UBB (ubiquitin B)

Gene
Gene SNPs Transcription factors Other IDs
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
7314
Gene name Gene Name - the full gene name approved by the HGNC.
Ubiquitin B
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
UBB
Synonyms (NCBI Gene) Gene synonyms aliases
HEL-S-50
Chromosome Chromosome number
17
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
17p11.2
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes ubiquitin, one of the most conserved proteins known. Ubiquitin has a major role in targeting cellular proteins for degradation by the 26S proteosome. It is also involved in the maintenance of chromatin structure, the regulation of gene e
miRNA miRNA information provided by mirtarbase database.
Gene SNPs Transcription factors Other IDs
Show/Hide all(376)
miRTarBase ID miRNA Experiments Reference
MIRT029681 hsa-miR-26b-5p Microarray 19088304
MIRT048633 hsa-miR-99a-5p CLASH 23622248
MIRT048512 hsa-miR-100-5p CLASH 23622248
MIRT047262 hsa-miR-181b-5p CLASH 23622248
MIRT040746 hsa-miR-18a-3p CLASH 23622248
Transcription factors
Gene SNPs Transcription factors Other IDs
Show/Hide all(1)
Transcription factor Regulation Reference
HSF1 Unknown 20692357
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
Gene SNPs Transcription factors Other IDs
Show/Hide all(43)
GO ID Ontology Definition Evidence Reference
GO:0005515 Function Protein binding IPI 14755250, 14764729, 15039775, 15143060, 15308666, 16189514, 16286470, 16499958, 17310990, 17662948, 17719543, 18029035, 18313049, 20924359, 21516116, 24981860, 28514442, 32296183, 32814053, 33961781
GO:0005615 Component Extracellular space HDA 16502470
GO:0005634 Component Nucleus HDA 21630459
GO:0005634 Component Nucleus IBA
GO:0005634 Component Nucleus IEA
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
Gene SNPs Transcription factors Other IDs
MIM HGNC e!Ensembl
191339 12463 ENSG00000170315
Protein
Gene SNPs Transcription factors Other IDs
UniProt ID P0CG47
Protein name Polyubiquitin-B [Cleaved into: Ubiquitin]
Protein function [Ubiquitin]: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys re
PDB 2KHW , 2MBB , 2MRO , 2MSG , 2N13 , 4UEL , 4UF6 , 4WHV , 4WLR , 4WUR , 4XOF , 4ZFR , 4ZFT , 4ZPZ , 4ZUX , 5BNB , 5CAW , 5CRA , 5CVM , 5CVN , 5CVO , 5D0K , 5D0M , 5DFL , 5DK8 , 5E6J , 5EDV , 5EMZ , 5EYA , 5GJQ , 5GO7 , 5GO8 , 5GOB , 5GOC , 5GOD , 5GOG , 5GOH , 5GOI , 5GOJ , 5GOK , 5H7S , 5IBK , 5IFR , 5JBY , 5JG6 , 5JP3 , 5JTJ , 5JTV , 5K9P , 5KGF , 5KHY
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00240 ubiquitin 3 → 74 Ubiquitin family Domain
PF00240 ubiquitin 79 → 150 Ubiquitin family Domain
PF00240 ubiquitin 155 → 226 Ubiquitin family Domain
Sequence
Sequence length 229
Interactions View interactions
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