Gene
|
Entrez ID
Entrez Gene ID - the GENE ID in NCBI Gene database.
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130399 |
Gene nameGene Name - the full gene name approved by the HGNC.
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Activin A receptor type 1C |
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
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ACVR1C |
SynonymsGene synonyms aliases
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ACVRLK7, ALK7 |
ChromosomeChromosome number
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2 |
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
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2q24.1 |
SummarySummary of gene provided in NCBI Entrez Gene.
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ACVR1C is a type I receptor for the TGFB (see MIM 190180) family of signaling molecules. Upon ligand binding, type I receptors phosphorylate cytoplasmic SMAD transcription factors, which then translocate to the nucleus and interact directly with DNA or in |
miRNAmiRNA information provided by mirtarbase database.
|
miRTarBase ID |
miRNA |
Experiments |
Reference |
MIRT005775 |
hsa-miR-376c-3p |
Luciferase reporter assay, Western blot |
21224400 |
MIRT005775 |
hsa-miR-376c-3p |
Luciferase reporter assay, Western blot |
21224400 |
MIRT005775 |
hsa-miR-376c-3p |
Luciferase reporter assay, Western blot |
21224400 |
MIRT005775 |
hsa-miR-376c-3p |
Luciferase reporter assay, Western blot |
21224400 |
MIRT005776 |
hsa-miR-376a-3p |
Luciferase reporter assay |
21224400 |
MIRT005777 |
hsa-miR-376a-5p |
Luciferase reporter assay |
21224400 |
MIRT005778 |
hsa-miR-376b-3p |
Luciferase reporter assay |
21224400 |
MIRT005779 |
hsa-miR-22-3p |
Luciferase reporter assay, Western blot |
21224400 |
MIRT005775 |
hsa-miR-376c-3p |
Luciferase reporter assay |
21224400 |
MIRT005780 |
hsa-miR-412-3p |
Luciferase reporter assay |
21224400 |
MIRT005781 |
hsa-miR-147a |
Luciferase reporter assay |
21224400 |
MIRT005781 |
hsa-miR-147a |
Luciferase reporter assay |
21224400 |
MIRT005782 |
hsa-miR-122-5p |
Luciferase reporter assay |
21224400 |
MIRT005780 |
hsa-miR-412-3p |
Reporter assay |
21224400 |
MIRT005778 |
hsa-miR-376b-3p |
Reporter assay;Western blot |
21224400 |
MIRT005776 |
hsa-miR-376a-3p |
Reporter assay;Western blot |
21224400 |
MIRT005777 |
hsa-miR-376a-5p |
Reporter assay;Western blot |
21224400 |
MIRT005775 |
hsa-miR-376c-3p |
Reporter assay;Western blot;qRT-PCR |
21224400 |
MIRT005782 |
hsa-miR-122-5p |
Reporter assay |
21224400 |
MIRT005781 |
hsa-miR-147a |
Reporter assay |
21224400 |
MIRT005779 |
hsa-miR-22-3p |
Reporter assay;Western blot |
21224400 |
MIRT005775 |
hsa-miR-376c-3p |
Luciferase reporter assay, qRT-PCR, Western blot |
23424236 |
MIRT005775 |
hsa-miR-376c-3p |
Luciferase reporter assay, qRT-PCR, Western blot |
23424236 |
MIRT539489 |
hsa-miR-323a-3p |
PAR-CLIP |
22012620 |
MIRT539488 |
hsa-miR-4699-3p |
PAR-CLIP |
22012620 |
MIRT539487 |
hsa-miR-8063 |
PAR-CLIP |
22012620 |
MIRT539486 |
hsa-miR-4698 |
PAR-CLIP |
22012620 |
MIRT539485 |
hsa-miR-4639-3p |
PAR-CLIP |
22012620 |
MIRT539484 |
hsa-miR-676-5p |
PAR-CLIP |
22012620 |
MIRT539483 |
hsa-miR-6837-3p |
PAR-CLIP |
22012620 |
MIRT539482 |
hsa-miR-3682-5p |
PAR-CLIP |
22012620 |
MIRT539481 |
hsa-miR-6794-3p |
PAR-CLIP |
22012620 |
MIRT735689 |
hsa-miR-548c-3p |
Western blotting, Immunofluorescence, qRT-PCR |
33114016 |
MIRT539489 |
hsa-miR-323a-3p |
PAR-CLIP |
22012620 |
MIRT539488 |
hsa-miR-4699-3p |
PAR-CLIP |
22012620 |
MIRT539487 |
hsa-miR-8063 |
PAR-CLIP |
22012620 |
MIRT539486 |
hsa-miR-4698 |
PAR-CLIP |
22012620 |
MIRT539485 |
hsa-miR-4639-3p |
PAR-CLIP |
22012620 |
MIRT539484 |
hsa-miR-676-5p |
PAR-CLIP |
22012620 |
MIRT539483 |
hsa-miR-6837-3p |
PAR-CLIP |
22012620 |
MIRT539482 |
hsa-miR-3682-5p |
PAR-CLIP |
22012620 |
MIRT539481 |
hsa-miR-6794-3p |
PAR-CLIP |
22012620 |
MIRT765043 |
hsa-let-7a |
CLIP-seq |
|
MIRT765044 |
hsa-let-7b |
CLIP-seq |
|
MIRT765045 |
hsa-let-7c |
CLIP-seq |
|
MIRT765046 |
hsa-let-7d |
CLIP-seq |
|
MIRT765047 |
hsa-let-7e |
CLIP-seq |
|
MIRT765048 |
hsa-let-7f |
CLIP-seq |
|
MIRT765049 |
hsa-let-7g |
CLIP-seq |
|
MIRT765050 |
hsa-let-7i |
CLIP-seq |
|
MIRT765051 |
hsa-miR-1179 |
CLIP-seq |
|
MIRT765052 |
hsa-miR-1245b-3p |
CLIP-seq |
|
MIRT765053 |
hsa-miR-1283 |
CLIP-seq |
|
MIRT765054 |
hsa-miR-1290 |
CLIP-seq |
|
MIRT765055 |
hsa-miR-1304 |
CLIP-seq |
|
MIRT765056 |
hsa-miR-137 |
CLIP-seq |
|
MIRT765057 |
hsa-miR-202 |
CLIP-seq |
|
MIRT765058 |
hsa-miR-217 |
CLIP-seq |
|
MIRT765059 |
hsa-miR-218 |
CLIP-seq |
|
MIRT765060 |
hsa-miR-3129-3p |
CLIP-seq |
|
MIRT765061 |
hsa-miR-3148 |
CLIP-seq |
|
MIRT765062 |
hsa-miR-3167 |
CLIP-seq |
|
MIRT765063 |
hsa-miR-3184 |
CLIP-seq |
|
MIRT765064 |
hsa-miR-3185 |
CLIP-seq |
|
MIRT765065 |
hsa-miR-337-3p |
CLIP-seq |
|
MIRT765066 |
hsa-miR-3613-3p |
CLIP-seq |
|
MIRT765067 |
hsa-miR-376c |
CLIP-seq |
|
MIRT765068 |
hsa-miR-3927 |
CLIP-seq |
|
MIRT765069 |
hsa-miR-3940-3p |
CLIP-seq |
|
MIRT765070 |
hsa-miR-3942-3p |
CLIP-seq |
|
MIRT765071 |
hsa-miR-423-5p |
CLIP-seq |
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MIRT765072 |
hsa-miR-4263 |
CLIP-seq |
|
MIRT765073 |
hsa-miR-4418 |
CLIP-seq |
|
MIRT765074 |
hsa-miR-4458 |
CLIP-seq |
|
MIRT765075 |
hsa-miR-4500 |
CLIP-seq |
|
MIRT765076 |
hsa-miR-452 |
CLIP-seq |
|
MIRT765077 |
hsa-miR-4521 |
CLIP-seq |
|
MIRT765078 |
hsa-miR-4650-3p |
CLIP-seq |
|
MIRT765079 |
hsa-miR-4653-3p |
CLIP-seq |
|
MIRT765080 |
hsa-miR-4668-5p |
CLIP-seq |
|
MIRT765081 |
hsa-miR-4676-3p |
CLIP-seq |
|
MIRT765082 |
hsa-miR-4693-5p |
CLIP-seq |
|
MIRT765083 |
hsa-miR-4735-5p |
CLIP-seq |
|
MIRT765084 |
hsa-miR-4738-3p |
CLIP-seq |
|
MIRT765085 |
hsa-miR-4768-3p |
CLIP-seq |
|
MIRT765086 |
hsa-miR-4773 |
CLIP-seq |
|
MIRT765087 |
hsa-miR-4775 |
CLIP-seq |
|
MIRT765088 |
hsa-miR-487a |
CLIP-seq |
|
MIRT765089 |
hsa-miR-509-3-5p |
CLIP-seq |
|
MIRT765090 |
hsa-miR-509-5p |
CLIP-seq |
|
MIRT765091 |
hsa-miR-539 |
CLIP-seq |
|
MIRT765092 |
hsa-miR-582-5p |
CLIP-seq |
|
MIRT765093 |
hsa-miR-590-3p |
CLIP-seq |
|
MIRT765094 |
hsa-miR-636 |
CLIP-seq |
|
MIRT765095 |
hsa-miR-876-5p |
CLIP-seq |
|
MIRT765096 |
hsa-miR-98 |
CLIP-seq |
|
MIRT765072 |
hsa-miR-4263 |
CLIP-seq |
|
MIRT765076 |
hsa-miR-452 |
CLIP-seq |
|
MIRT765077 |
hsa-miR-4521 |
CLIP-seq |
|
MIRT765079 |
hsa-miR-4653-3p |
CLIP-seq |
|
MIRT765081 |
hsa-miR-4676-3p |
CLIP-seq |
|
MIRT765082 |
hsa-miR-4693-5p |
CLIP-seq |
|
MIRT765086 |
hsa-miR-4773 |
CLIP-seq |
|
MIRT1545064 |
hsa-miR-3609 |
CLIP-seq |
|
MIRT1545065 |
hsa-miR-548ah |
CLIP-seq |
|
MIRT1545066 |
hsa-miR-605 |
CLIP-seq |
|
MIRT1925394 |
hsa-miR-2052 |
CLIP-seq |
|
MIRT1925395 |
hsa-miR-2054 |
CLIP-seq |
|
MIRT1925396 |
hsa-miR-4517 |
CLIP-seq |
|
MIRT1925397 |
hsa-miR-5096 |
CLIP-seq |
|
MIRT765086 |
hsa-miR-4773 |
CLIP-seq |
|
MIRT2443109 |
hsa-miR-155 |
CLIP-seq |
|
MIRT2443110 |
hsa-miR-2116 |
CLIP-seq |
|
MIRT765076 |
hsa-miR-452 |
CLIP-seq |
|
MIRT765081 |
hsa-miR-4676-3p |
CLIP-seq |
|
MIRT2443111 |
hsa-miR-4793-5p |
CLIP-seq |
|
MIRT1925397 |
hsa-miR-5096 |
CLIP-seq |
|
MIRT2443112 |
hsa-miR-570 |
CLIP-seq |
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Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
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Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
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Protein
|
UniProt ID |
Q8NER5 |
Protein name |
Activin receptor type-1C (EC 2.7.11.30) (Activin receptor type IC) (ACTR-IC) (Activin receptor-like kinase 7) (ALK-7) |
Protein function |
Serine/threonine protein kinase which forms a receptor complex on ligand binding. The receptor complex consists of 2 type II and 2 type I transmembrane serine/threonine kinases. Type II receptors phosphorylate and activate type I receptors which |
Family and domains |
Pfam
Accession |
ID |
Position in sequence |
Description |
Type |
PF01064 |
Activin_recp |
26 → 96 |
Activin types I and II receptor domain |
Domain |
PF08515 |
TGF_beta_GS |
166 → 193 |
Transforming growth factor beta type I GS-motif |
Family |
PF07714 |
PK_Tyr_Ser-Thr |
195 → 482 |
Protein tyrosine and serine/threonine kinase |
Domain |
|
Sequence |
|
Sequence length |
493 |
Interactions |
View interactions |
PathwaysPathway information has different metabolic/signaling pathways associated with genes. Each record is hyperlinked to a complete information page which also includes links to the KEGG/Reactome pathway database.
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Associated diseases
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Causal |
Disease name |
Disease term |
dbSNP ID |
References |
Lung carcinoma |
Squamous cell carcinoma of lung |
rs1805076, rs121909071, rs121913530, rs112445441, rs121913529, rs121913535, rs121913297, rs121913279, rs104886003, rs397516975, rs11554290, rs121913364, rs121913351, rs121913369, rs121913355, rs121912470, rs121913273, rs121913281, rs121913348, rs727503093, rs121913353, rs397516890, rs397516896, rs121913378, rs397516897, rs397516977, rs397516978, rs397516979, rs397516980, rs397516981, rs397516982, rs121913240, rs17851045, rs397517086, rs121913428, rs397517094, rs397517098, rs397517106, rs121913465, rs397517108, rs397517111, rs397517112, rs397517114, rs397517116, rs1554350366, rs397517127, rs397517200, rs397517202, rs121913283, rs121913370, rs121913357, rs727503106, rs121913238, rs727503108, rs397517040, rs397516976, rs1555618025, rs1057519729, rs1584238193 |
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