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TLR4 (toll like receptor 4)

Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
7099
Gene nameGene Name - the full gene name approved by the HGNC.
Toll like receptor 4
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
TLR4
SynonymsGene synonyms aliases
ARMD10, CD284, TLR-4, TOLL
ChromosomeChromosome number
9
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
9q33.1
SummarySummary of gene provided in NCBI Entrez Gene.
The protein encoded by this gene is a member of the Toll-like receptor (TLR) family which plays a fundamental role in pathogen recognition and activation of innate immunity. TLRs are highly conserved from Drosophila to humans and share structural and func
miRNAmiRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT003050 hsa-let-7i-5p Luciferase reporter assay, qRT-PCR, Western blot 17660297
MIRT003050 hsa-let-7i-5p Luciferase reporter assay, qRT-PCR, Western blot 17660297
MIRT006530 hsa-miR-146a-5p ELISA, Luciferase reporter assay, Microarray, qRT-PCR, Western blot 21329689
MIRT006530 hsa-miR-146a-5p ELISA, Luciferase reporter assay, Microarray, qRT-PCR, Western blot 21329689
MIRT006530 hsa-miR-146a-5p ELISA, Luciferase reporter assay, Microarray, qRT-PCR, Western blot 21329689
Transcription factors
Transcription factor Regulation Reference
IRF3 Unknown 22208359
IRF8 Unknown 10734131
SPI1 Activation 16785240;20956019
SPI1 Unknown 10734131
STAT6 Repression 16433852
Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000187 Process Activation of MAPK activity ISS
GO:0001530 Function Lipopolysaccharide binding IBA 21873635
GO:0001530 Function Lipopolysaccharide binding IMP 16514062
GO:0001530 Function Lipopolysaccharide binding NAS 10835634
GO:0001540 Function Amyloid-beta binding IC 20037584
Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM
HGNC
e!Ensembl
Protein
UniProt ID O00206
Protein name Toll-like receptor 4 (hToll) (CD antigen CD284)
Protein function Transmembrane receptor that functions as a pattern recognition receptor recognizing pathogen- and damage-associated molecular patterns (PAMPs and DAMPs) to induce innate immune responses via downstream signaling pathways (PubMed:10835634, PubMed
PDB 2Z62 , 2Z63 , 2Z65 , 2Z66 , 3FXI , 3UL7 , 3UL8 , 3UL9 , 3ULA , 4G8A , 5NAM , 5NAO , 8WO1 , 8WTA
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF13855 LRR_8
55 114
Leucine rich repeat
Repeat
PF13855 LRR_8
78 138
Leucine rich repeat
Repeat
PF13855 LRR_8
126 187
Leucine rich repeat
Repeat
PF13855 LRR_8
150 207
Leucine rich repeat
Repeat
PF13855 LRR_8
447 508
Leucine rich repeat
Repeat
PF13855 LRR_8
485 532
Leucine rich repeat
Repeat
PF13855 LRR_8
496 556
Leucine rich repeat
Repeat
PF01582 TIR
674 839
TIR domain
Family
Sequence
MMSASRLAGTLIPAMAFLSCVRPESWEPCVEVVPNITYQCMELNFYKIPDNLPFSTKNLD
LSFNPLRHLGSYSFFSF
PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALG
AFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHL
DLSSNKI
QSIYCTDLRVLHQMPLLNLS
LDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSL
NVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDI
IDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTS
NKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLG
LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAG
NSFQ
ENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPY
KCLNSLQVLDYSLNHI
MTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQL
LVEVERMECATPSDKQGMPVLSLNITCQMNKTIIGVSVLSVLVVSVVAVLVYKFYFHLML
LAGCIKYGRGENIYDAFVIYSSQDEDWVRNELVKNLEEGVPPFQLCLHYRDFIPGVAIAA
NIIHEGFHKSRKVIVVVSQHFIQSRWCIFEYEIAQTWQFLSSRAGIIFIVLQKVEKTLLR
QQVELYRLLSRNTYLEWEDSVLGRHIFWRRLRKALLDGKSWNPEGTVGTGCNWQEATSI
Sequence length 839
Interactions View interactions

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