Gene Gene information from NCBI Gene database.
Entrez ID 7186
Gene name TNF receptor associated factor 2
Gene symbol TRAF2
Synonyms (NCBI Gene)
MGC:45012RNF117TRAPTRAP3
Chromosome 9
Chromosome location 9q34.3
Summary The protein encoded by this gene is a member of the TNF receptor associated factor (TRAF) protein family. TRAF proteins associate with, and mediate the signal transduction from members of the TNF receptor superfamily. This protein directly interacts with
miRNA miRNA information provided by mirtarbase database.
122
miRTarBase ID miRNA Experiments Reference
MIRT437984 hsa-miR-502-5p qRT-PCRLuciferase reporter assayWestern blot 24677135
MIRT437984 hsa-miR-502-5p qRT-PCRLuciferase reporter assayWestern blot 24677135
MIRT437984 hsa-miR-502-5p qRT-PCRLuciferase reporter assayWestern blot 24677135
MIRT437984 hsa-miR-502-5p qRT-PCRLuciferase reporter assayWestern blot 24677135
MIRT437984 hsa-miR-502-5p qRT-PCRLuciferase reporter assayWestern blot 24677135
Transcription factors Transcription factors information provided by TRRUST V2 database.
6
Transcription factor Regulation Reference
NFKB1 Activation 15041463
NFKB1 Repression 15723831
NFKB1 Unknown 19392652
RELA Activation 15041463
RELA Repression 15723831
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
117
GO ID Ontology Definition Evidence Reference
GO:0000151 Component Ubiquitin ligase complex IPI 17314283
GO:0002637 Process Regulation of immunoglobulin production IEA
GO:0002700 Process Regulation of production of molecular mediator of immune response IEA
GO:0002726 Process Positive regulation of T cell cytokine production IMP 15125833
GO:0002947 Component Tumor necrosis factor receptor superfamily complex IDA 23429285
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
601895 12032 ENSG00000127191
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q12933
Protein name TNF receptor-associated factor 2 (EC 2.3.2.27) (E3 ubiquitin-protein ligase TRAF2) (RING-type E3 ubiquitin transferase TRAF2) (Tumor necrosis factor type 2 receptor-associated protein 3)
Protein function E3 ubiquitin-protein ligase that regulates activation of NF-kappa-B and JNK and plays a central role in the regulation of cell survival and apoptosis (PubMed:10346818, PubMed:11784851, PubMed:12917689, PubMed:15383523, PubMed:18981220, PubMed:19
PDB 1CA4 , 1CA9 , 1CZY , 1CZZ , 1D00 , 1D01 , 1D0A , 1D0J , 1F3V , 1QSC , 3KNV , 3M06 , 3M0A , 3M0D , 8T5Q
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00097 zf-C3HC4 34 72 Zinc finger, C3HC4 type (RING finger) Domain
PF02176 zf-TRAF 178 235 TRAF-type zinc finger Family
PF16673 TRAF_BIRC3_bd 267 330 TNF receptor-associated factor BIRC3 binding domain Coiled-coil
Sequence
MAAASVTPPGSLELLQPGFSKTLLGTKLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLAS
ILSSGPQNCAAC
VHEGIYEEGISILESSSAFPDNAARREVESLPAVCPSDGCTWKGTLKE
YESCHEGRCPLMLTECPACKGLVRLGEKERHLEHECPERSLSCRHCRAPCCGADVKAHHE
VCPKFPLTCDGCGKKKIPREKFQDHVKTCGKCRVPCRFHAIGCLETVEGEKQQEH
EVQWL
REHLAMLLSSVLEAKPLLGDQSHAGSELLQRCESLEKKTATFENIVCVLNREVERVAMTA
EACSRQHRLDQDKIEALSSKVQQLERSIGL
KDLAMADLEQKVLEMEASTYDGVFIWKISD
FARKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDA
LLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVNDMNIASGCPLFCPVSKMEA
KNSYVRDDAIFIKAIVDLTGL
Sequence length 501
Interactions View interactions
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
11
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Acute myeloid leukemia Benign rs148192660 RCV005906122
Familial cancer of breast Likely benign; Benign rs201857326, rs148192660 RCV005926856
RCV005906121
Gastric cancer Benign rs148192660 RCV005906125
Hepatocellular carcinoma Benign rs148192660 RCV005906123
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
Alopecia Areata Associate 20546884
Altitude Sickness Associate 35668171
Arthritis Rheumatoid Stimulate 16951485
Arthritis Rheumatoid Associate 27534557, 32145086, 33483588
Atrial Fibrillation Associate 26774166
Breast Neoplasms Associate 26317411
Carcinoma Hepatocellular Associate 28521610, 35855852, 37081115
Carcinoma Non Small Cell Lung Associate 23188828
Carcinoma Ovarian Epithelial Associate 24740199, 34071938
Carcinoma Pancreatic Ductal Associate 23301098