Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene information from NCBI Gene database. Gene SNPs Other IDs Associated diseases
Entrez ID	5792
Gene name	Protein tyrosine phosphatase receptor type F
Gene symbol	PTPRF
Synonyms (NCBI Gene)	BNAH2LAR
Chromosome	1
Chromosome location	1p34.2
Summary	The protein encoded by this gene is a member of the protein tyrosine phosphatase (PTP) family. PTPs are known to be signaling molecules that regulate a variety of cellular processes including cell growth, differentiation, mitotic cycle, and oncogenic tran

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SNP ID	Visualize variation	Clinical significance	Consequence
rs1131692054	TG>-	Pathogenic	Intron variant, coding sequence variant, frameshift variant

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miRTarBase ID	miRNA	Experiments	Reference
MIRT001340	hsa-miR-1-3p	pSILAC	18668040
MIRT001340	hsa-miR-1-3p	Proteomics;Other	18668040
MIRT035527	hsa-miR-24-3p	Luciferase reporter assay	23418360
MIRT035527	hsa-miR-24-3p	Luciferase reporter assay	23418360
MIRT046964	hsa-miR-221-3p	CLASH	23622248
MIRT038659	hsa-miR-15b-3p	CLASH	23622248
MIRT037821	hsa-miR-455-3p	CLASH	23622248
MIRT037603	hsa-miR-744-5p	CLASH	23622248
MIRT036277	hsa-miR-1229-3p	CLASH	23622248
MIRT035797	hsa-miR-1914-5p	CLASH	23622248
MIRT052751	hsa-miR-1260b	CLASH	23622248
MIRT717394	hsa-miR-646	HITS-CLIP	19536157
MIRT469952	hsa-miR-6858-3p	HITS-CLIP	19536157
MIRT717393	hsa-miR-4691-3p	HITS-CLIP	19536157
MIRT717392	hsa-miR-6736-3p	HITS-CLIP	19536157
MIRT717391	hsa-miR-4530	HITS-CLIP	19536157
MIRT717390	hsa-miR-6803-3p	HITS-CLIP	19536157
MIRT717388	hsa-miR-4655-3p	HITS-CLIP	19536157
MIRT717389	hsa-miR-4469	HITS-CLIP	19536157
MIRT717387	hsa-miR-4660	HITS-CLIP	19536157
MIRT717386	hsa-miR-7106-3p	HITS-CLIP	19536157
MIRT717385	hsa-miR-3157-5p	HITS-CLIP	19536157
MIRT717384	hsa-miR-425-3p	HITS-CLIP	19536157
MIRT469970	hsa-miR-302f	HITS-CLIP	23313552
MIRT469966	hsa-miR-4532	HITS-CLIP	23313552
MIRT469965	hsa-miR-219b-3p	HITS-CLIP	23313552
MIRT469964	hsa-miR-4537	HITS-CLIP	23313552
MIRT469963	hsa-miR-377-5p	HITS-CLIP	23313552
MIRT469962	hsa-miR-6086	HITS-CLIP	23313552
MIRT469960	hsa-miR-2467-3p	HITS-CLIP	23313552
MIRT469959	hsa-miR-6499-3p	HITS-CLIP	23313552
MIRT469958	hsa-miR-486-3p	HITS-CLIP	23313552
MIRT469957	hsa-miR-328-5p	HITS-CLIP	23313552
MIRT469956	hsa-miR-6885-5p	HITS-CLIP	23313552
MIRT037821	hsa-miR-455-3p	HITS-CLIP	23313552
MIRT469955	hsa-miR-1273e	HITS-CLIP	23313552
MIRT469954	hsa-miR-6516-5p	HITS-CLIP	23313552
MIRT700493	hsa-miR-6771-3p	HITS-CLIP	23313552
MIRT700492	hsa-miR-619-3p	HITS-CLIP	23313552
MIRT700491	hsa-miR-7851-3p	HITS-CLIP	23313552
MIRT700490	hsa-miR-340-3p	HITS-CLIP	23313552
MIRT700489	hsa-miR-6827-3p	HITS-CLIP	23313552
MIRT700488	hsa-miR-939-3p	HITS-CLIP	23313552
MIRT700487	hsa-miR-4486	HITS-CLIP	23313552
MIRT700486	hsa-miR-585-3p	HITS-CLIP	23313552
MIRT700485	hsa-miR-1268a	HITS-CLIP	23313552
MIRT700484	hsa-miR-1268b	HITS-CLIP	23313552
MIRT700483	hsa-miR-4684-5p	HITS-CLIP	23313552
MIRT645719	hsa-miR-4677-3p	HITS-CLIP	23824327
MIRT645718	hsa-miR-4679	HITS-CLIP	23824327
MIRT645717	hsa-miR-2115-5p	HITS-CLIP	23824327
MIRT645716	hsa-miR-4504	HITS-CLIP	23824327
MIRT645715	hsa-miR-542-3p	HITS-CLIP	23824327
MIRT645714	hsa-let-7c-3p	HITS-CLIP	23824327
MIRT645713	hsa-let-7a-2-3p	HITS-CLIP	23824327
MIRT645712	hsa-let-7g-3p	HITS-CLIP	23824327
MIRT645711	hsa-miR-493-5p	HITS-CLIP	23824327
MIRT569285	hsa-miR-4787-5p	PAR-CLIP	20371350
MIRT569284	hsa-miR-658	PAR-CLIP	20371350
MIRT569283	hsa-miR-25-5p	PAR-CLIP	20371350
MIRT569282	hsa-miR-6752-5p	PAR-CLIP	20371350
MIRT569280	hsa-miR-6842-5p	PAR-CLIP	20371350
MIRT569281	hsa-miR-7110-5p	PAR-CLIP	20371350
MIRT569279	hsa-miR-4651	PAR-CLIP	20371350
MIRT569278	hsa-miR-608	PAR-CLIP	20371350
MIRT569277	hsa-miR-4730	PAR-CLIP	20371350
MIRT469970	hsa-miR-302f	PAR-CLIP	20371350
MIRT469967	hsa-miR-4257	PAR-CLIP	20371350
MIRT469966	hsa-miR-4532	PAR-CLIP	20371350
MIRT469965	hsa-miR-219b-3p	PAR-CLIP	20371350
MIRT469963	hsa-miR-377-5p	PAR-CLIP	20371350
MIRT469962	hsa-miR-6086	PAR-CLIP	20371350
MIRT469961	hsa-miR-298	PAR-CLIP	20371350
MIRT469960	hsa-miR-2467-3p	PAR-CLIP	20371350
MIRT469959	hsa-miR-6499-3p	PAR-CLIP	20371350
MIRT469958	hsa-miR-486-3p	PAR-CLIP	20371350
MIRT469957	hsa-miR-328-5p	PAR-CLIP	20371350
MIRT469956	hsa-miR-6885-5p	PAR-CLIP	20371350
MIRT037821	hsa-miR-455-3p	PAR-CLIP	20371350
MIRT469955	hsa-miR-1273e	PAR-CLIP	20371350
MIRT469954	hsa-miR-6516-5p	PAR-CLIP	20371350
MIRT469970	hsa-miR-302f	PAR-CLIP	21572407
MIRT469966	hsa-miR-4532	PAR-CLIP	21572407
MIRT469965	hsa-miR-219b-3p	PAR-CLIP	21572407
MIRT469961	hsa-miR-298	PAR-CLIP	21572407
MIRT469960	hsa-miR-2467-3p	PAR-CLIP	21572407
MIRT469958	hsa-miR-486-3p	PAR-CLIP	21572407
MIRT469957	hsa-miR-328-5p	PAR-CLIP	21572407
MIRT469956	hsa-miR-6885-5p	PAR-CLIP	21572407
MIRT469955	hsa-miR-1273e	PAR-CLIP	21572407
MIRT469974	hsa-miR-548an	PAR-CLIP	23592263
MIRT469973	hsa-miR-6768-3p	PAR-CLIP	23592263
MIRT469972	hsa-miR-4484	PAR-CLIP	23592263
MIRT469971	hsa-miR-3714	PAR-CLIP	23592263
MIRT469970	hsa-miR-302f	PAR-CLIP	23592263
MIRT469969	hsa-miR-1910-3p	PAR-CLIP	23592263
MIRT469968	hsa-miR-6511a-5p	PAR-CLIP	23592263
MIRT469967	hsa-miR-4257	PAR-CLIP	23592263
MIRT469966	hsa-miR-4532	PAR-CLIP	23592263
MIRT469965	hsa-miR-219b-3p	PAR-CLIP	23592263
MIRT469964	hsa-miR-4537	PAR-CLIP	23592263
MIRT469963	hsa-miR-377-5p	PAR-CLIP	23592263
MIRT469962	hsa-miR-6086	PAR-CLIP	23592263
MIRT469961	hsa-miR-298	PAR-CLIP	23592263
MIRT469960	hsa-miR-2467-3p	PAR-CLIP	23592263
MIRT469959	hsa-miR-6499-3p	PAR-CLIP	23592263
MIRT469958	hsa-miR-486-3p	PAR-CLIP	23592263
MIRT469957	hsa-miR-328-5p	PAR-CLIP	23592263
MIRT469956	hsa-miR-6885-5p	PAR-CLIP	23592263
MIRT037821	hsa-miR-455-3p	PAR-CLIP	23592263
MIRT469955	hsa-miR-1273e	PAR-CLIP	23592263
MIRT469954	hsa-miR-6516-5p	PAR-CLIP	23592263
MIRT469952	hsa-miR-6858-3p	PAR-CLIP	23592263
MIRT469953	hsa-miR-4676-5p	PAR-CLIP	23592263
MIRT469951	hsa-miR-575	PAR-CLIP	23592263
MIRT469950	hsa-miR-1296-3p	PAR-CLIP	23592263
MIRT469949	hsa-miR-4795-5p	PAR-CLIP	23592263
MIRT469948	hsa-miR-6878-5p	PAR-CLIP	23592263
MIRT469947	hsa-miR-3175	PAR-CLIP	23592263
MIRT469946	hsa-miR-625-5p	PAR-CLIP	23592263
MIRT469945	hsa-miR-4723-5p	PAR-CLIP	23592263
MIRT469944	hsa-miR-5698	PAR-CLIP	23592263
MIRT469942	hsa-miR-6870-5p	PAR-CLIP	23592263
MIRT469943	hsa-miR-7111-5p	PAR-CLIP	23592263
MIRT469941	hsa-miR-4525	PAR-CLIP	23592263
MIRT469940	hsa-miR-5010-5p	PAR-CLIP	23592263
MIRT469939	hsa-miR-3190-3p	PAR-CLIP	23592263
MIRT469938	hsa-miR-4447	PAR-CLIP	23592263
MIRT469937	hsa-miR-4472	PAR-CLIP	23592263
MIRT469936	hsa-miR-4662a-5p	PAR-CLIP	23592263
MIRT469935	hsa-miR-1275	PAR-CLIP	23592263
MIRT469934	hsa-miR-4665-5p	PAR-CLIP	23592263
MIRT469955	hsa-miR-1273e	PAR-CLIP	26701625
MIRT469955	hsa-miR-1273e	PAR-CLIP	26701625
MIRT469965	hsa-miR-219b-3p	PAR-CLIP	26701625
MIRT469965	hsa-miR-219b-3p	PAR-CLIP	26701625
MIRT469960	hsa-miR-2467-3p	PAR-CLIP	26701625
MIRT469960	hsa-miR-2467-3p	PAR-CLIP	26701625
MIRT469970	hsa-miR-302f	PAR-CLIP	26701625
MIRT469970	hsa-miR-302f	PAR-CLIP	26701625
MIRT469957	hsa-miR-328-5p	PAR-CLIP	26701625
MIRT469957	hsa-miR-328-5p	PAR-CLIP	26701625
MIRT469963	hsa-miR-377-5p	PAR-CLIP	26701625
MIRT469963	hsa-miR-377-5p	PAR-CLIP	26701625
MIRT469967	hsa-miR-4257	PAR-CLIP	26701625
MIRT469967	hsa-miR-4257	PAR-CLIP	26701625
MIRT469966	hsa-miR-4532	PAR-CLIP	26701625
MIRT469966	hsa-miR-4532	PAR-CLIP	26701625
MIRT469964	hsa-miR-4537	PAR-CLIP	26701625
MIRT469964	hsa-miR-4537	PAR-CLIP	26701625
MIRT037821	hsa-miR-455-3p	PAR-CLIP	26701625
MIRT037821	hsa-miR-455-3p	PAR-CLIP	26701625
MIRT469958	hsa-miR-486-3p	PAR-CLIP	26701625
MIRT469958	hsa-miR-486-3p	PAR-CLIP	26701625
MIRT469962	hsa-miR-6086	PAR-CLIP	26701625
MIRT469962	hsa-miR-6086	PAR-CLIP	26701625
MIRT469959	hsa-miR-6499-3p	PAR-CLIP	26701625
MIRT469959	hsa-miR-6499-3p	PAR-CLIP	26701625
MIRT469954	hsa-miR-6516-5p	PAR-CLIP	26701625
MIRT469954	hsa-miR-6516-5p	PAR-CLIP	26701625
MIRT469956	hsa-miR-6885-5p	PAR-CLIP	26701625
MIRT469956	hsa-miR-6885-5p	PAR-CLIP	26701625
MIRT717394	hsa-miR-646	HITS-CLIP	19536157
MIRT469952	hsa-miR-6858-3p	HITS-CLIP	19536157
MIRT717393	hsa-miR-4691-3p	HITS-CLIP	19536157
MIRT717392	hsa-miR-6736-3p	HITS-CLIP	19536157
MIRT717391	hsa-miR-4530	HITS-CLIP	19536157
MIRT717390	hsa-miR-6803-3p	HITS-CLIP	19536157
MIRT717388	hsa-miR-4655-3p	HITS-CLIP	19536157
MIRT717389	hsa-miR-4469	HITS-CLIP	19536157
MIRT717387	hsa-miR-4660	HITS-CLIP	19536157
MIRT717386	hsa-miR-7106-3p	HITS-CLIP	19536157
MIRT717385	hsa-miR-3157-5p	HITS-CLIP	19536157
MIRT717384	hsa-miR-425-3p	HITS-CLIP	19536157
MIRT469970	hsa-miR-302f	HITS-CLIP	23313552
MIRT469966	hsa-miR-4532	HITS-CLIP	23313552
MIRT469965	hsa-miR-219b-3p	HITS-CLIP	23313552
MIRT469964	hsa-miR-4537	HITS-CLIP	23313552
MIRT469963	hsa-miR-377-5p	HITS-CLIP	23313552
MIRT469962	hsa-miR-6086	HITS-CLIP	23313552
MIRT469960	hsa-miR-2467-3p	HITS-CLIP	23313552
MIRT469959	hsa-miR-6499-3p	HITS-CLIP	23313552
MIRT469958	hsa-miR-486-3p	HITS-CLIP	23313552
MIRT469957	hsa-miR-328-5p	HITS-CLIP	23313552
MIRT469956	hsa-miR-6885-5p	HITS-CLIP	23313552
MIRT037821	hsa-miR-455-3p	HITS-CLIP	23313552
MIRT469955	hsa-miR-1273e	HITS-CLIP	23313552
MIRT469954	hsa-miR-6516-5p	HITS-CLIP	23313552
MIRT700493	hsa-miR-6771-3p	HITS-CLIP	23313552
MIRT700492	hsa-miR-619-3p	HITS-CLIP	23313552
MIRT700491	hsa-miR-7851-3p	HITS-CLIP	23313552
MIRT700490	hsa-miR-340-3p	HITS-CLIP	23313552
MIRT700489	hsa-miR-6827-3p	HITS-CLIP	23313552
MIRT700488	hsa-miR-939-3p	HITS-CLIP	23313552
MIRT700487	hsa-miR-4486	HITS-CLIP	23313552
MIRT700486	hsa-miR-585-3p	HITS-CLIP	23313552
MIRT700485	hsa-miR-1268a	HITS-CLIP	23313552
MIRT700484	hsa-miR-1268b	HITS-CLIP	23313552
MIRT700483	hsa-miR-4684-5p	HITS-CLIP	23313552
MIRT645719	hsa-miR-4677-3p	HITS-CLIP	23824327
MIRT645718	hsa-miR-4679	HITS-CLIP	23824327
MIRT645717	hsa-miR-2115-5p	HITS-CLIP	23824327
MIRT645716	hsa-miR-4504	HITS-CLIP	23824327
MIRT645715	hsa-miR-542-3p	HITS-CLIP	23824327
MIRT645714	hsa-let-7c-3p	HITS-CLIP	23824327
MIRT645713	hsa-let-7a-2-3p	HITS-CLIP	23824327
MIRT645712	hsa-let-7g-3p	HITS-CLIP	23824327
MIRT645711	hsa-miR-493-5p	HITS-CLIP	23824327
MIRT569285	hsa-miR-4787-5p	PAR-CLIP	20371350
MIRT569284	hsa-miR-658	PAR-CLIP	20371350
MIRT569283	hsa-miR-25-5p	PAR-CLIP	20371350
MIRT569282	hsa-miR-6752-5p	PAR-CLIP	20371350
MIRT569280	hsa-miR-6842-5p	PAR-CLIP	20371350
MIRT569281	hsa-miR-7110-5p	PAR-CLIP	20371350
MIRT569279	hsa-miR-4651	PAR-CLIP	20371350
MIRT569278	hsa-miR-608	PAR-CLIP	20371350
MIRT569277	hsa-miR-4730	PAR-CLIP	20371350
MIRT469970	hsa-miR-302f	PAR-CLIP	20371350
MIRT469967	hsa-miR-4257	PAR-CLIP	20371350
MIRT469966	hsa-miR-4532	PAR-CLIP	20371350
MIRT469965	hsa-miR-219b-3p	PAR-CLIP	20371350
MIRT469963	hsa-miR-377-5p	PAR-CLIP	20371350
MIRT469962	hsa-miR-6086	PAR-CLIP	20371350
MIRT469961	hsa-miR-298	PAR-CLIP	20371350
MIRT469960	hsa-miR-2467-3p	PAR-CLIP	20371350
MIRT469959	hsa-miR-6499-3p	PAR-CLIP	20371350
MIRT469958	hsa-miR-486-3p	PAR-CLIP	20371350
MIRT469957	hsa-miR-328-5p	PAR-CLIP	20371350
MIRT469956	hsa-miR-6885-5p	PAR-CLIP	20371350
MIRT037821	hsa-miR-455-3p	PAR-CLIP	20371350
MIRT469955	hsa-miR-1273e	PAR-CLIP	20371350
MIRT469954	hsa-miR-6516-5p	PAR-CLIP	20371350
MIRT469970	hsa-miR-302f	PAR-CLIP	21572407
MIRT469966	hsa-miR-4532	PAR-CLIP	21572407
MIRT469965	hsa-miR-219b-3p	PAR-CLIP	21572407
MIRT469961	hsa-miR-298	PAR-CLIP	21572407
MIRT469960	hsa-miR-2467-3p	PAR-CLIP	21572407
MIRT469958	hsa-miR-486-3p	PAR-CLIP	21572407
MIRT469957	hsa-miR-328-5p	PAR-CLIP	21572407
MIRT469956	hsa-miR-6885-5p	PAR-CLIP	21572407
MIRT469955	hsa-miR-1273e	PAR-CLIP	21572407
MIRT469974	hsa-miR-548an	PAR-CLIP	23592263
MIRT469973	hsa-miR-6768-3p	PAR-CLIP	23592263
MIRT469972	hsa-miR-4484	PAR-CLIP	23592263
MIRT469971	hsa-miR-3714	PAR-CLIP	23592263
MIRT469970	hsa-miR-302f	PAR-CLIP	23592263
MIRT469969	hsa-miR-1910-3p	PAR-CLIP	23592263
MIRT469968	hsa-miR-6511a-5p	PAR-CLIP	23592263
MIRT469967	hsa-miR-4257	PAR-CLIP	23592263
MIRT469966	hsa-miR-4532	PAR-CLIP	23592263
MIRT469965	hsa-miR-219b-3p	PAR-CLIP	23592263
MIRT469964	hsa-miR-4537	PAR-CLIP	23592263
MIRT469963	hsa-miR-377-5p	PAR-CLIP	23592263
MIRT469962	hsa-miR-6086	PAR-CLIP	23592263
MIRT469961	hsa-miR-298	PAR-CLIP	23592263
MIRT469960	hsa-miR-2467-3p	PAR-CLIP	23592263
MIRT469959	hsa-miR-6499-3p	PAR-CLIP	23592263
MIRT469958	hsa-miR-486-3p	PAR-CLIP	23592263
MIRT469957	hsa-miR-328-5p	PAR-CLIP	23592263
MIRT469956	hsa-miR-6885-5p	PAR-CLIP	23592263
MIRT037821	hsa-miR-455-3p	PAR-CLIP	23592263
MIRT469955	hsa-miR-1273e	PAR-CLIP	23592263
MIRT469954	hsa-miR-6516-5p	PAR-CLIP	23592263
MIRT469952	hsa-miR-6858-3p	PAR-CLIP	23592263
MIRT469953	hsa-miR-4676-5p	PAR-CLIP	23592263
MIRT469951	hsa-miR-575	PAR-CLIP	23592263
MIRT469950	hsa-miR-1296-3p	PAR-CLIP	23592263
MIRT469949	hsa-miR-4795-5p	PAR-CLIP	23592263
MIRT469948	hsa-miR-6878-5p	PAR-CLIP	23592263
MIRT469947	hsa-miR-3175	PAR-CLIP	23592263
MIRT469946	hsa-miR-625-5p	PAR-CLIP	23592263
MIRT469945	hsa-miR-4723-5p	PAR-CLIP	23592263
MIRT469944	hsa-miR-5698	PAR-CLIP	23592263
MIRT469942	hsa-miR-6870-5p	PAR-CLIP	23592263
MIRT469943	hsa-miR-7111-5p	PAR-CLIP	23592263
MIRT469941	hsa-miR-4525	PAR-CLIP	23592263
MIRT469940	hsa-miR-5010-5p	PAR-CLIP	23592263
MIRT469939	hsa-miR-3190-3p	PAR-CLIP	23592263
MIRT469938	hsa-miR-4447	PAR-CLIP	23592263
MIRT469937	hsa-miR-4472	PAR-CLIP	23592263
MIRT469936	hsa-miR-4662a-5p	PAR-CLIP	23592263
MIRT469935	hsa-miR-1275	PAR-CLIP	23592263
MIRT469934	hsa-miR-4665-5p	PAR-CLIP	23592263
MIRT1276067	hsa-miR-122	CLIP-seq
MIRT1276068	hsa-miR-1276	CLIP-seq
MIRT1276069	hsa-miR-1911	CLIP-seq
MIRT1276070	hsa-miR-193a-3p	CLIP-seq
MIRT1276071	hsa-miR-193b	CLIP-seq
MIRT1276072	hsa-miR-199a-3p	CLIP-seq
MIRT1276073	hsa-miR-199b-3p	CLIP-seq
MIRT1276074	hsa-miR-299-5p	CLIP-seq
MIRT1276075	hsa-miR-3064-3p	CLIP-seq
MIRT1276076	hsa-miR-3129-5p	CLIP-seq
MIRT1276077	hsa-miR-3148	CLIP-seq
MIRT1276078	hsa-miR-3176	CLIP-seq
MIRT1276079	hsa-miR-3198	CLIP-seq
MIRT1276080	hsa-miR-3616-3p	CLIP-seq
MIRT1276081	hsa-miR-3922-3p	CLIP-seq
MIRT1276082	hsa-miR-4309	CLIP-seq
MIRT1276083	hsa-miR-431	CLIP-seq
MIRT1276084	hsa-miR-432	CLIP-seq
MIRT1276085	hsa-miR-4712-5p	CLIP-seq
MIRT1276086	hsa-miR-4715-3p	CLIP-seq
MIRT1276087	hsa-miR-4721	CLIP-seq
MIRT1276088	hsa-miR-4761-3p	CLIP-seq
MIRT1276089	hsa-miR-770-5p	CLIP-seq
MIRT1276067	hsa-miR-122	CLIP-seq
MIRT1276090	hsa-miR-1254	CLIP-seq
MIRT1276091	hsa-miR-1255a	CLIP-seq
MIRT1276092	hsa-miR-1255b	CLIP-seq
MIRT1276068	hsa-miR-1276	CLIP-seq
MIRT1276069	hsa-miR-1911	CLIP-seq
MIRT1276070	hsa-miR-193a-3p	CLIP-seq
MIRT1276071	hsa-miR-193b	CLIP-seq
MIRT1276074	hsa-miR-299-5p	CLIP-seq
MIRT1276075	hsa-miR-3064-3p	CLIP-seq
MIRT1276093	hsa-miR-3116	CLIP-seq
MIRT1276094	hsa-miR-3135b	CLIP-seq
MIRT1276077	hsa-miR-3148	CLIP-seq
MIRT1276095	hsa-miR-3150b-3p	CLIP-seq
MIRT1276078	hsa-miR-3176	CLIP-seq
MIRT1276096	hsa-miR-3179	CLIP-seq
MIRT1276097	hsa-miR-3188	CLIP-seq
MIRT1276098	hsa-miR-3189-5p	CLIP-seq
MIRT1276079	hsa-miR-3198	CLIP-seq
MIRT1276080	hsa-miR-3616-3p	CLIP-seq
MIRT1276099	hsa-miR-3652	CLIP-seq
MIRT1276100	hsa-miR-3690	CLIP-seq
MIRT1276101	hsa-miR-370	CLIP-seq
MIRT1276081	hsa-miR-3922-3p	CLIP-seq
MIRT1276082	hsa-miR-4309	CLIP-seq
MIRT1276084	hsa-miR-432	CLIP-seq
MIRT1276102	hsa-miR-4430	CLIP-seq
MIRT1276103	hsa-miR-4446-3p	CLIP-seq
MIRT1276104	hsa-miR-4492	CLIP-seq
MIRT1276105	hsa-miR-4498	CLIP-seq
MIRT1276106	hsa-miR-4529-5p	CLIP-seq
MIRT1276107	hsa-miR-4535	CLIP-seq
MIRT1276108	hsa-miR-4640-5p	CLIP-seq
MIRT1276087	hsa-miR-4721	CLIP-seq
MIRT1276109	hsa-miR-4726-5p	CLIP-seq
MIRT1276110	hsa-miR-4731-5p	CLIP-seq
MIRT1276111	hsa-miR-4758-3p	CLIP-seq
MIRT1276088	hsa-miR-4761-3p	CLIP-seq
MIRT1276112	hsa-miR-4763-5p	CLIP-seq
MIRT1276113	hsa-miR-4766-5p	CLIP-seq
MIRT1276114	hsa-miR-4784	CLIP-seq
MIRT1276115	hsa-miR-488	CLIP-seq
MIRT1276116	hsa-miR-492	CLIP-seq
MIRT1276117	hsa-miR-515-3p	CLIP-seq
MIRT1276118	hsa-miR-519e	CLIP-seq
MIRT1276119	hsa-miR-550a	CLIP-seq
MIRT1276120	hsa-miR-762	CLIP-seq
MIRT1276121	hsa-miR-765	CLIP-seq
MIRT1276122	hsa-miR-939	CLIP-seq
MIRT1276078	hsa-miR-3176	CLIP-seq
MIRT2081186	hsa-miR-3194-3p	CLIP-seq
MIRT1276081	hsa-miR-3922-3p	CLIP-seq
MIRT1276103	hsa-miR-4446-3p	CLIP-seq
MIRT2081187	hsa-miR-4680-5p	CLIP-seq
MIRT1276087	hsa-miR-4721	CLIP-seq
MIRT2081188	hsa-miR-548c-3p	CLIP-seq
MIRT2307091	hsa-miR-1224-5p	CLIP-seq
MIRT2307092	hsa-miR-1913	CLIP-seq
MIRT2307093	hsa-miR-3155	CLIP-seq
MIRT2307094	hsa-miR-3155b	CLIP-seq
MIRT1276078	hsa-miR-3176	CLIP-seq
MIRT2307095	hsa-miR-324-3p	CLIP-seq
MIRT1276081	hsa-miR-3922-3p	CLIP-seq
MIRT2307096	hsa-miR-4269	CLIP-seq
MIRT2307097	hsa-miR-4287	CLIP-seq
MIRT2307098	hsa-miR-4645-5p	CLIP-seq
MIRT2307099	hsa-miR-4649-3p	CLIP-seq
MIRT2307100	hsa-miR-4673	CLIP-seq
MIRT2081187	hsa-miR-4680-5p	CLIP-seq
MIRT2307101	hsa-miR-4685-3p	CLIP-seq
MIRT2307102	hsa-miR-4726-3p	CLIP-seq
MIRT2307103	hsa-miR-4749-3p	CLIP-seq
MIRT2307104	hsa-miR-4751	CLIP-seq
MIRT2307105	hsa-miR-484	CLIP-seq
MIRT2307106	hsa-miR-545	CLIP-seq
MIRT2307107	hsa-miR-570	CLIP-seq
MIRT1276067	hsa-miR-122	CLIP-seq
MIRT1276090	hsa-miR-1254	CLIP-seq
MIRT1276068	hsa-miR-1276	CLIP-seq
MIRT1276070	hsa-miR-193a-3p	CLIP-seq
MIRT1276071	hsa-miR-193b	CLIP-seq
MIRT2604623	hsa-miR-205	CLIP-seq
MIRT2604624	hsa-miR-214	CLIP-seq
MIRT1276074	hsa-miR-299-5p	CLIP-seq
MIRT1276075	hsa-miR-3064-3p	CLIP-seq
MIRT2604625	hsa-miR-3065-3p	CLIP-seq
MIRT1276093	hsa-miR-3116	CLIP-seq
MIRT2604626	hsa-miR-3130-3p	CLIP-seq
MIRT1276094	hsa-miR-3135b	CLIP-seq
MIRT1276077	hsa-miR-3148	CLIP-seq
MIRT2307093	hsa-miR-3155	CLIP-seq
MIRT2307094	hsa-miR-3155b	CLIP-seq
MIRT1276078	hsa-miR-3176	CLIP-seq
MIRT1276096	hsa-miR-3179	CLIP-seq
MIRT2081186	hsa-miR-3194-3p	CLIP-seq
MIRT1276079	hsa-miR-3198	CLIP-seq
MIRT1276080	hsa-miR-3616-3p	CLIP-seq
MIRT2604627	hsa-miR-3619-5p	CLIP-seq
MIRT1276099	hsa-miR-3652	CLIP-seq
MIRT1276100	hsa-miR-3690	CLIP-seq
MIRT1276081	hsa-miR-3922-3p	CLIP-seq
MIRT2604628	hsa-miR-4267	CLIP-seq
MIRT2604629	hsa-miR-4291	CLIP-seq
MIRT1276082	hsa-miR-4309	CLIP-seq
MIRT1276084	hsa-miR-432	CLIP-seq
MIRT2604630	hsa-miR-4323	CLIP-seq
MIRT1276102	hsa-miR-4430	CLIP-seq
MIRT1276103	hsa-miR-4446-3p	CLIP-seq
MIRT2604631	hsa-miR-4476	CLIP-seq
MIRT1276104	hsa-miR-4492	CLIP-seq
MIRT1276105	hsa-miR-4498	CLIP-seq
MIRT1276107	hsa-miR-4535	CLIP-seq
MIRT2604632	hsa-miR-4661-3p	CLIP-seq
MIRT1276087	hsa-miR-4721	CLIP-seq
MIRT2604633	hsa-miR-4753-5p	CLIP-seq
MIRT1276088	hsa-miR-4761-3p	CLIP-seq
MIRT1276113	hsa-miR-4766-5p	CLIP-seq
MIRT2604634	hsa-miR-4793-3p	CLIP-seq
MIRT2307105	hsa-miR-484	CLIP-seq
MIRT2604635	hsa-miR-485-3p	CLIP-seq
MIRT1276115	hsa-miR-488	CLIP-seq
MIRT1276116	hsa-miR-492	CLIP-seq
MIRT2604636	hsa-miR-494	CLIP-seq
MIRT2307107	hsa-miR-570	CLIP-seq
MIRT2604637	hsa-miR-572	CLIP-seq
MIRT2604638	hsa-miR-615-3p	CLIP-seq
MIRT2604639	hsa-miR-761	CLIP-seq
MIRT1276120	hsa-miR-762	CLIP-seq
MIRT1276121	hsa-miR-765	CLIP-seq
MIRT2604640	hsa-miR-885-3p	CLIP-seq
MIRT2604641	hsa-miR-922	CLIP-seq
MIRT1276067	hsa-miR-122	CLIP-seq
MIRT1276090	hsa-miR-1254	CLIP-seq
MIRT1276068	hsa-miR-1276	CLIP-seq
MIRT1276070	hsa-miR-193a-3p	CLIP-seq
MIRT1276071	hsa-miR-193b	CLIP-seq
MIRT1276074	hsa-miR-299-5p	CLIP-seq
MIRT1276075	hsa-miR-3064-3p	CLIP-seq
MIRT2604625	hsa-miR-3065-3p	CLIP-seq
MIRT1276093	hsa-miR-3116	CLIP-seq
MIRT2604626	hsa-miR-3130-3p	CLIP-seq
MIRT1276094	hsa-miR-3135b	CLIP-seq
MIRT1276077	hsa-miR-3148	CLIP-seq
MIRT2307093	hsa-miR-3155	CLIP-seq
MIRT2307094	hsa-miR-3155b	CLIP-seq
MIRT1276078	hsa-miR-3176	CLIP-seq
MIRT1276096	hsa-miR-3179	CLIP-seq
MIRT2081186	hsa-miR-3194-3p	CLIP-seq
MIRT1276079	hsa-miR-3198	CLIP-seq
MIRT1276080	hsa-miR-3616-3p	CLIP-seq
MIRT1276099	hsa-miR-3652	CLIP-seq
MIRT1276100	hsa-miR-3690	CLIP-seq
MIRT1276081	hsa-miR-3922-3p	CLIP-seq
MIRT2604628	hsa-miR-4267	CLIP-seq
MIRT1276082	hsa-miR-4309	CLIP-seq
MIRT1276084	hsa-miR-432	CLIP-seq
MIRT2604630	hsa-miR-4323	CLIP-seq
MIRT1276102	hsa-miR-4430	CLIP-seq
MIRT1276103	hsa-miR-4446-3p	CLIP-seq
MIRT2604631	hsa-miR-4476	CLIP-seq
MIRT1276104	hsa-miR-4492	CLIP-seq
MIRT1276105	hsa-miR-4498	CLIP-seq
MIRT1276107	hsa-miR-4535	CLIP-seq
MIRT1276087	hsa-miR-4721	CLIP-seq
MIRT1276088	hsa-miR-4761-3p	CLIP-seq
MIRT2604634	hsa-miR-4793-3p	CLIP-seq
MIRT2307105	hsa-miR-484	CLIP-seq
MIRT1276116	hsa-miR-492	CLIP-seq
MIRT2604636	hsa-miR-494	CLIP-seq
MIRT2604637	hsa-miR-572	CLIP-seq
MIRT2604638	hsa-miR-615-3p	CLIP-seq
MIRT1276120	hsa-miR-762	CLIP-seq
MIRT1276121	hsa-miR-765	CLIP-seq
MIRT2604640	hsa-miR-885-3p	CLIP-seq

Show/Hide all (34)

GO ID	Ontology	Definition	Evidence	Reference
GO:0004721	Function	Phosphoprotein phosphatase activity	IDA	21976490
GO:0004721	Function	Phosphoprotein phosphatase activity	IEA
GO:0004725	Function	Protein tyrosine phosphatase activity	IBA
GO:0004725	Function	Protein tyrosine phosphatase activity	IDA	10338209
GO:0004725	Function	Protein tyrosine phosphatase activity	IEA
GO:0004725	Function	Protein tyrosine phosphatase activity	IMP	23358419
GO:0005001	Function	Transmembrane receptor protein tyrosine phosphatase activity	IEA
GO:0005001	Function	Transmembrane receptor protein tyrosine phosphatase activity	TAS	8995282
GO:0005886	Component	Plasma membrane	TAS	2972792
GO:0007155	Process	Cell adhesion	IEA
GO:0007155	Process	Cell adhesion	TAS	7665159
GO:0007165	Process	Signal transduction	IBA
GO:0007185	Process	Cell surface receptor protein tyrosine phosphatase signaling pathway	IEA
GO:0007185	Process	Cell surface receptor protein tyrosine phosphatase signaling pathway	TAS	8995282
GO:0007399	Process	Nervous system development	IBA
GO:0008201	Function	Heparin binding	IEA
GO:0010975	Process	Regulation of neuron projection development	IEA
GO:0016020	Component	Membrane	IEA
GO:0016477	Process	Cell migration	IMP	23358419
GO:0016787	Function	Hydrolase activity	IEA
GO:0031102	Process	Neuron projection regeneration	IEA
GO:0035335	Process	Peptidyl-tyrosine dephosphorylation	IMP	23358419
GO:0035373	Function	Chondroitin sulfate proteoglycan binding	IEA
GO:0043005	Component	Neuron projection	IEA
GO:0043025	Component	Neuronal cell body	IEA
GO:0044877	Function	Protein-containing complex binding	IEA
GO:0048679	Process	Regulation of axon regeneration	IEA
GO:0050839	Function	Cell adhesion molecule binding	IPI	23986473
GO:0070062	Component	Extracellular exosome	HDA	19199708
GO:0099560	Process	Synaptic membrane adhesion	IBA
GO:0099560	Process	Synaptic membrane adhesion	IDA	26321637
GO:0099560	Process	Synaptic membrane adhesion	IEA
GO:0099560	Process	Synaptic membrane adhesion	IMP	26321637
GO:1900121	Process	Negative regulation of receptor binding	IMP	23358419

MIM	HGNC	e!Ensembl
179590	9670	ENSG00000142949

P10586

Protein name

Receptor-type tyrosine-protein phosphatase F (EC 3.1.3.48) (Leukocyte common antigen related) (LAR)

Protein function

Possible cell adhesion receptor. It possesses an intrinsic protein tyrosine phosphatase activity (PTPase) and dephosphorylates EPHA2 regulating its activity.; The first PTPase domain has enzymatic activity, while the second one seems t

PDB

1LAR , 2DJU , 2DN7 , 2EDX , 2EDY , 2YD5 , 2YD8 , 4N5U , 6KR4 , 6TPT , 6TPU , 6TPV , 6TPW

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF07679	I-set	33 → 124	Immunoglobulin I-set domain	Domain
PF07679	I-set	135 → 225	Immunoglobulin I-set domain	Domain
PF07679	I-set	232 → 315	Immunoglobulin I-set domain	Domain
PF00041	fn3	320 → 401	Fibronectin type III domain	Domain
PF00041	fn3	415 → 500	Fibronectin type III domain	Domain
PF00041	fn3	513 → 594	Fibronectin type III domain	Domain
PF00041	fn3	608 → 696	Fibronectin type III domain	Domain
PF00041	fn3	710 → 809	Fibronectin type III domain	Domain
PF00041	fn3	823 → 903	Fibronectin type III domain	Domain
PF00041	fn3	917 → 1000	Fibronectin type III domain	Domain
PF00102	Y_phosphatase	1375 → 1606	Protein-tyrosine phosphatase	Domain
PF00102	Y_phosphatase	1664 → 1897	Protein-tyrosine phosphatase	Domain

Sequence

MAPEPAPGRTMVPLVPALVMLGLVAGAHGDSKPVFIKVPEDQTGLSGGVASFVCQATGEP
KPRITWMKKGKKVSSQRFEVIEFDDGAGSVLRIQPLRVQRDEAIYECTATNSLGEINTSA
KLSVLEEEQLPPGFPSIDMGPQLKVVEKARTATMLCAAGGNPDPEISWFKDFLPVDPATS
NGRIKQLRSGALQIESSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVAPRFSIPPSS
QEVMPGGSVNLTCVAVGAPMPYVKWMMGAEELTKEDEMPVGRNVLELSNVVRSANYTCVA
ISSLGMIEATAQVTVKALPKPPIDLVVTETTATSVTLTWDSGNSEPVTYYGIQYRAAGTE
GPFQEVDGVATTRYSIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQAPSSPPRRV
QARMLSASTMLVQWEPPEEPNGLVRGYRVYYTPDSRRPPNAWHKHNTDAGLLTTVGSLLP
GITYSLRVLAFTAVGDGPPSPTIQVKTQQGVPAQPADFQAEVESDTRIQLSWLLPPQERI
IMYELVYWAAEDEDQQHKVTFDPTSSYTLEDLKPDTLYRFQLAARSDMGVGVFTPTIEAR
TAQSTPSAPPQKVMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRGRHVVD
GISREHSSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDEDVPSGPPRKVEVEPL
NSTAVHVYWKLPVPSKQHGQIRGYQVTYVRLENGEPRGLPIIQDVMLAEAQWRPEESEDY
ETTISGLTPETTYSVTVAAYTTKGDGARSKPKIVTTTGAVPGRPTMMISTTAMNTALLQW
HPPKELPGELLGYRLQYCRADEARPNTIDFGKDDQHFTVTGLHKGTTYIFRLAAKNRAGL
GEEFEKEIRTPEDLPSGFPQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTVVFRDINS
QQELQNITTDTRFTLTGLKPDTTYDIKVRAWTSKGSGPLSPSIQSRTMPVEQVFAKNFRV
AAAMKTSVLLSWEVPDSYKSAVPFKILYNGQSVEVDGHSMRKLIADLQPNTEYSFVLMNR
GSSAGGLQHLVSIRTAPDLLPHKPLPASAYIEDGRFDLSMPHVQDPSLVRWFYIVVVPID
RVGGSMLTPRWSTPEELELDELLEAIEQGGEEQRRRRRQAERLKPYVAAQLDVLPETFTL
GDKKNYRGFYNRPLSPDLSYQCFVLASLKEPMDQKRYASSPYSDEIVVQVTPAQQQEEPE
MLWVTGPVLAVILIILIVIAILLFKRKRTHSPSSKDEQSIGLKDSLLAHSSDPVEMRRLN
YQTPGMRDHPPIPITDLADNIERLKANDGLKFSQEYESIDPGQQFTWENSNLEVNKPKNR
YANVIAYDHSRVILTSIDGVPGSDYINANYIDGYRKQNAYIATQGPLPETMGDFWRMVWE
QRTATVVMMTRLEEKSRVKCDQYWPARGTETCGLIQVTLLDTVELATYTVRTFALHKSGS
SEKRELRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPLDAGPMVVHCSAGVGRTGCFIV
IDAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYVFIHEALLEAATCGHTEVPARNL
YAHIQKLGQVPPGESVTAMELEFKLLASSKAHTSRFISANLPCNKFKNRLVNIMPYELTR
VCLQPIRGVEGSDYINASFLDGYRQQKAYIATQGPLAESTEDFWRMLWEHNSTIIVMLTK
LREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTIRQFQF
TDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMR
YEGVVDMFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT

Sequence length

1907

Interactions

View interactions

Show/Hide Causal Diseases (1)

Phenotype Name	Clinical Significance	dbSNP ID	RCV Accession
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Breasts and/or nipples, aplasia or hypoplasia of, 2	Pathogenic	rs1131692054	RCV000144043

Show/Hide Unknown Diseases (7)

Phenotype Name	Clinical Significance	dbSNP ID	RCV Accession
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Cervical cancer	Benign	rs144175107	RCV005906116
EBV-positive nodal T- and NK-cell lymphoma	Likely benign	rs774549273	RCV004557908
Gastric cancer	Likely benign	rs17849118	RCV005902958
Malignant tumor of esophagus	Benign	rs144175107	RCV005906115
PTPRF-related disorder	Benign; Likely benign; Uncertain significance	rs3828151, rs199963215, rs3748800, rs140062416, rs1065771, rs199980050, rs76320098, rs767266768, rs3748796, rs201561159, rs61733187, rs1318858989, rs781567773, rs146700581, rs1041299405 View all (15 more)	RCV003976154 RCV003894762 RCV003909342 RCV003929849 RCV003974649 RCV003974168 RCV003979343 RCV003911623 RCV003961716 RCV003954306 RCV003959524 RCV003959790 RCV003963952 RCV003927090 RCV003929524 RCV003939753 RCV003951788 RCV003937234 RCV003922164 RCV003922323 RCV003932014 RCV003934280 RCV003977006 RCV003957211 RCV003966804 RCV003932922 RCV003910790 RCV003912873 RCV003983265 RCV003936203
Thymoma	Likely benign	rs17849118	RCV005902959
Thyroid cancer, nonmedullary, 1	Uncertain significance	rs755881493	RCV005930952

Show/Hide Text Mining Associations (22)

Disease Name	Relationship Type	References
Associations from Text MiningDisease associations identified through Pubtator
Alternating hemiplegia of childhood	Associate	32929364
Brain Diseases	Associate	37446291
Breast Neoplasms	Associate	19004008, 26336805
Carcinoma Hepatocellular	Associate	12679910, 34969357
Carcinoma Non Small Cell Lung	Associate	26291013
Endometrial Neoplasms	Associate	37737665
Gallbladder Neoplasms	Associate	35035811
Insulin Resistance	Associate	23861770
Lung Neoplasms	Associate	25638566
Melanoma	Associate	35606887
Neoplasm Metastasis	Associate	35606887
Neoplasms	Inhibit	1547787
Neoplasms	Associate	24622401, 26291013, 28453464, 33465697, 35238908, 37897865, 37979170
Obesity	Associate	9218523
Parkinson Disease	Associate	37446291
Pleural Effusion	Associate	25638566
Polycystic Ovary Syndrome	Associate	37737665
Prostatic Neoplasms	Associate	15816537, 28453464
Thyroid Cancer Papillary	Associate	31642198
Thyroid Neoplasms	Associate	12698188
Triple Negative Breast Neoplasms	Associate	25208879, 28299476, 29053266, 30312311, 30853353, 31005169, 31270600, 31836816, 32234905, 32406563, 35046202, 35105939, 35431224, 36257316, 36536459 View all (5 more)
Urinary Bladder Neoplasms	Associate	29739919

PTPRF (protein tyrosine phosphatase receptor type F)