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SPON2 (spondin 2)

Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
10417
Gene nameGene Name - the full gene name approved by the HGNC.
Spondin 2
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
SPON2
SynonymsGene synonyms aliases
DIL-1, DIL1, M-SPONDIN, MINDIN
ChromosomeChromosome number
4
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
4p16.3
miRNAmiRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT021428 hsa-miR-9-5p Microarray 17612493
MIRT755466 hsa-miR-328-5p Luciferase reporter assay, Western blotting, qRT-PCR, Immunoprecipitaion (IP), In situ hybridization 36153414
MIRT1385173 hsa-let-7a CLIP-seq
MIRT1385174 hsa-let-7b CLIP-seq
MIRT1385175 hsa-let-7c CLIP-seq
Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0005515 Function Protein binding IPI 25416956, 32296183, 32814053
GO:0007155 Process Cell adhesion IBA 21873635
GO:0031012 Component Extracellular matrix IBA 21873635
GO:0045087 Process Innate immune response IEA
GO:0046872 Function Metal ion binding IEA
Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM
HGNC
e!Ensembl
Protein
UniProt ID Q9BUD6
Protein name Spondin-2 (Differentially expressed in cancerous and non-cancerous lung cells 1) (DIL-1) (Mindin)
Protein function Cell adhesion protein that promotes adhesion and outgrowth of hippocampal embryonic neurons. Binds directly to bacteria and their components and functions as an opsonin for macrophage phagocytosis of bacteria. Essential in the initiation of the
PDB 3D34
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF06468 Spond_N
41 235
Spondin_N
Domain
PF19028 TSP1_spondin
278 330
Spondin-like TSP1 domain
Domain
Sequence
Sequence length 331
Interactions View interactions
PathwaysPathway information has different metabolic/signaling pathways associated with genes. Each record is hyperlinked to a complete information page which also includes links to the KEGG/Reactome pathway database.
 
Reactome
    Defective B3GALTL causes Peters-plus syndrome (PpS)
O-glycosylation of TSR domain-containing proteins
Associated diseases
Causal
Disease name Disease term dbSNP ID References
Prostate cancer Malignant neoplasm of prostate rs121909139, rs121909140, rs121909141, rs121909142, rs121909143, rs606231169, rs606231170, rs137852584, rs137852578, rs137852580, rs137852581, rs137852582 19208208
Unknown
Disease name Disease term dbSNP ID References
Prostatic neoplasms Prostatic Neoplasms 19208208

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