ADAMTS17 (ADAM metallopeptidase with thrombospondin type 1 motif 17)
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Gene
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Entrez ID
Entrez Gene ID - the GENE ID in NCBI Gene database.
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170691 |
Gene nameGene Name - the full gene name approved by the HGNC.
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ADAM metallopeptidase with thrombospondin type 1 motif 17 |
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
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ADAMTS17 |
SynonymsGene synonyms aliases
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WMS4 |
ChromosomeChromosome number
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15 |
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
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15q26.3 |
SummarySummary of gene provided in NCBI Entrez Gene.
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This gene encodes a member of the ADAMTS (a disintegrin and metalloproteinase with thrombospondin motifs) protein family. ADAMTS family members share several distinct protein modules, including a propeptide region, a metalloproteinase domain, a disintegri |
SNPsSNP information provided by dbSNP.
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SNP ID |
Visualize variation |
Clinical significance |
Consequence |
rs11277519 |
GGCTTG>-,GGCTTGGGCTTG |
Conflicting-interpretations-of-pathogenicity |
3 prime UTR variant, genic downstream transcript variant |
rs267606638 |
G>A |
Pathogenic |
Coding sequence variant, non coding transcript variant, genic upstream transcript variant, stop gained |
rs387906291 |
->C |
Pathogenic |
Coding sequence variant, genic downstream transcript variant, splice acceptor variant |
rs749116256 |
C>T |
Pathogenic |
Splice donor variant, intron variant |
rs1160509052 |
C>A,T |
Pathogenic |
Splice donor variant, genic upstream transcript variant |
rs1555501030 |
C>- |
Pathogenic |
5 prime UTR variant, non coding transcript variant, genic upstream transcript variant, coding sequence variant, frameshift variant |
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miRNAmiRNA information provided by mirtarbase database.
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Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
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Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
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Protein
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UniProt ID |
Q8TE56 |
Protein name |
A disintegrin and metalloproteinase with thrombospondin motifs 17 (ADAM-TS 17) (ADAM-TS17) (ADAMTS-17) (EC 3.4.24.-) |
Family and domains |
Pfam
Accession |
ID |
Position in sequence |
Description |
Type |
PF01562 |
Pep_M12B_propep |
36 → 180 |
Reprolysin family propeptide |
Family |
PF01421 |
Reprolysin |
338 → 452 |
Reprolysin (M12B) family zinc metalloprotease |
Domain |
PF17771 |
ADAM_CR_2 |
466 → 533 |
ADAM cysteine-rich domain |
Domain |
PF00090 |
TSP_1 |
547 → 597 |
Thrombospondin type 1 domain |
Domain |
PF05986 |
ADAM_spacer1 |
707 → 783 |
ADAM-TS Spacer 1 |
Family |
PF19030 |
TSP1_ADAMTS |
804 → 861 |
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Domain |
PF19030 |
TSP1_ADAMTS |
865 → 921 |
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Domain |
PF19030 |
TSP1_ADAMTS |
925 → 973 |
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Domain |
PF19030 |
TSP1_ADAMTS |
976 → 1028 |
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Domain |
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Sequence |
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Sequence length |
1095 |
Interactions |
View interactions |
PathwaysPathway information has different metabolic/signaling pathways associated with genes. Each record is hyperlinked to a complete information page which also includes links to the KEGG/Reactome pathway database.
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Associated diseases
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Causal |
Disease name |
Disease term |
dbSNP ID |
References |
Carpal tunnel syndrome |
Carpal Tunnel Syndrome |
rs28936368, rs121918088 |
30833571 |
Ectopia lentis |
Ectopia Lentis |
rs118203985, rs137854464, rs137854480, rs587776927, rs199473693, rs794726688, rs368482584, rs794726689, rs747160538, rs397514558, rs397515793, rs757318536, rs781691587, rs363806 |
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Glaucoma |
Glaucoma |
rs121918355, rs1566660365, rs1566635134, rs121918356, rs1566634475, rs28936700, rs55771538, rs28936701, rs104893622, rs55989760, rs72549387, rs104893628, rs2125316417, rs104893629, rs74315328, rs121909193, rs74315330, rs74315329, rs74315332, rs74315334, rs74315336, rs74315338, rs74315341, rs121909194, rs74315331, rs1558603396, rs387907175, rs587778873, rs587778875, rs104894979, rs137854895, rs766425037, rs72549380, rs148542782, rs541217363, rs753021890, rs771076928, rs56010818, rs777678299, rs1446110883, rs1573274915, rs1587545234, rs751768343, rs944452644 |
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Myopia |
Myopia |
rs387907109, rs146936371, rs587776903, rs786205127, rs398122836, rs199624584, rs587777625, rs786205216, rs758872875, rs764211125, rs1135402746, rs765658563, rs1555941129, rs1555941116, rs199923805, rs782555528, rs1554862601, rs1586620121, rs1387950081, rs2051026773, rs1422332023 |
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Weill-marchesani syndrome |
Weill-Marchesani-Like Syndrome |
rs121434357, rs431825170, rs387906266, rs121434359, rs267606636, rs267606637, rs387906291, rs267606638, rs749116256, rs1555396783, rs137854856, rs267606798, rs727503056, rs1555501030, rs1160509052, rs363806, rs2043337073 |
30712880, 19836009 |
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Unknown |
Disease name |
Disease term |
dbSNP ID |
References |
Dwarfism |
Dwarfism |
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Ichthyosis-short stature-brachydactyly-microspherophakia syndrome |
Ichthyosis-short stature-brachydactyly-microspherophakia syndrome |
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Iridodonesis |
Iridodonesis |
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Liver neoplasms |
Liver neoplasms |
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19233941 |
Liver cancer |
Malignant neoplasm of liver |
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19233941 |
Ocular hypertension |
Ocular Hypertension |
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Osteosarcoma |
Osteosarcoma |
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23727862 |
Phacodonesis |
Phacodonesis |
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