LARS2 (leucyl-tRNA synthetase 2, mitochondrial)
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Gene
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Entrez ID
Entrez Gene ID - the GENE ID in NCBI Gene database.
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23395 |
Gene nameGene Name - the full gene name approved by the HGNC.
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Leucyl-tRNA synthetase 2, mitochondrial |
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
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LARS2 |
SynonymsGene synonyms aliases
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HLASA, LEURS, PRLTS4, mtLeuRS |
ChromosomeChromosome number
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3 |
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
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3p21.31 |
SummarySummary of gene provided in NCBI Entrez Gene.
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This gene encodes a class 1 aminoacyl-tRNA synthetase, mitochondrial leucyl-tRNA synthetase. Each of the twenty aminoacyl-tRNA synthetases catalyzes the aminoacylation of a specific tRNA or tRNA isoaccepting family with the cognate amino acid. [provided b |
SNPsSNP information provided by dbSNP.
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SNP ID |
Visualize variation |
Clinical significance |
Consequence |
rs34965084 |
G>A |
Benign-likely-benign, conflicting-interpretations-of-pathogenicity |
Coding sequence variant, genic downstream transcript variant, 3 prime UTR variant, missense variant |
rs398123036 |
C>T |
Pathogenic |
Missense variant, coding sequence variant |
rs536853368 |
A>C,G,T |
Likely-pathogenic |
Missense variant, coding sequence variant |
rs757204777 |
G>A |
Likely-pathogenic |
Missense variant, coding sequence variant |
rs770440975 |
G>A |
Likely-pathogenic |
Coding sequence variant, missense variant |
rs774649299 |
C>T |
Pathogenic |
Coding sequence variant, missense variant |
rs776171893 |
A>G,T |
Pathogenic |
Coding sequence variant, missense variant |
rs786205560 |
A>C |
Uncertain-significance, likely-pathogenic |
Missense variant, coding sequence variant |
rs864309642 |
C>T |
Pathogenic |
Missense variant, coding sequence variant |
rs864309643 |
G>A |
Pathogenic |
Missense variant, coding sequence variant |
rs879255408 |
C>T |
Likely-pathogenic |
Stop gained, coding sequence variant |
rs1163473923 |
C>T |
Likely-pathogenic |
Stop gained, coding sequence variant |
rs1575240334 |
G>A |
Likely-pathogenic |
Missense variant, coding sequence variant |
rs1575308774 |
C>T |
Likely-pathogenic |
Missense variant, coding sequence variant |
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miRNAmiRNA information provided by mirtarbase database.
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Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
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Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
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Protein
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UniProt ID |
Q15031 |
Protein name |
Leucine--tRNA ligase, mitochondrial (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS) |
Protein function |
Catalyzes the attachment of leucine to its cognate tRNA. |
Family and domains |
Pfam
Accession |
ID |
Position in sequence |
Description |
Type |
PF00133 |
tRNA-synt_1 |
58 → 433 |
tRNA synthetases class I (I, L, M and V) |
Family |
PF00133 |
tRNA-synt_1 |
439 → 606 |
tRNA synthetases class I (I, L, M and V) |
Family |
PF00133 |
tRNA-synt_1 |
631 → 679 |
tRNA synthetases class I (I, L, M and V) |
Family |
PF08264 |
Anticodon_1 |
725 → 868 |
Anticodon-binding domain of tRNA ligase |
Domain |
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Sequence |
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Sequence length |
903 |
Interactions |
View interactions |
PathwaysPathway information has different metabolic/signaling pathways associated with genes. Each record is hyperlinked to a complete information page which also includes links to the KEGG/Reactome pathway database.
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Associated diseases
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Causal |
Disease name |
Disease term |
dbSNP ID |
References |
Hydrops, lactic acidosis, and sideroblastic anemia |
HYDROPS, LACTIC ACIDOSIS, AND SIDEROBLASTIC ANEMIA, Hydrops-lactic acidosis-sideroblastic anemia-multisystemic failure syndrome |
rs199589947, rs786205560, rs879255606, rs1575240334, rs536853368, rs770440975, rs1575289366, rs1575292827, rs1575308774 |
26537577 |
Hypertension |
Hypertensive disease |
rs13306026, rs13333226 |
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Patent ductus arteriosus |
Patent ductus arteriosus |
rs80338911, rs879253870, rs879253871, rs879255278, rs879255279, rs879253872 |
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Perrault syndrome |
PERRAULT SYNDROME 4, Perrault syndrome |
rs397515410, rs398123033, rs398123034, rs398123035, rs199589947, rs398123036, rs398123037, rs587777443, rs786205560, rs786205574, rs775766910, rs864309643, rs376177973, rs201392711, rs1131692170, rs776171893, rs774649299, rs766199971, rs1555719766, rs1559484149, rs1562047621, rs754069818, rs778499309, rs1169927428, rs1038744864, rs536853368, rs770440975, rs1575292827, rs1599193093, rs2091852209 |
23541342, 9408748, 26657938, 27604308 |
Schizophrenia |
Schizophrenia |
rs74315508, rs74315509, rs13447324, rs1558507406, rs387906932, rs387906933, rs863223354, rs863223355, rs776061422, rs863223349, rs748809996, rs759748655, rs863223353, rs863223350, rs863223356, rs781821239, rs863223348, rs863223346, rs863223347, rs863223351, rs863223352, rs61734270, rs797045205, rs869312829, rs869312830, rs770913157, rs869312832, rs869312831, rs781720548, rs1262969313 |
15737668 |
Sideroblastic anemia |
Sideroblastic anemia |
rs763817505 |
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Ventricular septal defect |
Ventricular Septal Defects |
rs104894073, rs387906775 |
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