Gene Gene information from NCBI Gene database.
Entrez ID 1050
Gene name CCAAT enhancer binding protein alpha
Gene symbol CEBPA
Synonyms (NCBI Gene)
C/EBP-alphaCEBP
Chromosome 19
Chromosome location 19q13.11
Summary This intronless gene encodes a transcription factor that contains a basic leucine zipper (bZIP) domain and recognizes the CCAAT motif in the promoters of target genes. The encoded protein functions in homodimers and also heterodimers with CCAAT/enhancer-b
miRNA miRNA information provided by mirtarbase database.
174
miRTarBase ID miRNA Experiments Reference
MIRT002025 hsa-miR-124-3p Western blotReporter assay 18451139
MIRT002025 hsa-miR-124-3p Luciferase reporter assay 18451139
MIRT000390 hsa-miR-1-3p Luciferase reporter assay 18818206
MIRT002025 hsa-miR-124-3p Review 20029422
MIRT002025 hsa-miR-124-3p Review 20029422
Transcription factors Transcription factors information provided by TRRUST V2 database.
8
Transcription factor Regulation Reference
DDIT3 Repression 21983012
GATA1 Repression 19825991
LEF1 Unknown 19620402
MYB Unknown 10706719
MYC Repression 19259613
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
140
GO ID Ontology Definition Evidence Reference
GO:0000050 Process Urea cycle IEA
GO:0000122 Process Negative regulation of transcription by RNA polymerase II IEA
GO:0000122 Process Negative regulation of transcription by RNA polymerase II IEA
GO:0000122 Process Negative regulation of transcription by RNA polymerase II ISO
GO:0000785 Component Chromatin ISA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
116897 1833 ENSG00000245848
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P49715
Protein name CCAAT/enhancer-binding protein alpha (C/EBP alpha)
Protein function Transcription factor that coordinates proliferation arrest and the differentiation of myeloid progenitors, adipocytes, hepatocytes, and cells of the lung and the placenta. Binds directly to the consensus DNA sequence 5'-T[TG]NNGNAA[TG]-3' acting
PDB 6DC0 , 8K8C
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF07716 bZIP_2 281 334 Basic region leucine zipper Coiled-coil
Sequence
MESADFYEAEPRPPMSSHLQSPPHAPSSAAFGFPRGAGPAQPPAPPAAPEPLGGICEHET
SIDISAYIDPAAFNDEFLADLFQHSRQQEKAKAAVGPTGGGGGGDFDYPGAPAGPGGAVM
PGGAHGPPPGYGCAAAGYLDGRLEPLYERVGAPALRPLVIKQEPREEDEAKQLALAGLFP
YQPPPPPPPSHPHPHPPPAHLAAPHLQFQIAHCGQTTMHLQPGHPTPPPTPVPSPHPAPA
LGAAGLPGPGSALKGLGAAHPDLRASGGSGAGKAKKSVDKNSNEYRVRRERNNIAVRKSR
DKAKQRNVETQQKVLELTSDNDRLRKRVEQLSRE
LDTLRGIFRQLPESSLVKAMGNCA
Sequence length 358
Interactions View interactions
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
1033
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Acute myeloid leukemia Likely pathogenic; Pathogenic rs1600021258, rs2145264820, rs2145258913, rs2513332280, rs2513332000, rs2513331483, rs2513328486, rs2513332961, rs2513328286, rs2513332790, rs2513328406, rs2513332781, rs2513328365, rs2145264731, rs2145264339
View all (26 more)
RCV001315717
RCV001379181
RCV001785425
RCV002282592
RCV002282593
RCV002282594
RCV002282595
RCV002282596
RCV002282597
RCV002282598
RCV002282599
RCV002282600
RCV002282601
RCV002037764
RCV002035440
RCV002272627
RCV002272730
RCV002277720
RCV002277731
RCV002277736
RCV002277737
RCV002277738
RCV002277739
RCV002834594
RCV003635266
RCV000019126
RCV000019127
RCV000019129
RCV000019130
RCV000019131
RCV000019132
RCV000020587
RCV000464349
RCV000502416
RCV000503374
RCV000809619
RCV000798804
RCV001064133
RCV001054756
RCV001207644
RCV001240401
RCV002282506
RCV001880198
Hereditary cancer-predisposing syndrome Likely pathogenic rs2145262824, rs2145262808, rs2145262693 RCV002257354
RCV002255990
RCV002258643
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Autosomal dominant familial acute myeloid leukemia Conflicting classifications of pathogenicity rs530569305 RCV000509407
CEBPA-related disorder Likely benign; Conflicting classifications of pathogenicity; Uncertain significance; Benign rs981299051, rs1967184069, rs1967186909, rs2145262901, rs1440808608, rs375833261, rs535980233, rs878854703, rs746430067, rs752254340, rs900736074, rs2513333812, rs557100333, rs925688689, rs2513331799
View all (18 more)
RCV004756243
RCV003908794
RCV003951055
RCV003896092
RCV003963446
RCV004755820
RCV003955345
RCV003955344
RCV004755821
RCV003937905
RCV003392935
RCV003402909
RCV003897252
RCV003904369
RCV003982438
RCV003977034
RCV003899556
RCV003969870
RCV003941635
RCV003983569
RCV003962229
RCV003418180
RCV003942547
RCV003972785
RCV004755922
RCV004755923
RCV003905332
RCV003915488
RCV003905691
RCV003403447
RCV003918006
RCV003983173
RCV003965572
RCV003983205
RCV004756043
RCV004756052
RCV003943039
RCV003970654
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
Abdominal Injuries Associate 38477908
Acute erythroleukemia Associate 19304957, 25987038, 35032366
Adenocarcinoma of Lung Associate 11912209, 30984536
Adenocarcinoma of Lung Inhibit 28746919
Alzheimer Disease Associate 37735671
Anemia Hemolytic Associate 30942098
Anodontia Inhibit 19414368
Anti Neutrophil Cytoplasmic Antibody Associated Vasculitis Associate 22403660
Aortic Aneurysm Abdominal Associate 28912007
Asthma Associate 37301411