GediPNet logo

TOM1L1 (target of myb1 like 1 membrane trafficking protein)

Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
10040
Gene nameGene Name - the full gene name approved by the HGNC.
Target of myb1 like 1 membrane trafficking protein
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
TOM1L1
SynonymsGene synonyms aliases
SRCASM
ChromosomeChromosome number
17
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
17q22
miRNAmiRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT002599 hsa-miR-124-3p Microarray 15685193
MIRT002599 hsa-miR-124-3p Microarray;Other 15685193
MIRT049735 hsa-miR-92a-3p CLASH 23622248
MIRT1446253 hsa-miR-130a CLIP-seq
MIRT1446254 hsa-miR-130b CLIP-seq
Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0005515 Function Protein binding IPI 15611048, 16412388, 18654987, 19798056, 20936779, 21903422, 21988832
GO:0005737 Component Cytoplasm IDA 16412388
GO:0005764 Component Lysosome TAS 10329004
GO:0005768 Component Endosome IBA 21873635
GO:0005768 Component Endosome IDA 15611048, 16412388
Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM
HGNC
e!Ensembl
Protein
UniProt ID O75674
Protein name TOM1-like protein 1 (Src-activating and signaling molecule protein) (Target of Myb-like protein 1)
Protein function Probable adapter protein involved in signaling pathways. Interacts with the SH2 and SH3 domains of various signaling proteins when it is phosphorylated. May promote FYN activation, possibly by disrupting intramolecular SH3-dependent interactions
PDB 3RRU
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00790 VHS
9 150
VHS domain
Domain
PF03127 GAT
213 289
GAT domain
Domain
Sequence
MAFGKSHRDPYATSVGHLIEKATFAGVQTEDWGQFMHICDIINTTQDGPKDAVKALKKRI
SKNYNHKEIQLTLSLIDMCVQNCGPSFQSLIVKKEFVKENLVKLLNPRYNLPLDIQNRIL
NFIKTWSQGFPGGVDVSEVKEVYLDLVKKG
VQFPPSEAEAETARQETAQISSNPPTSVPT
APALSSVIAPKNSTVTLVPEQIGKLHSELDMVKMNVRVMSAILMENTPGSENHEDIELLQ
KLYKTGREMQERIMDLLVVVENEDVTVELIQVNEDLNNAILGYERFTRN
QQRILEQNKNQ
KEATNTTSEPSAPSQDLLDLSPSPRMPRATLGELNTMNNQLSGLNFSLPSSDVTNNLKPS
LHPQMNLLALENTEIPPFAQRTSQNLTSSHAYDNFLEHSNSVFLQPVSLQTIAAAPSNQS
LPPLPSNHPAMTKSDLQPPNYYEVMEFDPLAPAVTTEAIYEEIDAHQHKGAQNDGD
Sequence length 476
Interactions View interactions
Associated diseases
Causal
Disease name Disease term dbSNP ID References
Prostate cancer Malignant neoplasm of prostate rs121909139, rs121909140, rs121909141, rs121909142, rs121909143, rs606231169, rs606231170, rs137852584, rs137852578, rs137852580, rs137852581, rs137852582 17013881
Unknown
Disease name Disease term dbSNP ID References
Prostatic neoplasms Prostatic Neoplasms 17013881

| © 2021, Biomedical Informatics Centre, NIRRH |
ICMR-National Institute for Research in Reproductive Health, Jehangir Merwanji Street, Parel, Mumbai-400012
Tel: +91-22-24192104, Fax No: +91-22-24139412