Gene Gene information from NCBI Gene database.
Entrez ID 5906
Gene name RAP1A, member of RAS oncogene family
Gene symbol RAP1A
Synonyms (NCBI Gene)
C21KGG-22KKREV-1KREV1RAP1SMGP21
Chromosome 1
Chromosome location 1p13.2
Summary This gene encodes a member of the Ras family of small GTPases. The encoded protein undergoes a change in conformational state and activity, depending on whether it is bound to GTP or GDP. This protein is activated by several types of guanine nucleotide ex
miRNA miRNA information provided by mirtarbase database.
318
miRTarBase ID miRNA Experiments Reference
MIRT006958 hsa-miR-337-3p Luciferase reporter assayqRT-PCRWestern blot 22723956
MIRT051421 hsa-let-7e-5p CLASH 23622248
MIRT554948 hsa-miR-19b-3p PAR-CLIP 21572407
MIRT554947 hsa-miR-19a-3p PAR-CLIP 21572407
MIRT554946 hsa-miR-10a-3p PAR-CLIP 21572407
Transcription factors Transcription factors information provided by TRRUST V2 database.
2
Transcription factor Regulation Reference
TWIST1 Repression 19051271
TWIST2 Repression 19051271
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
82
GO ID Ontology Definition Evidence Reference
GO:0000166 Function Nucleotide binding IEA
GO:0003924 Function GTPase activity IBA
GO:0003924 Function GTPase activity IEA
GO:0003924 Function GTPase activity TAS 10777492
GO:0003925 Function G protein activity IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
179520 9855 ENSG00000116473
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P62834
Protein name Ras-related protein Rap-1A (EC 3.6.5.2) (C21KG) (G-22K) (GTP-binding protein smg p21A) (Ras-related protein Krev-1)
Protein function Counteracts the mitogenic function of Ras, at least partly because it can interact with Ras GAPs and RAF in a competitive manner. Together with ITGB1BP1, regulates KRIT1 localization to microtubules and membranes (PubMed:17916086). Plays a role
PDB 1C1Y , 1GUA , 3KUC , 4KVG
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00071 Ras 5 167 Ras family Domain
Sequence
Sequence length 184
Interactions View interactions
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
9
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Acute myeloid leukemia Likely benign rs748245059 RCV005905103
Cervical cancer Likely benign rs748245059 RCV005905105
Gastric cancer Likely benign rs748245059 RCV005905106
Hepatocellular carcinoma Benign rs3738300 RCV005921494
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
Acute Disease Associate 35114361
Adenocarcinoma of Lung Associate 34039311, 37919693
Adenocarcinoma of Lung Inhibit 34446056
Adenoma Associate 30183087
Alzheimer Disease Associate 35011725, 37999404
Arthritis Rheumatoid Inhibit 17009234
Blood Platelet Disorders Associate 23243278, 27235135
Breast Neoplasms Associate 23405264, 33267867, 35197309, 37561760
Cap Myopathy Associate 19470770
Carcinogenesis Associate 19470770, 23219753, 24316969, 25856570