Gene Gene information from NCBI Gene database.
Entrez ID 633
Gene name Biglycan
Gene symbol BGN
Synonyms (NCBI Gene)
DSPG1MRLSPG-S1PGISEMDXSLRR1A
Chromosome X
Chromosome location Xq28
Summary This gene encodes a member of the small leucine-rich proteoglycan (SLRP) family of proteins. The encoded preproprotein is proteolytically processed to generate the mature protein, which plays a role in bone growth, muscle development and regeneration, and
SNPs SNP information provided by dbSNP.
7
SNP ID Visualize variation Clinical significance Consequence
rs879255604 A>G Pathogenic Missense variant, coding sequence variant
rs879255605 G>T Pathogenic Missense variant, coding sequence variant
rs886037823 G>A Pathogenic Stop gained, coding sequence variant
rs886037824 A>C Pathogenic Missense variant, coding sequence variant
rs886037825 G>A Pathogenic Missense variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
244
miRTarBase ID miRNA Experiments Reference
MIRT614284 hsa-miR-4311 HITS-CLIP 23824327
MIRT607442 hsa-miR-8485 HITS-CLIP 23824327
MIRT614284 hsa-miR-4311 HITS-CLIP 23824327
MIRT607442 hsa-miR-8485 HITS-CLIP 23824327
MIRT614284 hsa-miR-4311 HITS-CLIP 23824327
Transcription factors Transcription factors information provided by TRRUST V2 database.
2
Transcription factor Regulation Reference
NFKB1 Activation 15536164
RELA Activation 15536164
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
25
GO ID Ontology Definition Evidence Reference
GO:0001974 Process Blood vessel remodeling IEA
GO:0005201 Function Extracellular matrix structural constituent NAS 1860845
GO:0005515 Function Protein binding IPI 11598131, 32814053
GO:0005539 Function Glycosaminoglycan binding IEA
GO:0005576 Component Extracellular region HDA 27068509
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
301870 1044 ENSG00000182492
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P21810
Protein name Biglycan (Bone/cartilage proteoglycan I) (PG-S1)
Protein function May be involved in collagen fiber assembly.
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01462 LRRNT 62 89 Leucine rich repeat N-terminal domain Family
PF13855 LRR_8 90 150 Leucine rich repeat Repeat
PF13855 LRR_8 159 220 Leucine rich repeat Repeat
PF13855 LRR_8 229 289 Leucine rich repeat Repeat
Tissue specificity TISSUE SPECIFICITY: Detected in placenta (at protein level) (PubMed:32337544). Found in several connective tissues, especially in articular cartilages. {ECO:0000269|PubMed:32337544}.
Sequence
MWPLWRLVSLLALSQALPFEQRGFWDFTLDDGPFMMNDEEASGADTSGVLDPDSVTPTYS
AMCPFGCHCHLRVVQCSDLGLKSVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALV
LVNNKISKIHEKAFSPLRKLQKLYISKNHL
VEIPPNLPSSLVELRIHDNRIRKVPKGVFS
GLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKL
TGIPKDLPETLNELHLDHNK
IQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKL
ARVPSGLPDLK
LLQVVYLHSNNITKVGVNDFCPMGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLA
IQFGNYKK
Sequence length 368
Interactions View interactions
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
233
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Familial aortopathy Likely pathogenic rs2124232156 RCV003226724
Familial thoracic aortic aneurysm and aortic dissection Likely pathogenic rs886037823 RCV000256226
Meester-Loeys syndrome Likely pathogenic; Pathogenic rs1556993331, rs1556992691, rs2124232156, rs886037823, rs2521203628, rs2521227899, rs2521219168, rs1602981441 RCV004552085
RCV002272960
RCV004548503
RCV000412663
RCV004554227
RCV004554228
RCV004554232
RCV004554233
RCV004549861
X-linked spondyloepimetaphyseal dysplasia Likely pathogenic; Pathogenic rs782199865, rs879255604, rs879255605 RCV002306435
RCV000236799
RCV000235501
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
BGN-related disorder Uncertain significance; Likely benign; Conflicting classifications of pathogenicity; Benign rs113471463, rs368511428, rs370838225, rs373201465, rs782549135, rs1556993033, rs1316826218, rs782750179, rs1156526092, rs199928539, rs2521221485, rs2521227899, rs34441665, rs146322407 RCV003953688
RCV004746369
RCV003948621
RCV003923335
RCV003418295
RCV004746545
RCV003893112
RCV003911230
RCV003417054
RCV003402354
RCV003400004
RCV003896997
RCV003940618
RCV003968051
Cardiovascular phenotype Uncertain significance; Conflicting classifications of pathogenicity; Likely benign; Benign rs781931209, rs782672273, rs782662136, rs782239175, rs368511428, rs146073993, rs782342309, rs4833, rs1126499, rs2070933, rs782179570, rs200072898, rs188309404, rs201567818, rs781972404
View all (125 more)
RCV004035798
RCV003169782
RCV004995718
RCV002341811
RCV002395892
RCV002456683
RCV002329492
RCV002388569
RCV002343701
RCV002343703
RCV002343715
RCV002386547
RCV002422834
RCV002414334
RCV002386543
RCV002370304
RCV003163900
RCV002388687
RCV002422873
RCV005782243
RCV006357127
RCV004603134
RCV002331470
RCV004045918
RCV004039052
RCV002397986
RCV002334998
RCV004043688
RCV003382747
RCV003382706
RCV003170095
RCV004611921
RCV004041197
RCV002334863
RCV004043874
RCV005782238
RCV004041738
RCV002386605
RCV004996033
RCV002391262
RCV002352785
RCV003308024
RCV003161471
RCV002331717
RCV002382288
RCV003161642
RCV005782288
RCV002382363
RCV002443223
RCV002372853
RCV002364055
RCV002454749
RCV002320581
RCV002457099
RCV002363857
RCV002366469
RCV002364313
RCV002360321
RCV002335459
RCV002351360
RCV002335551
RCV002344432
RCV002351816
RCV002369573
RCV002412151
RCV002430237
RCV002430242
RCV002378673
RCV002378768
RCV002378794
RCV002376531
RCV002380035
RCV002380280
RCV002396303
RCV002412446
RCV002376761
RCV002380552
RCV002387357
RCV002405637
RCV002392605
RCV002410249
RCV002380743
RCV002394547
RCV002432429
RCV002432435
RCV002441394
RCV004070374
RCV003161822
RCV006342836
RCV005522800
RCV005782383
RCV003164797
RCV004990789
RCV005301158
RCV005522700
RCV005522711
RCV003308217
RCV006357511
RCV005301178
RCV004068194
RCV005774521
RCV006342705
RCV004140075
RCV004149641
RCV004161854
RCV003172087
RCV003172088
RCV003172089
RCV003171360
RCV004992138
RCV003288349
RCV003288350
RCV003297338
RCV003288351
RCV003297339
RCV003384122
RCV003384123
RCV003384125
RCV005522874
RCV005301331
RCV004992704
RCV004992746
RCV005774628
RCV006347840
RCV004605029
RCV004366881
RCV005522913
RCV004992908
RCV005784440
RCV005774666
RCV006347965
RCV004992934
RCV004511089
RCV004511090
RCV004511091
RCV004511092
RCV004511093
RCV004511094
RCV004511095
RCV002434320
RCV002320175
RCV002354721
RCV002454063
RCV002346056
RCV002382054
RCV002372567
RCV004029359
RCV002445035
Cervical cancer Benign rs743641 RCV005918132
Familial cancer of breast Benign; Likely benign rs743641, rs181456114 RCV005918131
RCV005920824
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
Adenocarcinoma Inhibit 33709550
Alzheimer Disease Stimulate 17660861
Aortic Aneurysm Associate 27632686
Aortic Aneurysm Abdominal Stimulate 9786264
Aortic Dissection Associate 27632686
Aortic Rupture Associate 27632686
Aortic Valve Stenosis Associate 20382708, 21185747
Atherosclerosis Associate 8662974
Atrial Fibrillation Associate 34332113
Atrophy Associate 23831768