Conjunctival telangiectasis |
|
|
Esophageal varix |
Esophageal Varices |
|
|
Hemangioma, cavernous |
Hemangioma, Cavernous |
|
|
Hematomas |
Spontaneous hematomas |
|
|
Intestinal polyposis |
Intestinal Polyposis |
|
|
Liver carcinoma |
Liver carcinoma |
|
28284560, 23936038 |
Nephrolithiasis |
Nephrolithiasis |
|
|
Portal hypertension |
Portal Hypertension |
|
|
Retinal telangiectasia |
Retinal telangiectasia |
|
|
Subarachnoid hemorrhage |
Subarachnoid Hemorrhage |
|
|
Transient ischemic attack |
Transient Ischemic Attack |
|
|
Visceral angiomatosis |
Visceral angiomatosis |
|
|
|
|
|