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CCDC80 (coiled-coil domain containing 80)

Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
151887
Gene nameGene Name - the full gene name approved by the HGNC.
Coiled-coil domain containing 80
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
CCDC80
SynonymsGene synonyms aliases
CL2, DRO1, LINC01279, SSG1, URB, okuribin
ChromosomeChromosome number
3
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
3q13.2
miRNAmiRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT697005 hsa-miR-508-5p HITS-CLIP 23313552
MIRT697004 hsa-miR-1910-3p HITS-CLIP 23313552
MIRT697003 hsa-miR-6511a-5p HITS-CLIP 23313552
MIRT697002 hsa-miR-4257 HITS-CLIP 23313552
MIRT697001 hsa-miR-1273g-3p HITS-CLIP 23313552
Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0001968 Function Fibronectin binding IEA
GO:0005604 Component Basement membrane IEA
GO:0005614 Component Interstitial matrix IEA
GO:0008201 Function Heparin binding IEA
GO:0009617 Process Response to bacterium IEA
Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM
HGNC
e!Ensembl
Protein
UniProt ID Q76M96
Protein name Coiled-coil domain-containing protein 80 (Down-regulated by oncogenes protein 1) (Up-regulated in BRS-3 deficient mouse homolog)
Protein function Promotes cell adhesion and matrix assembly.
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF13778 DUF4174
141 270
Domain of unknown function (DUF4174)
Family
PF13778 DUF4174
615 749
Domain of unknown function (DUF4174)
Family
PF13778 DUF4174
771 902
Domain of unknown function (DUF4174)
Family
Sequence
MTWRMGPRFTMLLAMWLVCGSEPHPHATIRGSHGGRKVPLVSPDSSRPARFLRHTGRSRG
IERSTLEEPNLQPLQRRRSVPVLRLARPTEPPARSDINGAAVRPEQRPAARGSPREMIRD
EGSSARSRMLRFPSGSSSPNILASFAGKNRVWVISAPHASEGYYRLMMSLLKDDVYCELA
ERHIQQIVLFHQAGEEGGKVRRITSEGQILEQPLDPSLIPKLMSFLKLEKGKFGMVLLKK
TLQVEERYPYPVRLEAMYEVIDQGPIRRIE
KIRQKGFVQKCKASGVEGQVVAEGNDGGGG
AGRPSLGSEKKKEDPRRAQVPPTRESRVKVLRKLAATAPALPQPPSTPRATTLPPAPATT
VTRSTSRAVTVAARPMTTTAFPTTQRPWTPSPSHRPPTTTEVITARRPSVSENLYPPSRK
DQHRERPQTTRRPSKATSLESFTNAPPTTISEPSTRAAGPGRFRDNRMDRREHGHRDPNV
VPGPPKPAKEKPPKKKAQDKILSNEYEEKYDLSRPTASQLEDELQVGNVPLKKAKESKKH
EKLEKPEKEKKKKMKNENADKLLKSEKQMKKSEKKSKQEKEKSKKKKGGKTEQDGYQKPT
NKHFTQSPKKSVADLLGSFEGKRRLLLITAPKAENNMYVQQRDEYLESFCKMATRKISVI
TIFGPVNNSTMKIDHFQLDNEKPMRVVDDEDLVDQRLISELRKEYGMTYNDFFMVLTDVD
LRVKQYYEVPITMKSVFDLIDTFQSRIKD
MEKQKKEGIVCKEDKKQSLENFLSRFRWRRR
LLVISAPNDEDWAYSQQLSALSGQACNFGLRHITILKLLGVGEEVGGVLELFPINGSSVV
EREDVPAHLVKDIRNYFQVSPEYFSMLLVGKDGNVKSWYPSPMWSMVIVYDLIDSMQLRR
QE
MAIQQSLGMRCPEDEYAGYGYHSYHQGYQDGYQDDYRHHESYHHGYPY
Sequence length 950
Interactions View interactions
Associated diseases
Causal
Disease name Disease term dbSNP ID References
Dermatitis Dermatitis, Atopic rs61816761, rs150597413, rs138726443, rs201356558, rs149484917, rs372754256, rs747301529, rs567795279, rs745915174 23042114
Intracranial aneurysm Intracranial Aneurysm rs1594095223 29531279
Unknown
Disease name Disease term dbSNP ID References
Eczema Eczema, Infantile 23042114

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