EWSR1 (EWS RNA binding protein 1)
|
Gene
|
Entrez ID
Entrez Gene ID - the GENE ID in NCBI Gene database.
|
2130 |
Gene nameGene Name - the full gene name approved by the HGNC.
|
EWS RNA binding protein 1 |
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
|
EWSR1 |
SynonymsGene synonyms aliases
|
EWS, EWS-FLI1 |
ChromosomeChromosome number
|
22 |
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
|
22q12.2 |
SummarySummary of gene provided in NCBI Entrez Gene.
|
This gene encodes a multifunctional protein that is involved in various cellular processes, including gene expression, cell signaling, and RNA processing and transport. The protein includes an N-terminal transcriptional activation domain and a C-terminal |
miRNAmiRNA information provided by mirtarbase database.
|
miRTarBase ID |
miRNA |
Experiments |
Reference |
MIRT006152 |
hsa-let-7a-5p |
Luciferase reporter assay, Microarray, qRT-PCR, Western blot |
21853155 |
MIRT006152 |
hsa-let-7a-5p |
Luciferase reporter assay, Microarray, qRT-PCR, Western blot |
21853155 |
MIRT006152 |
hsa-let-7a-5p |
Luciferase reporter assay, Microarray, qRT-PCR, Western blot |
21853155 |
MIRT006152 |
hsa-let-7a-5p |
Luciferase reporter assay, Microarray, qRT-PCR, Western blot |
21853155 |
MIRT006152 |
hsa-let-7a-5p |
Luciferase reporter assay, Microarray, qRT-PCR, Western blot |
21853155 |
MIRT006152 |
hsa-let-7a-5p |
Luciferase reporter assay, Microarray, qRT-PCR, Western blot |
21853155 |
MIRT051778 |
hsa-let-7c-5p |
CLASH |
23622248 |
MIRT048593 |
hsa-miR-100-5p |
CLASH |
23622248 |
MIRT048183 |
hsa-miR-196a-5p |
CLASH |
23622248 |
MIRT046333 |
hsa-miR-23b-3p |
CLASH |
23622248 |
MIRT045611 |
hsa-miR-149-5p |
CLASH |
23622248 |
MIRT044493 |
hsa-miR-320a |
CLASH |
23622248 |
MIRT044051 |
hsa-miR-362-5p |
CLASH |
23622248 |
MIRT043753 |
hsa-miR-328-3p |
CLASH |
23622248 |
MIRT042515 |
hsa-miR-423-3p |
CLASH |
23622248 |
MIRT040046 |
hsa-miR-615-3p |
CLASH |
23622248 |
MIRT037136 |
hsa-miR-877-3p |
CLASH |
23622248 |
MIRT972361 |
hsa-miR-340 |
CLIP-seq |
|
MIRT972362 |
hsa-miR-3688-3p |
CLIP-seq |
|
MIRT972363 |
hsa-miR-513a-3p |
CLIP-seq |
|
MIRT972364 |
hsa-miR-3144-3p |
CLIP-seq |
|
MIRT972365 |
hsa-miR-3941 |
CLIP-seq |
|
MIRT972366 |
hsa-miR-409-3p |
CLIP-seq |
|
MIRT972367 |
hsa-miR-466 |
CLIP-seq |
|
MIRT972368 |
hsa-miR-4672 |
CLIP-seq |
|
MIRT972369 |
hsa-miR-4731-3p |
CLIP-seq |
|
MIRT972370 |
hsa-miR-4777-5p |
CLIP-seq |
|
MIRT972371 |
hsa-miR-4801 |
CLIP-seq |
|
MIRT972372 |
hsa-miR-496 |
CLIP-seq |
|
MIRT972373 |
hsa-miR-518d-5p |
CLIP-seq |
|
MIRT972374 |
hsa-miR-519b-5p |
CLIP-seq |
|
MIRT972375 |
hsa-miR-519c-5p |
CLIP-seq |
|
MIRT972376 |
hsa-miR-520c-5p |
CLIP-seq |
|
MIRT972377 |
hsa-miR-526a |
CLIP-seq |
|
MIRT972378 |
hsa-miR-875-5p |
CLIP-seq |
|
MIRT972366 |
hsa-miR-409-3p |
CLIP-seq |
|
MIRT2448988 |
hsa-miR-1178 |
CLIP-seq |
|
MIRT2448989 |
hsa-miR-3936 |
CLIP-seq |
|
MIRT2448990 |
hsa-miR-4457 |
CLIP-seq |
|
MIRT2448991 |
hsa-miR-513b |
CLIP-seq |
|
MIRT2448988 |
hsa-miR-1178 |
CLIP-seq |
|
MIRT2526100 |
hsa-miR-1252 |
CLIP-seq |
|
MIRT2526101 |
hsa-miR-1264 |
CLIP-seq |
|
MIRT2526102 |
hsa-miR-2053 |
CLIP-seq |
|
MIRT972361 |
hsa-miR-340 |
CLIP-seq |
|
MIRT972362 |
hsa-miR-3688-3p |
CLIP-seq |
|
MIRT2526103 |
hsa-miR-3926 |
CLIP-seq |
|
MIRT2448989 |
hsa-miR-3936 |
CLIP-seq |
|
MIRT972366 |
hsa-miR-409-3p |
CLIP-seq |
|
MIRT2448990 |
hsa-miR-4457 |
CLIP-seq |
|
MIRT2526104 |
hsa-miR-4474-3p |
CLIP-seq |
|
MIRT2526105 |
hsa-miR-4528 |
CLIP-seq |
|
MIRT972363 |
hsa-miR-513a-3p |
CLIP-seq |
|
MIRT2448991 |
hsa-miR-513b |
CLIP-seq |
|
MIRT2526106 |
hsa-miR-548s |
CLIP-seq |
|
MIRT2526107 |
hsa-miR-663b |
CLIP-seq |
|
MIRT2448988 |
hsa-miR-1178 |
CLIP-seq |
|
MIRT2526100 |
hsa-miR-1252 |
CLIP-seq |
|
MIRT2526101 |
hsa-miR-1264 |
CLIP-seq |
|
MIRT2526102 |
hsa-miR-2053 |
CLIP-seq |
|
MIRT2680376 |
hsa-miR-299-5p |
CLIP-seq |
|
MIRT972361 |
hsa-miR-340 |
CLIP-seq |
|
MIRT972362 |
hsa-miR-3688-3p |
CLIP-seq |
|
MIRT2526103 |
hsa-miR-3926 |
CLIP-seq |
|
MIRT2448989 |
hsa-miR-3936 |
CLIP-seq |
|
MIRT972366 |
hsa-miR-409-3p |
CLIP-seq |
|
MIRT2448990 |
hsa-miR-4457 |
CLIP-seq |
|
MIRT2526104 |
hsa-miR-4474-3p |
CLIP-seq |
|
MIRT2526105 |
hsa-miR-4528 |
CLIP-seq |
|
MIRT972363 |
hsa-miR-513a-3p |
CLIP-seq |
|
MIRT2448991 |
hsa-miR-513b |
CLIP-seq |
|
MIRT2526106 |
hsa-miR-548s |
CLIP-seq |
|
MIRT2526107 |
hsa-miR-663b |
CLIP-seq |
|
|
Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
|
GO ID |
Ontology |
Definition |
Evidence |
Reference |
GO:0003712 |
Function |
Transcription coregulator activity |
IBA |
21873635 |
GO:0003723 |
Function |
RNA binding |
HDA |
22658674, 22681889 |
GO:0003723 |
Function |
RNA binding |
IBA |
21873635 |
GO:0005515 |
Function |
Protein binding |
IPI |
16189514, 16713569, 18320585, 18347058, 18509338, 21988832, 23455924, 23975937, 25416956, 25910212, 29892012, 31515488, 32814053 |
GO:0005516 |
Function |
Calmodulin binding |
IEA |
|
GO:0005634 |
Component |
Nucleus |
IBA |
21873635 |
GO:0005654 |
Component |
Nucleoplasm |
IDA |
|
GO:0005730 |
Component |
Nucleolus |
IDA |
|
GO:0005737 |
Component |
Cytoplasm |
IEA |
|
GO:0005886 |
Component |
Plasma membrane |
IEA |
|
GO:0006355 |
Process |
Regulation of transcription, DNA-templated |
IEA |
|
GO:0042802 |
Function |
Identical protein binding |
IPI |
21988832, 23975937 |
GO:0046872 |
Function |
Metal ion binding |
IEA |
|
|
Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
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|
Protein
|
UniProt ID |
Q01844 |
Protein name |
RNA-binding protein EWS (EWS oncogene) (Ewing sarcoma breakpoint region 1 protein) |
Protein function |
Binds to ssRNA containing the consensus sequence 5'-AGGUAA-3' (PubMed:21256132). Might normally function as a transcriptional repressor (PubMed:10767297). EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb ge |
PDB |
2CPE
|
Family and domains |
Pfam
Accession |
ID |
Position in sequence |
Description |
Type |
PF00076 |
RRM_1 |
363 → 441 |
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) |
Domain |
PF00641 |
zf-RanBP |
518 → 549 |
Zn-finger in Ran binding protein and others |
Domain |
|
Sequence |
MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTAT YGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGT QPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYP MQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSY PPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDNR GRGRGGFDRGGMSRGGRGGGRGGMGSAGERGGFNKPGGPMDEGPDLDLGPPVDPDEDSDN SAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDP PTAKAAVEWFDGKDFQGSKLKVSLARKKPPMNSMRGGLPPREGRGMPPPLRGGPGGPGGP GGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCPNPGCGNQNFAWRTEC NQCKAPKPEGFLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGGFR GGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPGKMDKGEHRQERRDRPY
|
|
Sequence length |
656 |
Interactions |
View interactions |
PathwaysPathway information has different metabolic/signaling pathways associated with genes. Each record is hyperlinked to a complete information page which also includes links to the KEGG/Reactome pathway database.
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Associated diseases
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Causal |
Disease name |
Disease term |
dbSNP ID |
References |
Amyotrophic lateral sclerosis |
Amyotrophic Lateral Sclerosis |
rs267607084, rs312262720, rs312262752, rs121908287, rs121908288, rs29001584, rs28941475, rs121434378, rs386134173, rs386134174, rs80356730, rs80356727, rs4884357, rs80356717, rs80356733, rs80356731, rs80356726, rs267606928, rs267606929, rs1885090126, rs121434591, rs121912431, rs121912432, rs121912433, rs121912434, rs121912435, rs121912440, rs121912436, rs121912437, rs121912438, rs121912439, rs74315452, rs121912442, rs121912443, rs121912444, rs121912446, rs121912447, rs1197141604, rs121912448, rs121912449, rs121912450, rs121912451, rs121912452, rs121912453, rs121912454, rs369600566, rs121912455, rs121912456, rs121912457, rs121912458, rs1555836889, rs121909667, rs121909668, rs121909669, rs121909671, rs121909535, rs121909537, rs121909538, rs121909539, rs121909540, rs121909542, rs121909544, rs80356734, rs367543041, rs80356740, rs80356719, rs80356721, rs80356723, rs80356725, rs387906627, rs387906628, rs387906709, rs387906710, rs387906711, rs387906829, rs387907264, rs387907265, rs387907266, rs312262739, rs312262709, rs312262749, rs200793464, rs147713329, rs312262788, rs397514262, rs63751180, rs587777132, rs730880025, rs730880026, rs730880027, rs368743618, rs730880029, rs730882255, rs730882256, rs786205611, rs121912441, rs199947197, rs780136067, rs772731615, rs879253926, rs879254294, rs764717219, rs886041390, rs750159428, rs753207473, rs267607087, rs767350733, rs778305085, rs1554707680, rs1554707622, rs1393363759, rs750959420, rs1555509569, rs1554716504, rs11556620, rs1247392012, rs142083484, rs140385286, rs749428135, rs371575563, rs1402429085, rs1218712729, rs1555179091, rs1555179087, rs746971952, rs1555836950, rs368276916, rs140376902, rs747220413, rs76731700, rs770684782, rs1200906022, rs1804449, rs1482760341, rs769898852, rs140599944, rs757972700, rs1555451521, rs1592362719, rs1555836803, rs763455928, rs1378590183, rs1583695322, rs1362178149, rs1197928094, rs368751524, rs1555509609, rs1574787779, rs1601157750, rs1301635320, rs1341055534, rs1402092579, rs1568809172, rs1555836170, rs1315541036, rs1339283341, rs1643659556, rs1644506661, rs1435710212, rs1553122918, rs1689580631, rs374047961, rs775935265, rs2076486420, rs1820836522, rs757260058, rs1844420892, rs1833371664, rs1833438306, rs1833451208, rs2083790483, rs1303294230, rs1226110412, rs2053207945, rs2053208751, rs2053501632, rs2053539304, rs1567479067, rs544088874, rs1228194239, rs1568807400, rs1169198442, rs2049594204, rs2049594311, rs1568810641, rs1568811372, rs2049618449, rs1476760624, rs2079347087 |
22454397 |
Anemia |
Anemia |
rs118204044, rs118204045, rs118204046, rs121918330, rs869320719, rs869312029, rs121918332, rs869320724, rs767094129, rs786205058, rs786205059, rs137853119, rs137853120, rs137853121, rs1384933966, rs137853122, rs137853123, rs786205060, rs267607121, rs121908584, rs80338697, rs80338699, rs120074166, rs120074167, rs1050828, rs74575103, rs137852314, rs5030868, rs137852316, rs137852317, rs137852318, rs137852319, rs137852320, rs137852321, rs137852322, rs137852323, rs137852324, rs72554665, rs387906468, rs5030872, rs137852326, rs137852333, rs137852327, rs137852328, rs137852329, rs137852330, rs137852331, rs137852332, rs137852334, rs137852335, rs137852336, rs137852339, rs76645461, rs137852340, rs137852341, rs78478128, rs137852343, rs137852344, rs137852345, rs587776730, rs137852346, rs137852347, rs137852349, rs2070404412, rs2070350038, rs2070350009, rs137852303, rs137852304, rs33946267, rs34378160, rs33933298, rs11549407, rs35724775, rs34598529, rs41469945, rs267607201, rs80338694, rs80338696, rs387907018, rs398123546, rs78365220, rs587777100, rs587777101, rs483352840, rs869312752, rs765487627, rs1557229599, rs1557230040, rs1555524842, rs782090947, rs1358275550, rs1557229736, rs1557230573, rs1556323334, rs1233124208, rs1293528130, rs146864395, rs1595503440, rs1603411214, rs137852325, rs1575247302, rs1603411177, rs1336651679, rs782322505 |
|
Melanoma |
Melanoma of soft tissue |
rs121913315, rs121913323, rs137853080, rs137853081, rs121909232, rs121913388, rs104894094, rs1563902635, rs104894095, rs104894097, rs104894098, rs104894099, rs104894109, rs137854599, rs11547328, rs104894340, rs398123152, rs587780668, rs587782083, rs587782206, rs587782792, rs180177042, rs121913381, rs730881675, rs730881674, rs730881677, rs730881673, rs1800586, rs768966657, rs587778189, rs786204195, rs121913321, rs45476696, rs864622636, rs864622263, rs869025340, rs876660436, rs876658534, rs876658556, rs878853647, rs878853644, rs878853650, rs886041162, rs121913389, rs1057519852, rs121913384, rs121913387, rs1060501266, rs1060501263, rs1060501262, rs749714198, rs1060501265, rs559848002, rs1064794292, rs1131691187, rs1131691186, rs199907548, rs1554654052, rs1554656411, rs1554656624, rs1554653915, rs1554653956, rs1554656253, rs1554654224, rs754806883, rs1057520039, rs1563889584, rs1563889685, rs1287464120, rs1563888944, rs1563892715, rs1563889847, rs141798398, rs1587332338, rs1587340291, rs11552823, rs561034503, rs138677674, rs1819962958, rs1820531050 |
|
Prostate cancer |
Malignant neoplasm of prostate |
rs121909139, rs121909140, rs121909141, rs121909142, rs121909143, rs606231169, rs606231170, rs137852584, rs137852578, rs137852580, rs137852581, rs137852582 |
27783944 |
Sarcoma |
Clear Cell Sarcoma of Soft Tissue, Sarcoma |
rs11540652, rs104886003, rs137852790, rs1555927374 |
19561568 |
|
Unknown |
Disease name |
Disease term |
dbSNP ID |
References |
Central nervous system neoplasms |
Central Nervous System Neoplasms |
|
|
Cerebral primitive neuroectodermal tumor |
Cerebral Primitive Neuroectodermal Tumor |
|
12162413 |
Desmoplastic tumor |
Desmoplastic Small Round Cell Tumor |
rs371163866 |
|
Ependymoblastoma |
Ependymoblastoma |
|
12162413 |
Ewing sarcoma |
Ewings sarcoma |
|
26214589, 27006472, 16646077 |
Extra-osseous ewing`s sarcoma |
Extra-osseous Ewing`s sarcoma |
|
21113140 |
Extraskeletal ewing sarcoma |
Extraskeletal Ewing sarcoma |
|
|
Extraskeletal myxoid chondrosarcoma |
Extraskeletal Myxoid Chondrosarcoma |
|
18855877 |
Ileus |
Ileus |
|
|
Lung neoplasms |
Lung Neoplasms |
|
|
Mediastinal lymphadenopathy |
Mediastinal lymphadenopathy |
|
|
Medulloepithelioma |
Medulloepithelioma |
|
12162413 |
Neuroectodermal tumors |
Neuroectodermal Tumor, Primitive |
|
12162413 |
Ovarian neoplasm |
ovarian neoplasm |
|
|
Pancreatic neoplasm |
Pancreatic Neoplasm |
|
|
Prostatic neoplasms |
Prostatic Neoplasms |
|
27783944 |
Skeletal ewing sarcoma |
Skeletal Ewing sarcoma |
|
|
Spongioblastoma |
Spongioblastoma |
|
12162413 |
Testicular neoplasms |
Testicular Neoplasms |
|
|
|
|
|