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VASN (vasorin)

Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
114990
Gene nameGene Name - the full gene name approved by the HGNC.
Vasorin
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
VASN
SynonymsGene synonyms aliases
SLITL2
ChromosomeChromosome number
16
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
16p13.3
miRNAmiRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT018355 hsa-miR-335-5p Microarray 18185580
MIRT019949 hsa-miR-375 Microarray 20215506
MIRT022816 hsa-miR-124-3p Microarray 18668037
MIRT031814 hsa-miR-16-5p Proteomics 18668040
MIRT714521 hsa-miR-22-3p HITS-CLIP 19536157
Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0005515 Function Protein binding IPI 25416956, 32296183
GO:0005615 Component Extracellular space IBA 21873635
GO:0005615 Component Extracellular space IDA 15247411, 21170088
GO:0005739 Component Mitochondrion IEA
GO:0005765 Component Lysosomal membrane HDA 17897319
Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM
HGNC
e!Ensembl
Protein
UniProt ID Q6EMK4
Protein name Vasorin (Protein slit-like 2)
Protein function May act as an inhibitor of TGF-beta signaling.
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF13855 LRR_8
56 112
Leucine rich repeat
Repeat
PF13855 LRR_8
100 160
Leucine rich repeat
Repeat
PF13855 LRR_8
192 250
Leucine rich repeat
Repeat
PF00008 EGF
409 440
EGF-like domain
Domain
Sequence
MCSRVPLLLPLLLLLALGPGVQGCPSGCQCSQPQTVFCTARQGTTVPRDVPPDTVGLYVF
ENGITMLDAGSFAGLPGLQLLDLSQNQIASLPSGVFQPL
ANLSNLDLTANRLHEITNETF
RGLRRLERLYLGKNRIRHIQPGAFDTLDRLLELKLQDNEL
RALPPLRLPRLLLLDLSHNS
LLALEPGILDTANVEALRLAGLGLQQLDEGLFSRLRNLHDLDVSDNQLERVPPVIRGLRG
LTRLRLAGNT
RIAQLRPEDLAGLAALQELDVSNLSLQALPGDLSGLFPRLRLLAAARNPF
NCVCPLSWFGPWVRESHVTLASPEETRCHFPPKNAGRLLLELDYADFGCPATTTTATVPT
TRPVVREPTALSSSLAPTWLSPTEPATEAPSPPSTAPPTVGPVPQPQDCPPSTCLNGGTC
HLGTRHHLACLCPEGFTGLY
CESQMGQGTRPSPTPVTPRPPRSLTLGIEPVSPTSLRVGL
QRYLQGSSVQLRSLRLTYRNLSGPDKRLVTLRLPASLAEYTVTQLRPNATYSVCVMPLGP
GRVPEGEEACGEAHTPPAVHSNHAPVTQAREGNLPLLIAPALAAVLLAALAAVGAAYCVR
RGRAMAAAAQDKGQVGPGAGPLELEGVKVPLEPGPKATEGGGEALPSGSECEVPLMGFPG
PGLQSPLHAKPYI
Sequence length 673
Interactions View interactions
Associated diseases
Unknown
Disease name Disease term dbSNP ID References
Liver carcinoma Liver carcinoma 25826090

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