Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene SNPs Other IDs
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	34
Gene name Gene Name - the full gene name approved by the HGNC.	Acyl-CoA dehydrogenase medium chain
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	ACADM
Synonyms (NCBI Gene) Gene synonyms aliases	ACAD1, MCAD, MCADH
Disease Acronyms (UniProt) Disease acronyms from UniProt database	MCAD
Chromosome Chromosome number	1
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	1p31.1
Summary Summary of gene provided in NCBI Entrez Gene.	This gene encodes the medium-chain specific (C4 to C12 straight chain) acyl-Coenzyme A dehydrogenase. The homotetramer enzyme catalyzes the initial step of the mitochondrial fatty acid beta-oxidation pathway. Defects in this gene cause medium-chain acyl-C

Show/Hide all(118)

SNP ID	Visualize variation	Clinical significance	Consequence
rs74090726	A>C	Benign, benign-likely-benign, risk-factor	Synonymous variant, coding sequence variant, intron variant
rs77931234	A>C,G	Conflicting-interpretations-of-pathogenicity, pathogenic	Missense variant, coding sequence variant
rs113887538	G>A,T	Likely-pathogenic	Intron variant, splice donor variant
rs121434274	G>A	Pathogenic-likely-pathogenic, pathogenic	Missense variant, coding sequence variant
rs121434275	T>C	Pathogenic	Missense variant, coding sequence variant
rs121434276	T>C	Pathogenic	Missense variant, coding sequence variant
rs121434277	G>A,T	Conflicting-interpretations-of-pathogenicity, pathogenic	Missense variant, intron variant, coding sequence variant
rs121434278	G>A	Pathogenic-likely-pathogenic, pathogenic	Missense variant, coding sequence variant
rs121434279	A>G	Pathogenic	Missense variant, coding sequence variant
rs121434280	T>C	Pathogenic-likely-pathogenic, conflicting-interpretations-of-pathogenicity	5 prime UTR variant, missense variant, coding sequence variant
rs121434281	C>T	Likely-pathogenic, pathogenic-likely-pathogenic	Missense variant, coding sequence variant
rs121434282	G>C	Pathogenic	Missense variant, coding sequence variant
rs121434283	C>T	Conflicting-interpretations-of-pathogenicity, pathogenic	Missense variant, intron variant, coding sequence variant
rs138098371	C>T	Conflicting-interpretations-of-pathogenicity, uncertain-significance, likely-benign	Synonymous variant, coding sequence variant
rs143911981	C>T	Conflicting-interpretations-of-pathogenicity	3 prime UTR variant
rs147559466	G>A	Uncertain-significance, conflicting-interpretations-of-pathogenicity	Missense variant, 5 prime UTR variant, coding sequence variant
rs148207467	C>A,T	Likely-pathogenic, pathogenic	Stop gained, synonymous variant, coding sequence variant
rs148260275	T>C	Pathogenic-likely-pathogenic	Splice donor variant
rs200754053	G>A,T	Uncertain-significance, likely-pathogenic	Missense variant, coding sequence variant, 5 prime UTR variant
rs201375579	A>G	Pathogenic-likely-pathogenic	Missense variant, coding sequence variant
rs387906297	TTAG>-	Pathogenic	Coding sequence variant, frameshift variant
rs398123072	C>G,T	Pathogenic	Coding sequence variant, 5 prime UTR variant, missense variant
rs398123073	T>C,G	Pathogenic	Splice donor variant
rs398123074	T>C	Pathogenic	Coding sequence variant, 5 prime UTR variant, missense variant
rs398123075	G>A,C,T	Pathogenic, likely-pathogenic, uncertain-significance	Coding sequence variant, 5 prime UTR variant, missense variant
rs745844469	A>C	Uncertain-significance, likely-pathogenic	Coding sequence variant, missense variant, 5 prime UTR variant
rs746136472	T>C	Uncertain-significance, likely-pathogenic	Coding sequence variant, missense variant, intron variant
rs747268471	G>A	Pathogenic-likely-pathogenic, uncertain-significance	Coding sequence variant, missense variant
rs747610156	G>-	Pathogenic-likely-pathogenic	Coding sequence variant, frameshift variant
rs748110745	G>T	Likely-pathogenic	Stop gained, coding sequence variant
rs749529577	T>-	Likely-pathogenic	Frameshift variant, coding sequence variant, intron variant
rs753928772	C>A,T	Uncertain-significance, pathogenic	Synonymous variant, coding sequence variant, stop gained
rs754359356	T>A,C	Conflicting-interpretations-of-pathogenicity	5 prime UTR variant, coding sequence variant, synonymous variant, missense variant
rs754833969	T>A,C	Pathogenic-likely-pathogenic	5 prime UTR variant, coding sequence variant, synonymous variant, stop gained
rs757434857	A>G	Conflicting-interpretations-of-pathogenicity, likely-pathogenic	Missense variant, coding sequence variant, 5 prime UTR variant
rs758753966	A>C	Pathogenic	Splice acceptor variant
rs759158371	T>A	Pathogenic-likely-pathogenic	Coding sequence variant, missense variant
rs759254037	G>A,T	Conflicting-interpretations-of-pathogenicity, uncertain-significance	Intron variant
rs760892123	T>C	Conflicting-interpretations-of-pathogenicity, uncertain-significance	Coding sequence variant, missense variant
rs761317029	A>G	Likely-pathogenic	Splice acceptor variant
rs762114560	C>T	Pathogenic-likely-pathogenic, pathogenic	5 prime UTR variant, coding sequence variant, missense variant
rs764942250	T>G	Conflicting-interpretations-of-pathogenicity	Intron variant
rs765793260	T>G	Pathogenic	Intron variant
rs766140986	C>T	Likely-pathogenic	Coding sequence variant, missense variant
rs766173642	CA>-,CACA	Likely-pathogenic	Frameshift variant, 5 prime UTR variant, coding sequence variant
rs768884003	G>A	Conflicting-interpretations-of-pathogenicity	Missense variant, coding sequence variant
rs769331400	G>A	Pathogenic	Splice donor variant
rs773677327	A>G	Likely-pathogenic, conflicting-interpretations-of-pathogenicity	Missense variant, coding sequence variant
rs777998984	G>-	Pathogenic	Coding sequence variant, frameshift variant, intron variant
rs778906552	G>A	Pathogenic, pathogenic-likely-pathogenic	Coding sequence variant, intron variant, missense variant
rs779759347	G>C	Likely-pathogenic, pathogenic-likely-pathogenic	Coding sequence variant, missense variant
rs780504551	A>T	Pathogenic-likely-pathogenic	Missense variant, coding sequence variant
rs786204424	G>-	Pathogenic, conflicting-interpretations-of-pathogenicity	Splice donor variant, coding sequence variant, intron variant
rs786204566	->T	Pathogenic	Coding sequence variant, frameshift variant, 5 prime UTR variant
rs786204631	T>C	Likely-pathogenic	Missense variant, coding sequence variant
rs786204642	CTGA>-	Pathogenic	Coding sequence variant, intron variant, frameshift variant
rs794727694	G>C	Pathogenic	Splice acceptor variant, intron variant
rs796051896	C>G,T	Pathogenic, uncertain-significance	Missense variant, coding sequence variant, stop gained
rs796051901	AG>-	Pathogenic	Coding sequence variant, frameshift variant
rs864621963	GGATGT>-	Pathogenic	Coding sequence variant, intron variant, inframe deletion
rs866388216	G>A	Likely-pathogenic	Splice donor variant
rs875989854	C>G,T	Conflicting-interpretations-of-pathogenicity	Missense variant, coding sequence variant, intron variant
rs875989857	AAG>-	Likely-pathogenic, uncertain-significance	Coding sequence variant, intron variant, inframe deletion
rs875989859	G>A	Pathogenic-likely-pathogenic	Missense variant, coding sequence variant, intron variant
rs875989860	AA>-	Pathogenic-likely-pathogenic	Coding sequence variant, frameshift variant
rs875989864	->T	Pathogenic-likely-pathogenic	Coding sequence variant, frameshift variant
rs875989867	A>G	Pathogenic	Missense variant, coding sequence variant
rs875989869	G>A	Pathogenic	Splice acceptor variant
rs875989872	GCAATGGGAGCTT>-	Pathogenic-likely-pathogenic	Coding sequence variant, frameshift variant
rs875989873	ATTA>-	Pathogenic	Coding sequence variant, intron variant, frameshift variant
rs875989874	->TAGAATGAGTTAC	Pathogenic	Coding sequence variant, stop gained, inframe indel
rs875989875	->GATTTAG	Pathogenic-likely-pathogenic	Coding sequence variant, intron variant, stop gained, inframe indel
rs875989876	T>C	Pathogenic	Missense variant, coding sequence variant, intron variant
rs875989877	->T	Pathogenic	Coding sequence variant, frameshift variant
rs878853106	G>A	Pathogenic	Splice donor variant
rs879234543	A>C,T	Likely-pathogenic	Splice acceptor variant
rs886042087	AAA>-,AA	Pathogenic, uncertain-significance	Frameshift variant, inframe deletion, intron variant, coding sequence variant
rs941714381	G>A	Likely-pathogenic	Splice acceptor variant
rs1057516278	->G	Pathogenic	Coding sequence variant, frameshift variant
rs1057516463	C>-	Likely-pathogenic	Coding sequence variant, frameshift variant
rs1057516480	T>-	Likely-pathogenic	5 prime UTR variant, coding sequence variant, frameshift variant
rs1057516485	C>A,T	Likely-pathogenic	Stop gained, missense variant, coding sequence variant
rs1057516564	C>T	Likely-pathogenic	Stop gained, coding sequence variant
rs1057516801	G>T	Likely-pathogenic	Splice donor variant
rs1057516983	G>A,T	Likely-pathogenic, pathogenic	Splice donor variant, intron variant
rs1057517103	AT>-	Likely-pathogenic	Coding sequence variant, frameshift variant
rs1057517179	AG>-	Likely-pathogenic	5 prime UTR variant, coding sequence variant, frameshift variant
rs1057517356	AGTA>-	Pathogenic	Intron variant, coding sequence variant, frameshift variant
rs1057517411	A>-	Likely-pathogenic	Coding sequence variant, frameshift variant
rs1057518408	A>G	Likely-pathogenic	Missense variant, coding sequence variant
rs1057518677	A>G	Likely-pathogenic	Intron variant, splice acceptor variant
rs1057520214	A>C	Likely-pathogenic, uncertain-significance	Missense variant, 5 prime UTR variant, coding sequence variant
rs1057521114	A>G	Likely-pathogenic	Missense variant, 5 prime UTR variant, coding sequence variant
rs1215335509	G>A,T	Likely-pathogenic	Coding sequence variant, missense variant, stop gained
rs1225471006	->TAGAATGAGTTAC	Pathogenic-likely-pathogenic, pathogenic	Stop gained, coding sequence variant
rs1227800781	A>G	Pathogenic	Coding sequence variant, missense variant
rs1319192670	T>-	Pathogenic	Frameshift variant, coding sequence variant, 5 prime UTR variant
rs1325949559	C>-	Pathogenic	Intron variant, frameshift variant, coding sequence variant
rs1348176225	C>A,G	Likely-pathogenic	Coding sequence variant, missense variant
rs1462472677	A>G,T	Likely-pathogenic	Missense variant, coding sequence variant
rs1553122996	T>G	Likely-pathogenic	Splice donor variant
rs1553123071	->G	Likely-pathogenic, pathogenic	Intron variant, frameshift variant, coding sequence variant
rs1553123857	A>C	Likely-pathogenic	Splice acceptor variant
rs1553123871	GA>-	Pathogenic	Coding sequence variant, 5 prime UTR variant, stop gained
rs1553125211	A>C	Likely-pathogenic	Splice acceptor variant
rs1553125264	GCT>CC	Likely-pathogenic	Frameshift variant, coding sequence variant
rs1553127172	TTGAACTAGCTAGAATGAGTTA>-	Pathogenic	Frameshift variant, coding sequence variant
rs1553127216	A>C	Pathogenic	Coding sequence variant, missense variant
rs1553127378	G>C	Likely-pathogenic	Splice acceptor variant
rs1557446524	G>T	Likely-pathogenic	Intron variant, stop gained, coding sequence variant
rs1557457623	GTGACGGAGC>TTTAA	Pathogenic	Stop gained, coding sequence variant, inframe indel
rs1557458562	C>-	Pathogenic	Coding sequence variant, frameshift variant
rs1557466604	A>T	Likely-pathogenic	Coding sequence variant, missense variant
rs1570851702	C>T	Pathogenic	Coding sequence variant, stop gained, intron variant
rs1570861829	G>A	Pathogenic	Splice acceptor variant
rs1570866192	ATT>-	Pathogenic	Coding sequence variant, inframe deletion, intron variant
rs1570876467	T>C	Likely-pathogenic	Coding sequence variant, 5 prime UTR variant, missense variant
rs1570891615	G>T	Likely-pathogenic	Coding sequence variant, stop gained

Show/Hide all(70)

miRTarBase ID	miRNA	Experiments	Reference
MIRT004953	hsa-miR-98-5p	qRT-PCR	17942906
MIRT021871	hsa-miR-128-3p	Microarray	17612493
MIRT028946	hsa-miR-26b-5p	Microarray	19088304
MIRT755551	hsa-miR-16-2-3p	Luciferase reporter assay, Western blotting, qRT-PCR	38336726
MIRT761447	hsa-miR-106a	CLIP-seq
MIRT761448	hsa-miR-106b	CLIP-seq
MIRT761449	hsa-miR-1297	CLIP-seq
MIRT761450	hsa-miR-1305	CLIP-seq
MIRT761451	hsa-miR-154	CLIP-seq
MIRT761452	hsa-miR-17	CLIP-seq
MIRT761453	hsa-miR-20a	CLIP-seq
MIRT761454	hsa-miR-20b	CLIP-seq
MIRT761455	hsa-miR-26a	CLIP-seq
MIRT761456	hsa-miR-26b	CLIP-seq
MIRT761457	hsa-miR-3609	CLIP-seq
MIRT761458	hsa-miR-3668	CLIP-seq
MIRT761459	hsa-miR-380	CLIP-seq
MIRT761460	hsa-miR-4465	CLIP-seq
MIRT761461	hsa-miR-4703-3p	CLIP-seq
MIRT761462	hsa-miR-4760-3p	CLIP-seq
MIRT761463	hsa-miR-4796-3p	CLIP-seq
MIRT761464	hsa-miR-498	CLIP-seq
MIRT761465	hsa-miR-519d	CLIP-seq
MIRT761466	hsa-miR-548ah	CLIP-seq
MIRT761467	hsa-miR-569	CLIP-seq
MIRT761468	hsa-miR-578	CLIP-seq
MIRT761469	hsa-miR-93	CLIP-seq
MIRT2165774	hsa-miR-590-3p	CLIP-seq
MIRT2383795	hsa-miR-221	CLIP-seq
MIRT2383796	hsa-miR-222	CLIP-seq
MIRT2383797	hsa-miR-323-3p	CLIP-seq
MIRT2383798	hsa-miR-513a-3p	CLIP-seq
MIRT2383799	hsa-miR-544	CLIP-seq
MIRT2383800	hsa-miR-548v	CLIP-seq
MIRT2468368	hsa-miR-144	CLIP-seq
MIRT2468369	hsa-miR-194	CLIP-seq
MIRT2468370	hsa-miR-338-5p	CLIP-seq
MIRT2468371	hsa-miR-3671	CLIP-seq
MIRT2468372	hsa-miR-4263	CLIP-seq
MIRT2468373	hsa-miR-4272	CLIP-seq
MIRT2468374	hsa-miR-4495	CLIP-seq
MIRT2468375	hsa-miR-4635	CLIP-seq
MIRT2468376	hsa-miR-4645-3p	CLIP-seq
MIRT2468377	hsa-miR-4652-3p	CLIP-seq
MIRT2468378	hsa-miR-4799-5p	CLIP-seq
MIRT2383798	hsa-miR-513a-3p	CLIP-seq
MIRT2468379	hsa-miR-576-5p	CLIP-seq
MIRT2468380	hsa-miR-607	CLIP-seq
MIRT2468381	hsa-miR-616	CLIP-seq
MIRT2468368	hsa-miR-144	CLIP-seq
MIRT2468369	hsa-miR-194	CLIP-seq
MIRT2674210	hsa-miR-3163	CLIP-seq
MIRT2468370	hsa-miR-338-5p	CLIP-seq
MIRT2468371	hsa-miR-3671	CLIP-seq
MIRT2468372	hsa-miR-4263	CLIP-seq
MIRT2468373	hsa-miR-4272	CLIP-seq
MIRT2674211	hsa-miR-4282	CLIP-seq
MIRT2468374	hsa-miR-4495	CLIP-seq
MIRT2468375	hsa-miR-4635	CLIP-seq
MIRT2468376	hsa-miR-4645-3p	CLIP-seq
MIRT2468377	hsa-miR-4652-3p	CLIP-seq
MIRT2468378	hsa-miR-4799-5p	CLIP-seq
MIRT2674212	hsa-miR-494	CLIP-seq
MIRT2383798	hsa-miR-513a-3p	CLIP-seq
MIRT2674213	hsa-miR-520d-5p	CLIP-seq
MIRT2674214	hsa-miR-524-5p	CLIP-seq
MIRT2468379	hsa-miR-576-5p	CLIP-seq
MIRT2674215	hsa-miR-581	CLIP-seq
MIRT2468380	hsa-miR-607	CLIP-seq
MIRT2468381	hsa-miR-616	CLIP-seq

Show/Hide all(24)

GO ID	Ontology	Definition	Evidence	Reference
GO:0003995	Function	Acyl-CoA dehydrogenase activity	IDA	19224950
GO:0003995	Function	Acyl-CoA dehydrogenase activity	IMP	2393404
GO:0005634	Component	Nucleus	HDA	21630459
GO:0005739	Component	Mitochondrion	IBA	21873635
GO:0005739	Component	Mitochondrion	IDA
GO:0005759	Component	Mitochondrial matrix	IDA	16020546
GO:0005759	Component	Mitochondrial matrix	TAS
GO:0006635	Process	Fatty acid beta-oxidation	IBA	21873635
GO:0006635	Process	Fatty acid beta-oxidation	IMP	2393404
GO:0006635	Process	Fatty acid beta-oxidation	TAS
GO:0019216	Process	Regulation of lipid metabolic process	TAS
GO:0019254	Process	Carnitine metabolic process, CoA-linked	IMP	16972171
GO:0030424	Component	Axon	IDA	21237683
GO:0031966	Component	Mitochondrial membrane	IDA	16020546
GO:0033539	Process	Fatty acid beta-oxidation using acyl-CoA dehydrogenase	IDA	1902818, 3597357, 19224950, 25416781
GO:0033539	Process	Fatty acid beta-oxidation using acyl-CoA dehydrogenase	IMP	16972171
GO:0042802	Function	Identical protein binding	IDA	19224950
GO:0045329	Process	Carnitine biosynthetic process	IMP	16972171
GO:0050660	Function	Flavin adenine dinucleotide binding	IEA
GO:0051791	Process	Medium-chain fatty acid metabolic process	IDA	1970566
GO:0051793	Process	Medium-chain fatty acid catabolic process	IBA	21873635
GO:0051793	Process	Medium-chain fatty acid catabolic process	IDA	1970566
GO:0070991	Function	Medium-chain-acyl-CoA dehydrogenase activity	IBA	21873635
GO:0070991	Function	Medium-chain-acyl-CoA dehydrogenase activity	IDA	1902818, 1970566, 3597357, 19224950

MIM	HGNC	e!Ensembl
607008	89	ENSG00000117054

Protein

UniProt ID

P11310

Protein name

Medium-chain specific acyl-CoA dehydrogenase, mitochondrial (MCAD) (EC 1.3.8.7) (Medium chain acyl-CoA dehydrogenase) (MCADH)

Protein function

Medium-chain specific acyl-CoA dehydrogenase is one of the acyl-CoA dehydrogenases that catalyze the first step of mitochondrial fatty acid beta-oxidation, an aerobic process breaking down fatty acids into acetyl-CoA and allowing the production

PDB

1EGC , 1EGD , 1EGE , 1T9G , 2A1T , 4P13 , 8SGP

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF02771	Acyl-CoA_dh_N	42 → 152	Acyl-CoA dehydrogenase, N-terminal domain	Domain
PF02770	Acyl-CoA_dh_M	157 → 255	Acyl-CoA dehydrogenase, middle domain	Domain
PF00441	Acyl-CoA_dh_1	267 → 416	Acyl-CoA dehydrogenase, C-terminal domain	Domain

Sequence

MAAGFGRCCRVLRSISRFHWRSQHTKANRQREPGLGFSFEFTEQQKEFQATARKFAREEI
IPVAAEYDKTGEYPVPLIRRAWELGLMNTHIPENCGGLGLGTFDACLISEELAYGCTGVQ
TAIEGNSLGQMPIIIAGNDQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKG
DEYIINGQKMWITNGGKANWYFLLARSDPDPKAPANKAFTGFIVEADTPGIQIGRKELNM
GQRCSDTRGIVFEDVKVPKENVLIGDGAGFKVAMGAFDKTRPVVAAGAVGLAQRALDEAT
KYALERKTFGKLLVEHQAISFMLAEMAMKVELARMSYQRAAWEVDSGRRNTYYASIAKAF
AGDIANQLATDAVQILGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIVAREHIDKYK
N

Sequence length

421

Interactions

View interactions

ACADM (acyl-CoA dehydrogenase medium chain)