Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
87
Gene name Gene Name - the full gene name approved by the HGNC.
Actinin alpha 1
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
ACTN1
Synonyms (NCBI Gene) Gene synonyms aliases
BDPLT15
Disease Acronyms (UniProt) Disease acronyms from UniProt database
BDPLT15
Chromosome Chromosome number
14
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
14q24.1|14q22-q24
Summary Summary of gene provided in NCBI Entrez Gene.
Alpha actinins belong to the spectrin gene superfamily which represents a diverse group of cytoskeletal proteins, including the alpha and beta spectrins and dystrophins. Alpha actinin is an actin-binding protein with multiple roles in different cell types
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs372031019 G>A,C,T Likely-pathogenic Coding sequence variant, synonymous variant, missense variant
rs387907345 C>T Likely-pathogenic, pathogenic Coding sequence variant, missense variant
rs387907347 C>T Pathogenic Coding sequence variant, missense variant
rs387907348 C>T Pathogenic Coding sequence variant, missense variant
rs387907349 G>A Likely-pathogenic, pathogenic Coding sequence variant, missense variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT005004 hsa-miR-218-5p Luciferase reporter assay, qRT-PCR 19890957
MIRT016362 hsa-miR-193b-3p Proteomics 21512034
MIRT023743 hsa-miR-1-3p Proteomics;Microarray 18668037
MIRT051157 hsa-miR-16-5p CLASH 23622248
MIRT039867 hsa-miR-615-3p CLASH 23622248
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0001725 Component Stress fiber IDA 11223950
GO:0001726 Component Ruffle IDA 11223950
GO:0002576 Process Platelet degranulation TAS
GO:0003725 Function Double-stranded RNA binding IDA 21266579
GO:0005178 Function Integrin binding IDA 7983147
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
102575 163 ENSG00000072110
Protein
UniProt ID P12814
Protein name Alpha-actinin-1 (Alpha-actinin cytoskeletal isoform) (F-actin cross-linking protein) (Non-muscle alpha-actinin-1)
Protein function F-actin cross-linking protein which is thought to anchor actin to a variety of intracellular structures. Association with IGSF8 regulates the immune synapse formation and is required for efficient T-cell activation (PubMed:22689882). {ECO:000026
PDB 2EYI , 2EYN , 2N8Y , 2N8Z
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00307 CH 31 136 Calponin homology (CH) domain Domain
PF00307 CH 144 251 Calponin homology (CH) domain Domain
PF00435 Spectrin 274 384 Spectrin repeat Domain
PF00435 Spectrin 394 499 Spectrin repeat Domain
PF00435 Spectrin 509 620 Spectrin repeat Domain
PF00435 Spectrin 630 733 Spectrin repeat Domain
PF08726 EFhand_Ca_insen 822 888 Ca2+ insensitive EF hand Domain
Sequence
MDHYDSQQTNDYMQPEEDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFR
DGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNV
KMTLGMIWTIILRFAI
QDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFC
ALIHRHRPELIDYGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMT
YVSSFYHAFSG
AQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENR
VPENTMHAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGRM
VSDINNAWGCLEQVEKGYEEWLLN
EIRRLERLDHLAEKFRQKASIHEAWTDGKEAMLRQK
DYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKIC
DQWDNLGALTQKRREALER
TEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHT
IEEIQGLTTAHEQFKATLPDADKERLAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEI
NGKWDHVRQLVPRRDQALTE
EHARQQHNERLRKQFGAQANVIGPWIQTKMEEIGRISIEM
HGTLEDQLSHLRQYEKSIVNYKPKIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGWEQL
LTTIARTINEVEN
QILTRDAKGISQEQMNEFRASFNHFDRDHSGTLGPEEFKACLISLGY
DIGNDPQGEAEFARIMSIVDPNRLGVVTFQAFIDFMSRETADTDTADQVMASFKILAGDK
NYITMDELRRELPPDQAEYCIARMAPYTGPDSVPGALDYMSFSTALYG
ESDL
Sequence length 892
Interactions View interactions
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Unknown
Disease term Disease name Evidence References Source
Platelet-type bleeding disorder platelet-type bleeding disorder 15 GenCC
Macrothrombocytopenia autosomal dominant macrothrombocytopenia GenCC
Diabetes Diabetes GWAS
Restless Legs Syndrome Restless Legs Syndrome GWAS
Associations from Text Mining
Disease Name Relationship Type References
Alzheimer Disease Associate 22982105, 31755389
Antiphospholipid Syndrome Associate 17599767
Aortic Coarctation Associate 34425910
Arthritis Rheumatoid Associate 25636958, 34781416, 37426641
Astrocytoma Associate 38307919
Blood Coagulation Disorders Associate 38575196
Bowen's Disease Associate 36085041
Breast Neoplasms Associate 29742177, 34546849
Burns Associate 25844669
Carcinogenesis Associate 34546849