GediPNet logo

ZNF652 (zinc finger protein 652)

Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
22834
Gene nameGene Name - the full gene name approved by the HGNC.
Zinc finger protein 652
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
ZNF652
SynonymsGene synonyms aliases
-
ChromosomeChromosome number
17
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
17q21.32-q21.33
miRNAmiRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT000975 hsa-miR-155-5p Luciferase reporter assay 18367535
MIRT000975 hsa-miR-155-5p Reporter assay;Other 20584899
MIRT000975 hsa-miR-155-5p Western blot 22797073
MIRT000975 hsa-miR-155-5p Microarray, qRT-PCR 25128227
MIRT021105 hsa-miR-186-5p Sequencing 20371350
Transcription factors
Transcription factor Regulation Reference
CBFA2T3 Repression 20116376
Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000978 Function RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA 21873635
GO:0000981 Function DNA-binding transcription factor activity, RNA polymerase II-specific IBA 21873635
GO:0005515 Function Protein binding IPI 16966434
GO:0005634 Component Nucleus IBA 21873635
GO:0006357 Process Regulation of transcription by RNA polymerase II IBA 21873635
Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM
HGNC
e!Ensembl
Protein
UniProt ID Q9Y2D9
Protein name Zinc finger protein 652
Protein function Functions as a transcriptional repressor.
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00096 zf-C2H2
245 268
Zinc finger, C2H2 type
Domain
PF12874 zf-met
329 351
Domain
PF00096 zf-C2H2
357 379
Zinc finger, C2H2 type
Domain
PF00096 zf-C2H2
385 407
Zinc finger, C2H2 type
Domain
PF00096 zf-C2H2
441 463
Zinc finger, C2H2 type
Domain
Sequence
MSHTASSCQELVENCAVHVAGMAQEDSRRGQVPSSFYHGANQELDLSTKVYKRESGSPYS
VLVDTKMSKPHLHETEEQPYFRETRAVSDVHAVKEDRENSDDTEEEEEEVSYKREQIIVE
VNLNNQTLNVSKGEKGVSSQSKETPVLKTSSEEEEEESEEEATDDSNDYGENEKQKKKEK
IVEKVSVTQRRTRRAASVAAATTSPTPRTTRGRRKSVEPPKRKKRATKEPKAPVQKAKCE
EKETLTCEKCPRVFNTRWYLEKHMNVTHRRMQICDKCGKKFVLESELSLHQQTDCEKNIQ
CVSCNKSFKKLWSLHEHIKIVHGYAEKKFSCEICEKKFYTMAHVRKHMVAHTKDMPFTCE
TCGKSFKRSMSLKVHSLQH
SGEKPFRCENCDERFQYKYQLRSHMSIHIGHKQFMCQWCGK
DFNMKQYFDEHMKTHTGEKPFICEICGKSFTSRPNMKRHRRTHTGEKPYPCDVCGQRFRF
SNMLKAHKEKCFRVTSPVNVPPAVQIPLTTSPATPVPSVVNTATTPTPPINMNPVSTLPP
RPIPHPFSHLHIHPHPHHPHHLPIPPVPHLPPPPALFKSEPLNHRGQSEDNFLRHLAEKN
SSAQHH
Sequence length 606
Interactions View interactions
Associated diseases
Causal
Disease name Disease term dbSNP ID References
Asthma Asthma rs324981, rs121912630, rs150116809, rs4950928, rs708494, rs1581842283 30552067
Coronary artery disease Coronary Artery Disease rs137852988, rs121918313, rs-1, rs121918529, rs121918531, rs137852340, rs405509, rs1555800701, rs1215189537 29212778
Prostate cancer Malignant neoplasm of prostate, Prostate carcinoma rs121909139, rs121909140, rs121909141, rs121909142, rs121909143, rs606231169, rs606231170, rs137852584, rs137852578, rs137852580, rs137852581, rs137852582 21602798
Unknown
Disease name Disease term dbSNP ID References
Eczema Eczema 30595370
Malignant neoplasm Malignant Neoplasms 29299148
Respiratory tract diseases Respiratory Tract Diseases 30595370

| © 2021, Biomedical Informatics Centre, NIRRH |
ICMR-National Institute for Research in Reproductive Health, Jehangir Merwanji Street, Parel, Mumbai-400012
Tel: +91-22-24192104, Fax No: +91-22-24139412