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FAT3 (FAT atypical cadherin 3)

Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
120114
Gene nameGene Name - the full gene name approved by the HGNC.
FAT atypical cadherin 3
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
FAT3
SynonymsGene synonyms aliases
CDHF15, CDHR10, hFat3
ChromosomeChromosome number
11
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
11q14.3
miRNAmiRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT020303 hsa-miR-130b-3p Sequencing 20371350
MIRT021824 hsa-miR-132-3p Microarray 17612493
MIRT031285 hsa-miR-19b-3p Sequencing 20371350
MIRT031999 hsa-miR-16-5p Sequencing 20371350
MIRT038339 hsa-miR-296-3p CLASH 23622248
Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0005509 Function Calcium ion binding IEA
GO:0005886 Component Plasma membrane IEA
GO:0007156 Process Homophilic cell adhesion via plasma membrane adhesion molecules IEA
GO:0007275 Process Multicellular organism development IEA
GO:0016021 Component Integral component of membrane IEA
Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM
HGNC
e!Ensembl
Protein
UniProt ID Q8TDW7
Protein name Protocadherin Fat 3 (hFat3) (Cadherin family member 15) (FAT tumor suppressor homolog 3)
Protein function May play a role in the interactions between neurites derived from specific subsets of neurons during development.
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00028 Cadherin
163 257
Cadherin domain
Domain
PF00028 Cadherin
477 569
Cadherin domain
Domain
PF00028 Cadherin
731 822
Cadherin domain
Domain
PF00028 Cadherin
836 927
Cadherin domain
Domain
PF00028 Cadherin
941 1032
Cadherin domain
Domain
PF00028 Cadherin
1048 1139
Cadherin domain
Domain
PF00028 Cadherin
1153 1245
Cadherin domain
Domain
PF00028 Cadherin
1259 1348
Cadherin domain
Domain
PF00028 Cadherin
1465 1557
Cadherin domain
Domain
PF00028 Cadherin
1571 1662
Cadherin domain
Domain
PF00028 Cadherin
1676 1760
Cadherin domain
Domain
PF00028 Cadherin
1774 1872
Cadherin domain
Domain
PF00028 Cadherin
1987 2075
Cadherin domain
Domain
PF00028 Cadherin
2089 2179
Cadherin domain
Domain
PF00028 Cadherin
2191 2278
Cadherin domain
Domain
PF00028 Cadherin
2292 2385
Cadherin domain
Domain
PF00028 Cadherin
2399 2487
Cadherin domain
Domain
PF00028 Cadherin
2501 2591
Cadherin domain
Domain
PF00028 Cadherin
2605 2699
Cadherin domain
Domain
PF00028 Cadherin
2819 2915
Cadherin domain
Domain
PF00028 Cadherin
2929 3020
Cadherin domain
Domain
PF00028 Cadherin
3034 3121
Cadherin domain
Domain
PF00028 Cadherin
3136 3227
Cadherin domain
Domain
PF00028 Cadherin
3241 3332
Cadherin domain
Domain
PF00028 Cadherin
3346 3437
Cadherin domain
Domain
PF00028 Cadherin
3451 3542
Cadherin domain
Domain
PF02210 Laminin_G_2
3865 3994
Laminin G domain
Domain
Sequence
MDIIMGHCVGTRPPACCLILLLFKLLATVSQGLPGTGPLGFHFTHSIYNATVYENSAART
YVNSQSRMGITLIDLSWDIKYRIVSGDEEGFFKAEEVIIADFCFLRIRTKGGNSAILNRE
IQDNYLLIVKGSVRGEDLEAWTKVNIQVLDMNDLRPLFSPTTYSVTIAESTPLRTSVAQV
TATDADIGSNGEFYYYFKNKVDLFSVHPTSGVISLSGRLNYDEKNRYDLEILAVDRGMKL
YGNNGVSSTAKLYVHIE
RINEHAPTIHVVTHVPFSLEKEPTYAVVTVDDLDDGANGEIES
VSIVAGDPLDQFFLAKEGKWLNEYKIKERKQIDWESFPYGYNLTLQAKDKGSPQKCSALK
AVYIGNPTRDTVPIRFEKEVYDVSISEFSPPGVVVAIVKLSPEPIDVEYKLSPGEDAVYF
KINPRSGLIVTARPLNTVKKEVYKLEVTNKEGDLKAQVTISIEDANDHTPEFQQPLYDAY
VNESVPVGTSVLTVSASDKDKGENGYITYSIASLNLLPFVINQFTGVISTTEELDFESSP
EIYRFIVRASDWGSPYRHESEVNVTIRIG
NVNDNSPLFEKVACQGVISYDFPVGGHITAV
SAIDIDELELVKYKIISGNELGFFYLNPDSGVLQLKKSLTNSGIKNGNFALRITATDGEN
LADPMSINISVLHGKVSSKSFSCRETRVAQKLAEKLLIKAKANGKLNLEDGFLDFYSINR
QGPYFDKSFPSDVAVKEDLPVGANILKIKAYDADSGFNGKVLFTISDGNTDSCFNIDMET
GQLKVLMPMDREHTDLYLLNITIYDLGNPQKSSWRLLTINVE
DANDNSPVFIQDSYSVNI
LESSGIGTEIIQVEARDKDLGSNGEVTYSVLTDTQQFAINSSTGIVYVADQLDRESKANY
SLKIEARDKAESGQQLFSVVTLKVFLD
DVNDCSPAFIPSSYSVKVLEDLPVGTVIAWLET
HDPDLGLGGQVRYSLVNDYNGRFEIDKASGAIRLSKELDYEKQQFYNLTVRAKDKGRPVS
LSSVSFVEVEVV
DVNENLHTPYFPDFAVVGSVKENSRIGTSVLQVTARDEDSGRDGEIQY
SIRDGSGLGRFSIDDESGVITAADILDRETMGSYWLTVYATDRGVVPLYSTIEVYIEVE
D
VNDNAPLTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSSNEKLTYRITSGNPQNFFAINI
KTGLITTTSRKLDREQQAEHFLEVTVTDGGPSPKQSTIWVVVQVL
DENDNKPQFPEKVYQ
IKLPERDRKKRGEPIYRAFAFDRDEGPNAEISYSIVDGNDDGKFFIDPKTGMVSSRKQFT
AGSYDILTIKAVDNGRPQKSSTARLHIE
WIKKPPPSPIPLTFDEPFYNFTVMESDRVTEI
VGVVSVQPANTPLWFDIVGGNFDSAFDAEKGVGTIVIAKPLDAEQRSIYNMSVEVTDGTN
VAVTQVFIKVLDNNDNGPEFSQPNYDVTISEDVLPDTEILQIEATDRDEKHKLSYTVHSS
IDSISMRKFRIDPSTGVLYTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVE
DAN
DHSPYFTNPLYEASVFESAALGSAVLQVTALDKDKGENAELIYTIEAGNTGNMFKIEPVL
GIITICKEPDMTTMGQFVLSIKVTDQGSPPMSATAIVRISVT
MSDNSHPKFIHKDYQAEV
NENVDIGTSVILISAISQSTLIYEVKDGDINGIFTINPYSGVITTQKALDYERTSSYQLI
IQATNMAGMASNATVNIQIV
DENDNAPVFLFSQYSGSLSEAAPINSIVRSLDNSPLVIRA
TDADSNRNALLVYQIVESTAKKFFTVDSSTGAIRTIANLDHETIAHFHFHVHVRDSGSPQ
LTAESPVEVNIE
VTDVNDNPPVFTQAVFETILLLPTYVGVEVLKVSATDPDSEVPPELTY
SLMEGSLDHFLIDSNSGVLTIKNNNLSKDHYMLIVKVSDGKFYSTSMVTIMVKEAMDSGL
HFTQSFYSTSISENNTNITKVAIVNAVGNRLNEPLKYSILNPGNKFKIKSTSGVIQTTGV
PFDREEQELYELVVEASRELDHLRVARVVVRVNIE
DINDNSPVFVGLPYYAAVQVDAEPG
TLIYQVTAIDKDKGPNGEVTYVLQDDYGHFEINPNSGNVILKEAFNSDLSNIEYGVTILA
KDGGKPSLSTSVELPITIV
NKAMPVFDKPFYTASVNEDIRMNTPILSINATSPEGQGIIY
IIIDGDPFKQFNIDFDTGVLKVVSPLDYEVTSAYKLTIRASDALTGARAEVTVDLLVN
DV
NDNPPIFDQPTYNTTLSEASLIGTPVLQVVSIDADSENNKMVHYQIVQDTYNSTDYFHID
SSSGLILTARMLDHELVQHCTLKVRSIDSGFPSLSSEVLVHIYIS
DVNDNPPVFNQLIYE
SYVSELAPRGHFVTCVQASDADSSDFDRLEYSILSGNDRTSFLMDSKSGVITLSNHRKQR
MEPLYSLNVSVSDGLFTSTAQVHIRVL
GANLYSPAFSQSTYVAEVRENVAAGTKVIHVRA
TDGDPGTYGQISYAIINDFAKDRFLIDSNGQVITTERLDRENPLEGDVSIFVRALDGGGR
TTFCTVRVIVV
DENDNAPQFMTVEYRASVRADVGRGHLVTQVQAIDPDDGANSRITYSLY
SEASVSVADLLEIDPDNGWMVTKGNFNQLKNTVLSFFVKAVDGGIPVKHSLIPVYIHVL
P
PETFLPSFTQSQYSFTIAEDTAIGSTVDTLRILPSQNVWFSTVNGERPENNKGGIFVIEQ
ETGTIKLDKRLDRETSPAFHFKVAATIPLDKVDIVFTVDVDIKVLDLNDNKPVFETSSYD
TIIMEGMPVGTKLTQVRAIDMDWGANGQVTYSLHSDSQPEKVMEAFNIDSNTGWISTLKD
LDHETDPTFTFSVVASDLGEAFSLSSTALVSVRVT
DINDNAPVFAQEVYRGNVKESDPPG
EVVAVLSTWDRDTSDVNRQVSYHITGGNPRGRFALGLVQSEWKVYVKRPLDREEQDIYFL
NITATDGLFVTQAMVEVSVS
DVNDNSPVCDQVAYTALLPEDIPSNKIILKVSAKDADIGS
NGYIRYSLYGSGNSEFFLDPESGELKTLALLDRERIPVYSLMAKATDGGGRFCQSNIHLI
L
EDVNDNPPVFSSDHYNTCVYENTATKALLTRVQAVDPDIGINRKVVYSLADSAGGVFSI
DSSSGIIILEQPLDREQQSSYNISVRATDQSPGQSLSSLTTVTITVL
DINDNPPVFERRD
YLVTVPEDTSPGTQVLAVFATSKDIGTNAEITYLIRSGNEQGKFKINPKTGGISVSEVLD
YELCKRFYLVVEAKDGGTPALSAVATVNINLT
DVNDNPPKFSQDVYSAVISEDALVGDSV
ILLIAEDVDSQPNGQIHFSIVNGDRDNEFTVDPVLGLVKVKKKLDRERVSGYSLLVQAVD
SGIPAMSSTATVNIDIS
DVNDNSPVFTPANYTAVIQENKPVGTSILQLVVTDRDSFHNGP
PFSFSILSGNEEEEFVLDPHGILRSAVVFQHTESLEYVLCVQAKDSGKPQQVSHTYIRVR
VI
EESTHKPTAIPLEIFIVTMEDDFPGGVIGKIHATDQDMYDVLTFALKSEQKSLFKVNS
HDGKIIALGGLDSGKYVLNVSVSDGRFQVPIDVVVHVEQLVHEMLQNTVTIRFENVSPED
FVGLHMHGFRRTLRNAVLTQKQDSLRIISIQPVAGTNQLDMLFAVEMHSSEFYKPAYLIQ
KLSNARRHLENIMRISAILEKNCSGLDCQEQHCEQGLSLDSHALMTYSTARISFVCPRFY
RNVRCTCNGGLCPGSNDPCVEKPCPGDMQCVSYEASRRPFLCQCPPGKLGECSGHTSLSF
AGNSYIKYRLSENSKEEDFKLALRLRTLQSNGIIMYTRANPCIILKIVDGKLWFQLDCGS
GPGILGISGRAVNDGSWHSVFLELNRNFTSLSLDDSYVERRRAPLYFQTLSTESSIYFGA
LVQADNIRSLTDTRVTQVLSGFQGCLDSVILNNN
ELPLQNKRSSFAEVVGLTELKLGCVL
YPDACKRSPCQHGGSCTGLPSGGYQCTCLSQFTGRNCESEITACFPNPCRNGGSCDPIGN
TFICNCKAGLTGVTCEEDINECEREECENGGSCVNVFGSFLCNCTPGYVGQYCGLRPVVV
PNIQAGHSYVGKEELIGIAVVLFVIFILVVLFIVFRKKVFRKNYSRNNITLVQDPATAAL
LNKSNGIPFRNLRGSGDGRNVYQEVGPPQVPVRPMAYTPCFQSDSRSNLDKIVDGLGGEH
QEMTTFHPESPRILTARRGVVVCSVAPNLPAVSPCRSDCDSIRKNGWDAGTENKGVDDPG
EVTCFAGSNKGSNSEVQSLSSFQSDSGDDNAYHWDTSDWMPGARLSDIEEVPNYENQDGG
SAHQGSTRELESDYYLGGYDIDSEYPPPHEEEFLSQDQLPPPLPEDFPDQYEALPPSQPV
SLASTLSPDCRRRPQFHPSQYLPPHPFPNETDLVGPPASCEFSTFAVSMNQGTEPTGPAD
SVSLSLHNSRGTSSSDVSANCGFDDSEVAMSDYESVGELSLASLHIPFVETQHQTQV
Sequence length 4557
Interactions View interactions
Associated diseases
Causal
Disease name Disease term dbSNP ID References
Esophagus neoplasm Squamous cell carcinoma of esophagus rs28934578, rs121918714, rs1567556006, rs1575166666 25151357
Schizophrenia Schizophrenia rs74315508, rs74315509, rs13447324, rs1558507406, rs387906932, rs387906933, rs863223354, rs863223355, rs776061422, rs863223349, rs748809996, rs759748655, rs863223353, rs863223350, rs863223356, rs781821239, rs863223348, rs863223346, rs863223347, rs863223351, rs863223352, rs61734270, rs797045205, rs869312829, rs869312830, rs770913157, rs869312832, rs869312831, rs781720548, rs1262969313 31374203

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