Gene Gene information from NCBI Gene database.
Entrez ID 476
Gene name ATPase Na+/K+ transporting subunit alpha 1
Gene symbol ATP1A1
Synonyms (NCBI Gene)
CMT2DDHOMGSMR2
Chromosome 1
Chromosome location 1p13.1
Summary The protein encoded by this gene belongs to the family of P-type cation transport ATPases, and to the subfamily of Na+/K+ -ATPases. Na+/K+ -ATPase is an integral membrane protein responsible for establishing and maintaining the electrochemical gradients o
SNPs SNP information provided by dbSNP.
7
SNP ID Visualize variation Clinical significance Consequence
rs11540945 T>G Pathogenic Non coding transcript variant, missense variant, coding sequence variant
rs724160008 TCTCAATGTTACTGT>- Pathogenic Coding sequence variant, inframe deletion, non coding transcript variant
rs724160010 T>G Pathogenic Coding sequence variant, missense variant, non coding transcript variant
rs1401759980 C>G,T Likely-pathogenic Missense variant, coding sequence variant, non coding transcript variant
rs1553190285 T>G Pathogenic Non coding transcript variant, coding sequence variant, missense variant
miRNA miRNA information provided by mirtarbase database.
169
miRTarBase ID miRNA Experiments Reference
MIRT016292 hsa-miR-193b-3p Proteomics 21512034
MIRT019537 hsa-miR-340-5p Sequencing 20371350
MIRT028862 hsa-miR-26b-5p Microarray 19088304
MIRT052345 hsa-let-7b-5p CLASH 23622248
MIRT050658 hsa-miR-18a-5p CLASH 23622248
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
100
GO ID Ontology Definition Evidence Reference
GO:0000166 Function Nucleotide binding IEA
GO:0002026 Process Regulation of the force of heart contraction IEA
GO:0002028 Process Regulation of sodium ion transport ISS
GO:0005391 Function P-type sodium:potassium-exchanging transporter activity IBA
GO:0005391 Function P-type sodium:potassium-exchanging transporter activity IDA 10636900, 19542013
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
182310 799 ENSG00000163399
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P05023
Protein name Sodium/potassium-transporting ATPase subunit alpha-1 (Na(+)/K(+) ATPase alpha-1 subunit) (EC 7.2.2.13) (Sodium pump subunit alpha-1)
Protein function This is the catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of sodium and potassium ions across the plasma membrane. This action creates the electrochemical gradient of sodium and potassi
PDB 7E1Z , 7E20 , 7E21
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00690 Cation_ATPase_N 43 111 Cation transporter/ATPase, N-terminus Domain
PF00122 E1-E2_ATPase 163 354 Family
PF13246 Cation_ATPase 426 521 Family
PF00689 Cation_ATPase_C 799 1008 Cation transporting ATPase, C-terminus Family
Sequence
MGKGVGRDKYEPAAVSEQGDKKGKKGKKDRDMDELKKEVSMDDHKLSLDELHRKYGTDLS
RGLTSARAAEILARDGPNALTPPPTTPEWIKFCRQLFGGFSMLLWIGAILC
FLAYSIQAA
TEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRNGEKMSI
NAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSPDFTNENPLETR
NIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPIAAEIEHFIHIITGVAV
FLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARK
NCLVKN
LEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGVSFDKTSATWLA
LSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKEMRERYAKIVEI
PFNSTNKYQLSIHKNPNTSEPQHLLVMKGAPERILDRCSSI
LLHGKEQPLDEELKDAFQN
AYLELGGLGERVLGFCHLFLPDEQFPEGFQFDTDDVNFPIDNLCFVGLISMIDPPRAAVP
DAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDA
KACVVHGSDLKDMTSEQLDDILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVN
DSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTL
TSNIPEITPFLIFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPK
TDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPIHLLGLRVDWDDRWINDVED
SYGQQWTYEQRKIVEFTCHTAFFVSIVVVQWADLVICKTRRNSVFQQGMKNKILIFGLFE
ETALAAFLSYCPGMGVALRMYPLKPTWWFCAFPYSLLIFVYDEVRKLI
IRRRPGGWVEKE
TYY
Sequence length 1023
Interactions View interactions
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
130
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Aldosterone-producing adrenal cortex adenoma Pathogenic rs724160008, rs11540945, rs724160010 RCV000149850
RCV000149851
RCV000149853
Charcot-Marie-Tooth disease type 2A2 Pathogenic; Likely pathogenic rs1553190285, rs1553192091, rs1553192086 RCV003311870
RCV003311871
RCV003311872
RCV003311873
Charcot-Marie-tooth disease, axonal, type 2DD Likely pathogenic; Pathogenic rs1653241392, rs2101045655, rs2101055022, rs1553190285, rs1553192091, rs1553192086, rs1653448255 RCV001331357
RCV001528137
RCV002248975
RCV000656712
RCV000656713
RCV000656714
RCV000656715
RCV001290135
Hypomagnesemia, seizures, and intellectual disability 2 Pathogenic; Likely pathogenic rs1557785499, rs2525834257, rs1557785503, rs781629728, rs1570980551 RCV002251080
RCV004560512
RCV000754797
RCV000754798
RCV000754799
RCV000845571
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Acute myeloid leukemia Benign; Likely benign rs74111870, rs200287013 RCV005922166
RCV005926045
ATP1A1-related disorder Benign; Conflicting classifications of pathogenicity; Likely benign; Uncertain significance rs12079419, rs9567, rs983463553, rs377581743, rs2101037917, rs775571228, rs138556439, rs369189037, rs145603535, rs767480768, rs141378291, rs766790730, rs140751331, rs114525271, rs146071470
View all (9 more)
RCV003975969
RCV003976063
RCV003976156
RCV003968655
RCV003892962
RCV003984128
RCV003948849
RCV003978524
RCV003923454
RCV003893177
RCV003978564
RCV003933375
RCV003951225
RCV003916338
RCV004754867
RCV003950937
RCV004754854
RCV003913549
RCV003404541
RCV003909063
RCV003894486
RCV004755052
RCV003916147
RCV004754650
Cervical cancer Benign; Likely benign rs200117647, rs74111870, rs200995911 RCV005917060
RCV005922167
RCV005935065
Cholangiocarcinoma Likely benign rs200287013 RCV005926047
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
ACTH Secreting Pituitary Adenoma Associate 26743443
Adenoma Associate 34681640
Adrenocortical Adenoma Associate 26765578, 31789380, 34681640
Adrenocortical Carcinoma Associate 34681640
Alcoholic Neuropathy Associate 35110381
Alzheimer Disease Associate 38212844
Anxiety Associate 27487491
Anxiety Disorders Associate 27487491
Carcinoma Hepatocellular Associate 20460749, 26334094
Carcinoma Hepatocellular Stimulate 33868261