Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
6233
Gene name Gene Name - the full gene name approved by the HGNC.
Ribosomal protein S27a
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
RPS27A
Synonyms (NCBI Gene) Gene synonyms aliases
CEP80, HEL112, S27A, UBA80, UBC, UBCEP1, UBCEP80, eS31
Chromosome Chromosome number
2
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
2p16.1
Summary Summary of gene provided in NCBI Entrez Gene.
Ubiquitin, a highly conserved protein that has a major role in targeting cellular proteins for degradation by the 26S proteosome, is synthesized as a precursor protein consisting of either polyubiquitin chains or a single ubiquitin fused to an unrelated p
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT050798 hsa-miR-17-5p CLASH 23622248
MIRT050094 hsa-miR-26a-5p CLASH 23622248
MIRT047980 hsa-miR-30c-5p CLASH 23622248
MIRT046242 hsa-miR-23b-3p CLASH 23622248
MIRT046153 hsa-miR-30b-5p CLASH 23622248
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000122 Process Negative regulation of transcription by RNA polymerase II TAS
GO:0000184 Process Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay TAS
GO:0000187 Process Activation of MAPK activity TAS
GO:0000209 Process Protein polyubiquitination TAS
GO:0000715 Process Nucleotide-excision repair, DNA damage recognition TAS
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
191343 10417 ENSG00000143947
Protein
UniProt ID P62979
Protein name Ubiquitin-ribosomal protein eS31 fusion protein (Ubiquitin carboxyl extension protein 80) [Cleaved into: Ubiquitin; Small ribosomal subunit protein eS31 (40S ribosomal protein S27a)]
Protein function [Ubiquitin]: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys re
PDB 2KHW , 2KOX , 2KTF , 2KWU , 2KWV , 2L0F , 2L0T , 2XK5 , 3AXC , 3I3T , 3K9P , 3N30 , 3N32 , 3NHE , 3NOB , 3NS8 , 3PHD , 3PHW , 3TBL , 3VDZ , 4R62 , 4UG0 , 4V6X , 5A2Q , 5AJ0 , 5FLX , 5LKS , 5T2C , 5WVO , 5YDK , 6DC6 , 6FEC , 6G18 , 6G51 , 6G53 , 6G5H , 6G5I , 6IP5 , 6IP6 , 6IP8 , 6J99 , 6KFP , 6KG6 , 6KIU , 6KIV , 6KIW , 6OLE , 6OLF , 6OLG , 6OLI , 6OLZ
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00240 ubiquitin 3 74 Ubiquitin family Domain
PF01599 Ribosomal_S27 102 147 Ribosomal protein S27a Domain
Sequence
Sequence length 156
Interactions View interactions