PHTF1 (putative homeodomain transcription factor 1)

Gene

• Entrez ID: 10745
• Gene name: Putative homeodomain transcription factor 1
• Gene symbol: PHTF1
• Synonyms: PHTF
• Chromosome: 1
• Chromosome location: 1p13.2

miRNA

miRTarBase ID	miRNA	Experiments	Reference
MIRT024866	hsa-miR-215-5p	Microarray	19074876
MIRT026618	hsa-miR-192-5p	Microarray	19074876
MIRT030876	hsa-miR-21-5p	Microarray	18591254
MIRT050325	hsa-miR-25-3p	CLASH	23622248
MIRT042377	hsa-miR-484	CLASH	23622248
MIRT040056	hsa-miR-615-3p	CLASH	23622248
MIRT1232449	hsa-miR-101	CLIP-seq
MIRT1232450	hsa-miR-1278	CLIP-seq
MIRT1232451	hsa-miR-128	CLIP-seq
MIRT1232452	hsa-miR-27a	CLIP-seq
MIRT1232453	hsa-miR-27b	CLIP-seq
MIRT1232454	hsa-miR-3123	CLIP-seq
MIRT1232455	hsa-miR-3646	CLIP-seq
MIRT1232456	hsa-miR-3925-5p	CLIP-seq
MIRT1232457	hsa-miR-3976	CLIP-seq
MIRT1232458	hsa-miR-4724-5p	CLIP-seq
MIRT1232459	hsa-miR-4753-3p	CLIP-seq
MIRT1232460	hsa-miR-539	CLIP-seq
MIRT1232449	hsa-miR-101	CLIP-seq
MIRT2593168	hsa-miR-1207-3p	CLIP-seq
MIRT1232450	hsa-miR-1278	CLIP-seq
MIRT1232451	hsa-miR-128	CLIP-seq
MIRT2593169	hsa-miR-140-3p	CLIP-seq
MIRT1232452	hsa-miR-27a	CLIP-seq
MIRT1232453	hsa-miR-27b	CLIP-seq
MIRT2593170	hsa-miR-3152-3p	CLIP-seq
MIRT2593171	hsa-miR-3647-3p	CLIP-seq
MIRT2593172	hsa-miR-4422	CLIP-seq
MIRT1232458	hsa-miR-4724-5p	CLIP-seq
MIRT2593173	hsa-miR-511	CLIP-seq
MIRT2593174	hsa-miR-520d-5p	CLIP-seq
MIRT2593175	hsa-miR-524-5p	CLIP-seq
MIRT2593176	hsa-miR-552	CLIP-seq
MIRT2593177	hsa-miR-599	CLIP-seq
MIRT2593178	hsa-miR-664	CLIP-seq
MIRT1232449	hsa-miR-101	CLIP-seq
MIRT2593168	hsa-miR-1207-3p	CLIP-seq
MIRT1232450	hsa-miR-1278	CLIP-seq
MIRT1232451	hsa-miR-128	CLIP-seq
MIRT2593169	hsa-miR-140-3p	CLIP-seq
MIRT1232452	hsa-miR-27a	CLIP-seq
MIRT1232453	hsa-miR-27b	CLIP-seq
MIRT2593170	hsa-miR-3152-3p	CLIP-seq
MIRT2593171	hsa-miR-3647-3p	CLIP-seq
MIRT2593172	hsa-miR-4422	CLIP-seq
MIRT1232458	hsa-miR-4724-5p	CLIP-seq
MIRT2593173	hsa-miR-511	CLIP-seq
MIRT2593174	hsa-miR-520d-5p	CLIP-seq
MIRT2593175	hsa-miR-524-5p	CLIP-seq
MIRT2593176	hsa-miR-552	CLIP-seq
MIRT2593177	hsa-miR-599	CLIP-seq
MIRT2593178	hsa-miR-664	CLIP-seq

Gene ontology (GO)

GO ID	Ontology	Definition	Evidence	Reference
GO:0005789	Component	Endoplasmic reticulum membrane	IEA
GO:0005801	Component	Cis-Golgi network	IEA
GO:0016021	Component	Integral component of membrane	IEA

Other IDs

• MIM: 604950
• HGNC: 8939
• e!Ensembl: ENSG00000116793

Protein

• UniProt ID: Q9UMS5
• Protein name: Protein PHTF1
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF12129	Phtf-FEM1B_bdg	5 → 151	Male germ-cell putative homeodomain transcription factor	Domain

• Sequence:

  MASNERDAISWYQKKIGAYDQQIWEKSIEQTQIKGLKNKPKKMGHIKPDLIDVDLIRGST
  FAKAKPEIPWTSLTRKGLVRVVFFPLFSNWWIQVTSLRIFVWLLLLYFMQVIAIVLYLMM
  PIVNISEVLGPLCLMLLMGTVHCQIVSTQITRPSGNNGNRRRRKLRKTVNGDGSRENGNN
  SSDKVRGIETLESVPIIGGFWETIFGNRIKRVKLISNKGTETDNDPSCVHPIIKRRQCRP
  EIRMWQTREKAKFSDGEKCRREAFRRLGNGVSDDLSSEEDGEARTQMILLRRSVEGASSD
  NGCEVKNRKSILSRHLNSQVKKTTTRWCHIVRDSDSLAESEFESAAFSQGSRSGVSGGSR
  SLNMSRRDSESTRHDSETEDMLWDDLLHGPECRSSVTSDSEGAHVNTLHSGTKRDPKEDV
  FQQNHLFWLQNSSPSSDRVSAIIWEGNECKKMDMSVLEISGIIMSRVNAYQQGVGYQMLG
  NVVTIGLAFFPFLHRLFREKSLDQLKSISAEEILTLFCGAPPVTPIIVLSIINFFERLCL
  TWMFFFMMCVAERTYKQRFLFAKLFSHITSARKARKYEIPHFRLKKVENIKIWLSLRSYL
  KRRGPQRSVDVVVSSVFLLTLSIAFICCAQVLQGHKTFLNDAYNWEFLIWETALLLFLLR
  LASLGSETNKKYSNVSILLTEQINLYLKMEKKPNKKEQLTLVNNVLKLSTKLLKELDTPF
  RLYGLTMNPLIYNITRVVILSAVSGVISDLLGFNIRLWKIKS

• Sequence length: 762

Associated diseases

Causal
Disease name	Disease term	dbSNP ID	References
Rheumatoid arthritis	Rheumatoid Arthritis	rs3766379, rs3792876, rs2071592, rs3087456, rs587776843, rs1566328963, rs2240340, rs1557787212	19503088