Gene Gene information from NCBI Gene database.
Entrez ID 1956
Gene name Epidermal growth factor receptor
Gene symbol EGFR
Synonyms (NCBI Gene)
ERBBERBB1ERRPHER1NISBD2NNCISPIG61mENA
Chromosome 7
Chromosome location 7p11.2
Summary The protein encoded by this gene is a transmembrane glycoprotein that is a member of the protein kinase superfamily. This protein is a receptor for members of the epidermal growth factor family. EGFR is a cell surface protein that binds to epidermal growt
SNPs SNP information provided by dbSNP.
76
SNP ID Visualize variation Clinical significance Consequence
rs28929495 G>A,C,T Pathogenic, likely-pathogenic, not-provided, drug-response Missense variant, genic downstream transcript variant, coding sequence variant
rs121434568 T>A,G Drug-response, pathogenic, likely-pathogenic Genic downstream transcript variant, missense variant, coding sequence variant
rs121913229 G>C Uncertain-significance, likely-pathogenic Genic downstream transcript variant, missense variant, coding sequence variant
rs121913231 C>T Likely-pathogenic Genic downstream transcript variant, missense variant, coding sequence variant
rs121913418 G>A,T Uncertain-significance, likely-pathogenic Genic downstream transcript variant, missense variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
248
miRTarBase ID miRNA Experiments Reference
MIRT002289 hsa-miR-7-5p real-time RT-PCRReporter assayWestern blot 18483236
MIRT002289 hsa-miR-7-5p Luciferase reporter assay 18483236
MIRT002289 hsa-miR-7-5p Luciferase reporter assay 18483236
MIRT002289 hsa-miR-7-5p Luciferase reporter assay 18483236
MIRT002289 hsa-miR-7-5p Western blot 18483236
Transcription factors Transcription factors information provided by TRRUST V2 database.
33
Transcription factor Regulation Reference
AR Activation 11556855;21613411
BCL3 Activation 17881446
BRCA1 Repression 21396117
CREBBP Unknown 21464950
EGR1 Activation 11830539
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
156
GO ID Ontology Definition Evidence Reference
GO:0000139 Component Golgi membrane IEA
GO:0000165 Process MAPK cascade IEA
GO:0000166 Function Nucleotide binding IEA
GO:0000902 Process Cell morphogenesis IEA
GO:0001503 Process Ossification NAS 12925580
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
131550 3236 ENSG00000146648
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P00533
Protein name Epidermal growth factor receptor (EC 2.7.10.1) (Proto-oncogene c-ErbB-1) (Receptor tyrosine-protein kinase erbB-1)
Protein function Receptor tyrosine kinase binding ligands of the EGF family and activating several signaling cascades to convert extracellular cues into appropriate cellular responses (PubMed:10805725, PubMed:27153536, PubMed:2790960, PubMed:35538033). Known lig
PDB 1IVO , 1M14 , 1M17 , 1MOX , 1NQL , 1XKK , 1YY9 , 1Z9I , 2EB2 , 2EB3 , 2GS2 , 2GS6 , 2GS7 , 2ITN , 2ITO , 2ITP , 2ITQ , 2ITT , 2ITU , 2ITV , 2ITW , 2ITX , 2ITY , 2ITZ , 2J5E , 2J5F , 2J6M , 2JIT , 2JIU , 2JIV , 2KS1 , 2M0B , 2M20 , 2N5S , 2RF9 , 2RFD , 2RFE , 2RGP , 3B2U , 3B2V , 3BEL , 3BUO , 3C09 , 3G5V , 3G5Y , 3GOP , 3GT8 , 3IKA , 3LZB , 3NJP , 3OB2
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01030 Recep_L_domain 57 168 Receptor L domain Repeat
PF00757 Furin-like 177 338 Furin-like cysteine rich region Domain
PF01030 Recep_L_domain 361 481 Receptor L domain Repeat
PF14843 GF_recep_IV 505 637 Growth factor receptor domain IV Domain
PF07714 PK_Tyr_Ser-Thr 712 968 Protein tyrosine and serine/threonine kinase Domain
Tissue specificity TISSUE SPECIFICITY: Ubiquitously expressed. Isoform 2 is also expressed in ovarian cancers. {ECO:0000269|PubMed:17671655}.
Sequence
MRPSGTAGAALLALLAALCPASRALEEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEV
VLGNLEITYVQRNYDLSFLKTIQEVAGYVLIALNTVERIPLENLQIIRGNMYYENSYALA
VLSNYDANKTGLKELPMRNLQEILHGAVRFSNNPALCNVESIQWRDIV
SSDFLSNMSMDF
QNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGC
TGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYV
VTDHGSCVRACGADSYEMEEDGVRKCKKCEGPCRKVCN
GIGIGEFKDSLSINATNIKHFK
NCTSISGDLHILPVAFRGDSFTHTPPLDPQELDILKTVKEITGFLLIQAWPENRTDLHAF
ENLEIIRGRTKQHGQFSLAVVSLNITSLGLRSLKEISDGDVIISGNKNLCYANTINWKKL
F
GTSGQKTKIISNRGENSCKATGQVCHALCSPEGCWGPEPRDCVSCRNVSRGRECVDKCN
LLEGEPREFVENSECIQCHPECLPQAMNITCTGRGPDNCIQCAHYIDGPHCVKTCPAGVM
GENNTLVWKYADAGHVCHLCHPNCTYGCTGPGLEGCP
TNGPKIPSIATGMVGALLLLLVV
ALGIGLFMRRRHIVRKRTLRRLLQERELVEPLTPSGEAPNQALLRILKETEFKKIKVLGS
GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI
CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAA
RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY
GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPK
FRELIIEF
SKMARDPQRYLVIQGDERMHLPSPTDSNFYRALMDEEDMDDVVDADEYLIPQ
QGFFSSPSTSRTPLLSSLSATSNNSTVACIDRNGLQSCPIKEDSFLQRYSSDPTGALTED
SIDDTFLPVPEYINQSVPKRPAGSVQNPVYHNQPLNPAPSRDPHYQDPHSTAVGNPEYLN
TVQPTCVNSTFDSPAHWAQKGSHQISLDNPDYQQDFFPKEAKPNGIFKGSTAENAEYLRV
APQSSEFIGA
Sequence length 1210
Interactions View interactions
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
4643
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Cowden syndrome 1 Pathogenic rs886037891 RCV000256393
EGFR-related lung cancer Pathogenic; Likely pathogenic rs1785702810, rs1787407972, rs748491031, rs1785628941, rs1166325650, rs1787409872, rs2128965518, rs1034084415, rs2128971690, rs2128958231, rs2128935161, rs776490661, rs2128951424, rs2128969953, rs2128968655
View all (34 more)
RCV001315475
RCV001324044
RCV001315217
RCV001349471
RCV001350939
RCV001348004
RCV001367318
RCV001363825
RCV001950696
RCV001992419
RCV001967377
RCV001958963
RCV002014890
RCV001926874
RCV002016203
RCV001960534
RCV001956085
RCV002006009
RCV001998103
RCV001849972
RCV002686081
RCV002820383
RCV002851315
RCV002881477
RCV002876392
RCV002913948
RCV003022506
RCV003046266
RCV003040387
RCV003039372
RCV003536070
RCV003536269
RCV003536255
RCV003536241
RCV003536481
RCV003536561
RCV003536886
RCV003649773
RCV003650941
RCV003650897
RCV003652484
RCV003653932
RCV003651660
RCV003651711
RCV003852327
RCV003875200
RCV001236060
RCV001246909
RCV001302655
RCV001307555
RCV001307449
Inflammatory skin and bowel disease, neonatal, 2 Pathogenic rs606231253 RCV000144851
Lip and oral cavity carcinoma Likely pathogenic rs1786518484 RCV001255641
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Adenocarcinoma of lung, response to tyrosine kinase inhibitor in, somatic drug response rs121434568 RCV000018084
Cerebral arteriovenous malformation Conflicting classifications of pathogenicity rs909905659 RCV000656335
Cerebral palsy Conflicting classifications of pathogenicity rs1444692842 RCV001796440
Cervical cancer Benign; Likely benign rs17336800 RCV005906975
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
3 Methylglutaconic Aciduria Type I Associate 19686285
Achalasia Addisonianism Alacrimia syndrome Associate 22431556
Acidemia isovaleric Associate 33533191
Acne Vulgaris Associate 34025636
Acquired ichthyosis Associate 24691054, 36303457
Acquired Immunodeficiency Syndrome Associate 21083371
Acrocephalosyndactylia Associate 33592873
Acrospiroma Associate 19252473
ACTH Secreting Pituitary Adenoma Associate 35563252
Acute Coronary Syndrome Associate 18664296