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FNDC3A (fibronectin type III domain containing 3A)

Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
22862
Gene nameGene Name - the full gene name approved by the HGNC.
Fibronectin type III domain containing 3A
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
FNDC3A
SynonymsGene synonyms aliases
FNDC3, HUGO, bA203I16.1, bA203I16.5
ChromosomeChromosome number
13
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
13q14.2
miRNAmiRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT001631 hsa-let-7b-5p pSILAC 18668040
MIRT023556 hsa-miR-1-3p Microarray 18668037
MIRT023556 hsa-miR-1-3p Proteomics 18668040
MIRT027515 hsa-miR-98-5p Microarray 19088304
MIRT001631 hsa-let-7b-5p Proteomics;Other 18668040
Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000139 Component Golgi membrane IEA
GO:0003723 Function RNA binding HDA 22658674
GO:0005794 Component Golgi apparatus IDA 18218838
GO:0016020 Component Membrane HDA 19946888
GO:0016021 Component Integral component of membrane IEA
Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM
HGNC
e!Ensembl
Protein
UniProt ID Q9Y2H6
Protein name Fibronectin type-III domain-containing protein 3A (Human gene expressed in odontoblasts)
Protein function Mediates spermatid-Sertoli adhesion during spermatogenesis.
PDB 1WK0 , 1X3D , 1X4X , 1X5X , 2CRM , 2CRZ
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00041 fn3
267 359
Fibronectin type III domain
Domain
PF00041 fn3
372 455
Fibronectin type III domain
Domain
PF00041 fn3
468 552
Fibronectin type III domain
Domain
PF00041 fn3
567 650
Fibronectin type III domain
Domain
PF00041 fn3
667 747
Fibronectin type III domain
Domain
PF00041 fn3
760 841
Fibronectin type III domain
Domain
PF00041 fn3
865 940
Fibronectin type III domain
Domain
Sequence
MAEHPPLLDTTQILSSDISLLSAPIVSADGTQQVILVQVNPGEAFTIRREDGQFQCITGP
AQVPMMSPNGSVPPIYVPPGYAPQVIEDNGVRRVVVVPQAPEFHPGSHTVLHRSPHPPLP
GFIPVPTMMPPPPRHMYSPVTGAGDMTTQYMPQYQSSQVYGDVDAHSTHGRSNFRDERSS
KTYERLQKKLKDRQGTQKDKMSSPPSSPQKCPSPINEHNGLIKGQIAGGINTGSAKIKSG
KGKGGTQVDTEIEEKDEETKAFEALLSNIVKPVASDIQARTVVLTWSPPSSLINGETDES
SVPELYGYEVLISSTGKDGKYKSVYVGEETNITLNDLKPAMDYHAKVQAEYNSIKGTPS
E
AEIFTTLSCEPDIPNPPRIANRTKNSLTLQWKAPSDNGSKIQNFVLEWDEGKGNGEFCQC
YMGSQKQFKITKLSPAMGCKFRLSARNDYGTSGFS
EEVLYYTSGCAPSMPASPVLTKAGI
TWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYDGEDLAYTVKNLRRSTKYKFKV
IAYNSEGKSNPS
EVVEFTTCPDKPGIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYV
VEMAEGSNGNKWEMIYSGATREHLCDRLNPGCFYRLRVYCISDGGQSAVS
ESLLVQTPAV
PPGPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVYQGSEVEC
TVSSLLPGKTYSFRLRAANKMGFGPFS
EKCDITTAPGPPDQCKPPQVTCRSATCAQVNWE
VPLSNGTDVTEYRLEWGGVEGSMQICYCGPGLSYEIKGLSPATTYYCRVQALSVVGAGPF
S
EVVACVTPPSVPGIVTCLQEISDDEIENPHYSPSTCLAISWEKPCDHGSEILAYSIDFG
DKQSLTVGKVTSYIINNLQPDTTYRIRIQALNSLGAGPFS
HMIKLKTKPLPPDPPRLECV
AFSHQNLKLKWGEGTPKTLSTDSIQYHLQMEDKNGRFVSLYRGPCHTYKVQRLNESTSYK
FCIQACNEAGEGPLSQEYIFTTPKSVPAALKAPKIEKVNDHICEITWECLQPMKGDPVIY
SLQVMLGKDSEFKQIYKGPDSSFRYSSLQLNCEYRFRVCAIRQCQDSLGHQDLVGPYSTT
VLFISQRTEPPASTNRDTVESTRTRRALSDEQCAAVILVLFAFFSILIAFIIQYFVIK
Sequence length 1198
Interactions View interactions
Associated diseases
Causal
Disease name Disease term dbSNP ID References
Psoriasis Psoriasis rs281875215, rs587777763, rs281875213, rs281875212 26974007
Unknown
Disease name Disease term dbSNP ID References
Ankylosing spondylitis Ankylosing spondylitis 26974007
Cholangitis Cholangitis, Sclerosing 26974007
Crohn disease Crohn Disease rs2066847, rs2066844, rs886052047, rs5743265, rs111608429, rs104895438 26974007
Ulcerative colitis Ulcerative Colitis 26974007

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