# GeDiPNet Shared-Gene Disease Pairs -- generated 2026-10-10 21:38:21
# Similarity: Jaccard index on shared curated genes (disease_gdp). Significance: upper-tail hypergeometric test (P(X>=k)), Benjamini-Hochberg FDR-corrected across all tested pairs. Corroborated Shared Genes: count of shared genes backed by >=2 distinct disease_gdp.main_source values combined across both diseases (e.g. GWAS-backed for one, ClinVar-backed for the other still counts); Shared Gene Names lists each gene's own source count in parentheses. Overlap Coefficient: shared genes / MIN(each disease's own total gene count) -- complements the Jaccard-based Similarity Score by showing how much of the SMALLER disease's entire known gene-set is covered by this pair, which Jaccard (dividing by the union) can understate. Shared Cluster: cluster id if both diseases fall in the same label-propagation cluster (scripts/build_disease_clusters.php), blank otherwise. See scripts/build_related.php on gedipnet.bicnirrh.res.in. Data as of: 2026-10-11 03:00:14. Filters applied: disease name contains "Cyclic hematopoiesis" (5 matching pairs).
Disease A	Disease B	Shared Genes	Corroborated Shared Genes	Shared Gene Names	Similarity Score	Overlap Coefficient	P-value	FDR Q-value	Shared Cluster
Cyclic hematopoiesis	Neutropenia	1	1	ELANE (4)	0.01724	1.00000	3.702e-3	4.735e-3	
Autoinflammatory syndrome	Cyclic hematopoiesis	1	1	ELANE (2)	0.02632	1.00000	2.403e-3	3.313e-3	
Cyclic hematopoiesis	Severe congenital neutropenia	1	1	ELANE (7)	0.04348	1.00000	1.429e-3	2.226e-3	
Congenital neutropenia	Cyclic hematopoiesis	1	1	ELANE (2)	0.05556	1.00000	1.104e-3	1.826e-3	
Cyclic hematopoiesis	Cyclic neutropenia	1	1	ELANE (6)	0.33333	1.00000	1.299e-4	3.931e-4