TGFBR2 (transforming growth factor beta receptor 2)
|
Gene
|
Entrez ID
Entrez Gene ID - the GENE ID in NCBI Gene database.
|
7048 |
Gene nameGene Name - the full gene name approved by the HGNC.
|
Transforming growth factor beta receptor 2 |
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
|
TGFBR2 |
SynonymsGene synonyms aliases
|
AAT3, FAA3, LDS1B, LDS2, LDS2B, MFS2, RIIC, TAAD2, TBR-ii, TBRII, TGFR-2, TGFbeta-RII |
ChromosomeChromosome number
|
3 |
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
|
3p24.1 |
SummarySummary of gene provided in NCBI Entrez Gene.
|
The protein encoded by this gene is a transmembrane protein that has a protein kinase domain, forms a heterodimeric complex with TGF-beta receptor type-1, and binds TGF-beta. This receptor/ligand complex phosphorylates proteins, which then enter the nucleus and regulate the transcription of genes related to cell proliferation, cell cycle arrest, wound healing, immunosuppression, and tumorigenesis. Mutations in this gene have been associated with Marfan Syndrome, Loeys-Deitz Aortic Aneurysm Syndrome, and the development of various types of tumors. Alternatively spliced transcript variants encoding different isoforms have been characterized. [provided by RefSeq, Aug 2017] |
SNPsSNP information provided by dbSNP.
|
SNP ID |
Visualize variation |
Clinical significance |
Consequence |
rs28934568 |
T>C |
Pathogenic |
Missense variant, coding sequence variant |
rs34833812 |
C>T |
Conflicting-interpretations-of-pathogenicity, pathogenic, benign-likely-benign, benign, likely-pathogenic, likely-benign |
Coding sequence variant, missense variant |
rs35719192 |
G>A |
Conflicting-interpretations-of-pathogenicity, likely-benign, benign-likely-benign |
Coding sequence variant, missense variant |
rs35766612 |
G>A,T |
Conflicting-interpretations-of-pathogenicity, uncertain-significance, benign-likely-benign, benign, likely-benign, not-provided |
Coding sequence variant, missense variant |
rs61732532 |
G>A |
Conflicting-interpretations-of-pathogenicity, likely-benign |
Intron variant, coding sequence variant, missense variant, genic upstream transcript variant |
rs79375991 |
A>-,AA |
Uncertain-significance, benign, likely-pathogenic |
Frameshift variant, coding sequence variant |
rs104893807 |
C>G,T |
Pathogenic |
Missense variant, coding sequence variant |
rs104893809 |
C>T |
Pathogenic |
Missense variant, coding sequence variant |
rs104893810 |
C>T |
Pathogenic |
Missense variant, coding sequence variant |
rs104893811 |
C>T |
Pathogenic |
Missense variant, coding sequence variant |
rs104893812 |
T>A,G |
Pathogenic, uncertain-significance |
Missense variant, coding sequence variant |
rs104893813 |
G>A,C,T |
Pathogenic, uncertain-significance |
Missense variant, coding sequence variant |
rs104893814 |
G>T |
Pathogenic |
Missense variant, coding sequence variant |
rs104893815 |
G>A |
Pathogenic |
Missense variant, coding sequence variant |
rs104893816 |
G>A,T |
Pathogenic |
Missense variant, coding sequence variant |
rs104893817 |
A>C,G |
Pathogenic, uncertain-significance |
Missense variant, coding sequence variant |
rs104893818 |
C>T |
Pathogenic |
Missense variant, coding sequence variant |
rs104893819 |
C>G,T |
Pathogenic |
Stop gained, missense variant, coding sequence variant |
rs112215250 |
T>A |
Benign, conflicting-interpretations-of-pathogenicity, benign-likely-benign, likely-benign |
Missense variant, coding sequence variant |
rs121918714 |
G>C |
Pathogenic, uncertain-significance |
Missense variant, coding sequence variant |
rs121918715 |
G>A |
Pathogenic |
Synonymous variant, coding sequence variant |
rs138262219 |
C>A |
Conflicting-interpretations-of-pathogenicity, uncertain-significance |
Genic upstream transcript variant, missense variant, intron variant, coding sequence variant |
rs150022335 |
C>T |
Conflicting-interpretations-of-pathogenicity, uncertain-significance |
Coding sequence variant, missense variant |
rs193922660 |
A>G |
Likely-pathogenic, uncertain-significance |
Coding sequence variant, missense variant |
rs193922664 |
T>C |
Likely-pathogenic |
Coding sequence variant, missense variant |
rs193922665 |
C>A,T |
Likely-pathogenic |
Coding sequence variant, missense variant |
rs199660234 |
C>G,T |
Pathogenic, likely-pathogenic |
Coding sequence variant, missense variant |
rs200630803 |
A>C,G |
Conflicting-interpretations-of-pathogenicity, likely-benign |
Intron variant |
rs377499122 |
G>A,T |
Conflicting-interpretations-of-pathogenicity, likely-benign |
Intron variant |
rs397516840 |
G>T |
Likely-pathogenic |
Coding sequence variant, stop gained |
rs587776769 |
->TG |
Pathogenic |
Coding sequence variant, frameshift variant |
rs587776770 |
A>G |
Pathogenic |
Splice acceptor variant |
rs587782979 |
G>A |
Likely-pathogenic |
Missense variant, coding sequence variant |
rs727503475 |
G>A,T |
Pathogenic, likely-pathogenic |
Splice donor variant |
rs727503476 |
C>T |
Likely-pathogenic, uncertain-significance |
Missense variant, coding sequence variant |
rs727503477 |
G>A |
Likely-pathogenic |
Missense variant, coding sequence variant |
rs727504292 |
G>A,C |
Pathogenic |
Missense variant, coding sequence variant |
rs727504406 |
C>T |
Conflicting-interpretations-of-pathogenicity, likely-benign, uncertain-significance |
Missense variant, coding sequence variant |
rs727504421 |
G>A,T |
Pathogenic, likely-pathogenic, uncertain-significance |
Missense variant, coding sequence variant |
rs730880224 |
C>A,T |
Pathogenic, likely-pathogenic |
Missense variant, coding sequence variant |
rs768385200 |
A>T |
Conflicting-interpretations-of-pathogenicity, uncertain-significance, likely-benign |
Coding sequence variant, missense variant |
rs768508812 |
C>G,T |
Conflicting-interpretations-of-pathogenicity, uncertain-significance |
Coding sequence variant, synonymous variant |
rs779131465 |
A>G |
Pathogenic |
Splice acceptor variant |
rs863223841 |
T>A |
Likely-pathogenic |
Missense variant, coding sequence variant |
rs863223842 |
A>G |
Likely-pathogenic |
Missense variant, coding sequence variant |
rs863223843 |
C>T |
Likely-pathogenic |
Missense variant, coding sequence variant |
rs863223844 |
G>A |
Likely-pathogenic |
Missense variant, coding sequence variant |
rs863223845 |
G>A,T |
Uncertain-significance, likely-pathogenic |
Missense variant, coding sequence variant |
rs863223847 |
G>T |
Likely-pathogenic |
Missense variant, coding sequence variant |
rs863223848 |
T>A |
Likely-pathogenic |
Missense variant, coding sequence variant |
rs863223849 |
G>A |
Pathogenic |
Missense variant, coding sequence variant |
rs863223850 |
C>T |
Pathogenic |
Missense variant, coding sequence variant |
rs863223851 |
T>G |
Likely-pathogenic |
Missense variant, coding sequence variant |
rs863223852 |
C>A,T |
Pathogenic, uncertain-significance |
Stop gained, coding sequence variant, synonymous variant |
rs863223853 |
G>T |
Conflicting-interpretations-of-pathogenicity, uncertain-significance |
Missense variant, coding sequence variant |
rs863223854 |
G>A |
Conflicting-interpretations-of-pathogenicity, uncertain-significance |
Missense variant, coding sequence variant |
rs863223857 |
A>G |
Likely-pathogenic, uncertain-significance |
Missense variant, coding sequence variant |
rs863224935 |
T>A,G |
Likely-pathogenic, pathogenic, uncertain-significance |
Missense variant, coding sequence variant |
rs869025537 |
G>A |
Likely-pathogenic |
Missense variant, coding sequence variant |
rs876658120 |
ACGTTGACTGAG>- |
Likely-pathogenic |
Inframe deletion, coding sequence variant |
rs878854610 |
A>G,T |
Pathogenic |
Missense variant, coding sequence variant |
rs878854611 |
T>- |
Likely-pathogenic |
Frameshift variant, coding sequence variant |
rs886038787 |
A>G |
Pathogenic |
Missense variant, coding sequence variant |
rs886038794 |
G>T |
Pathogenic |
Missense variant, coding sequence variant |
rs886038847 |
A>T |
Pathogenic |
Missense variant, coding sequence variant |
rs886039106 |
G>A |
Pathogenic |
Missense variant, coding sequence variant |
rs886039551 |
G>A |
Pathogenic, likely-pathogenic |
Missense variant, coding sequence variant |
rs1057524810 |
G>A |
Likely-pathogenic |
Missense variant, coding sequence variant |
rs1060501984 |
C>T |
Likely-pathogenic |
Stop gained, coding sequence variant |
rs1553630221 |
G>C |
Likely-pathogenic |
Missense variant, coding sequence variant |
rs1553630426 |
G>T |
Likely-pathogenic |
Missense variant, coding sequence variant |
rs1553630457 |
T>C |
Pathogenic |
Missense variant, coding sequence variant |
rs1553631693 |
G>A |
Pathogenic |
Splice acceptor variant |
rs1559466824 |
G>A |
Likely-pathogenic |
Missense variant, coding sequence variant |
rs1559472349 |
CT>- |
Likely-pathogenic |
Frameshift variant, coding sequence variant |
rs1575165272 |
G>A |
Pathogenic |
Stop gained, coding sequence variant |
rs1575166666 |
T>C |
Likely-pathogenic |
Missense variant, coding sequence variant |
|
miRNAmiRNA information provided by mirtarbase database.
|
miRTarBase ID |
miRNA |
Experiments |
Reference |
MIRT001189 |
hsa-miR-21-5p |
qRT-PCR, Western blot |
19906824 |
MIRT001189 |
hsa-miR-21-5p |
qRT-PCR, Luciferase reporter assay, Western blot, Reporter assay |
19816956 |
MIRT001189 |
hsa-miR-21-5p |
Luciferase reporter assay, qRT-PCR, Western blot |
18829576 |
MIRT001189 |
hsa-miR-21-5p |
Luciferase reporter assay, Western blot |
22072622 |
MIRT001189 |
hsa-miR-21-5p |
Microarray |
18591254 |
MIRT001189 |
hsa-miR-21-5p |
Immunofluorescence, Luciferase reporter assay, qRT-PCR, Western blot |
24037531 |
MIRT001189 |
hsa-miR-21-5p |
Luciferase reporter assay |
27388239 |
MIRT001785 |
hsa-miR-20a-5p |
Immunoblot, Luciferase reporter assay, Microarray, qRT-PCR, Western blot |
20940405 |
MIRT001785 |
hsa-miR-20a-5p |
Microarray, qRT-PCR |
19435428 |
MIRT001785 |
hsa-miR-20a-5p |
Luciferase reporter assay, Microarray, Reporter assay |
16461460 |
MIRT001785 |
hsa-miR-20a-5p |
HITS-CLIP |
22473208 |
MIRT001785 |
hsa-miR-20a-5p |
PAR-CLIP |
22012620 |
MIRT001785 |
hsa-miR-20a-5p |
PAR-CLIP |
21572407 |
MIRT001785 |
hsa-miR-20a-5p |
PAR-CLIP |
20371350 |
MIRT001785 |
hsa-miR-20a-5p |
Luciferase reporter assay |
27080303 |
MIRT001785 |
hsa-miR-20a-5p |
Immunoblot, Immunohistochemistry, In situ hybridization, Luciferase reporter assay, qRT-PCR |
27508097 |
MIRT001785 |
hsa-miR-20a-5p |
Immunoblot, Immunofluorescence, Luciferase reporter assay, qRT-PCR |
26729221 |
MIRT003272 |
hsa-miR-204-5p |
Luciferase reporter assay |
20056717 |
MIRT003272 |
hsa-miR-204-5p |
Microarray |
21282569 |
MIRT004591 |
hsa-miR-17-5p |
Immunoblot, Luciferase reporter assay, Microarray, qRT-PCR, Western blot |
20940405 |
MIRT004591 |
hsa-miR-17-5p |
HITS-CLIP |
22473208 |
MIRT004591 |
hsa-miR-17-5p |
PAR-CLIP |
22012620 |
MIRT004591 |
hsa-miR-17-5p |
PAR-CLIP |
21572407 |
MIRT004591 |
hsa-miR-17-5p |
PAR-CLIP |
20371350 |
MIRT004591 |
hsa-miR-17-5p |
qRT-PCR, Luciferase reporter assay, Western blot |
25011053 |
MIRT004591 |
hsa-miR-17-5p |
Luciferase reporter assay, Immunohistochemistry, qRT-PCR, Western blot |
27120811 |
MIRT004591 |
hsa-miR-17-5p |
Immunoblot, Immunohistochemistry, In situ hybridization, Luciferase reporter assay, qRT-PCR |
27508097 |
MIRT004592 |
hsa-miR-18a-5p |
Luciferase reporter assay, Microarray |
20940405 |
MIRT004592 |
hsa-miR-18a-5p |
Luciferase reporter assay, qRT-PCR, Western blot |
28131417 |
MIRT004593 |
hsa-miR-19a-3p |
Luciferase reporter assay, Microarray |
20940405 |
MIRT004593 |
hsa-miR-19a-3p |
Luciferase reporter assay |
24220575 |
MIRT004593 |
hsa-miR-19a-3p |
HITS-CLIP |
22473208 |
MIRT004593 |
hsa-miR-19a-3p |
PAR-CLIP |
22012620 |
MIRT004593 |
hsa-miR-19a-3p |
PAR-CLIP |
21572407 |
MIRT004593 |
hsa-miR-19a-3p |
PAR-CLIP |
20371350 |
MIRT004593 |
hsa-miR-19a-3p |
qRT-PCR, Luciferase reporter assay, Western blot |
25443138 |
MIRT004593 |
hsa-miR-19a-3p |
Luciferase reporter assay |
27080303 |
MIRT004593 |
hsa-miR-19a-3p |
Luciferase reporter assay |
27098600 |
MIRT004594 |
hsa-miR-19b-3p |
Microarray, qRT-PCR |
19435428 |
MIRT004594 |
hsa-miR-19b-3p |
Sequencing, PAR-CLIP |
20371350 |
MIRT004594 |
hsa-miR-19b-3p |
HITS-CLIP |
22473208 |
MIRT004594 |
hsa-miR-19b-3p |
PAR-CLIP |
22012620 |
MIRT004594 |
hsa-miR-19b-3p |
PAR-CLIP |
21572407 |
MIRT004594 |
hsa-miR-19b-3p |
Luciferase reporter assay |
27098600 |
MIRT004594 |
hsa-miR-19b-3p |
Luciferase reporter assay, qRT-PCR, Western blot |
28083843 |
MIRT004619 |
hsa-miR-590-5p |
Luciferase reporter assay, qRT-PCR, Western blot |
19398468 |
MIRT004737 |
hsa-miR-92a-3p |
Microarray, qRT-PCR |
19435428 |
MIRT004737 |
hsa-miR-92a-3p |
Luciferase reporter assay, Microarray |
20940405 |
MIRT005930 |
hsa-miR-302b-3p |
Immunocytochemistry, Luciferase reporter assay, Microarray, qRT-PCR, Western blot |
21490602 |
MIRT005931 |
hsa-miR-372-3p |
Immunocytochemistry, Luciferase reporter assay, Microarray, qRT-PCR, Western blot |
21490602 |
MIRT005931 |
hsa-miR-372-3p |
Luciferase reporter assay, qRT-PCR, Western blot |
22020335 |
MIRT006825 |
hsa-miR-106a-5p |
Luciferase reporter assay, qRT-PCR |
22912877 |
MIRT006825 |
hsa-miR-106a-5p |
PAR-CLIP |
22012620 |
MIRT006825 |
hsa-miR-106a-5p |
PAR-CLIP |
21572407 |
MIRT006825 |
hsa-miR-106a-5p |
PAR-CLIP |
20371350 |
MIRT006840 |
hsa-miR-370-3p |
GFP reporter assay, LacZ reporter assay, Luciferase reporter assay, qRT-PCR, Western blot |
21666718 |
MIRT016729 |
hsa-miR-335-5p |
Microarray |
18185580 |
MIRT020143 |
hsa-miR-130b-3p |
Sequencing, PAR-CLIP |
20371350 |
MIRT020143 |
hsa-miR-130b-3p |
PAR-CLIP |
22012620 |
MIRT020143 |
hsa-miR-130b-3p |
PAR-CLIP |
21572407 |
MIRT027974 |
hsa-miR-93-5p |
Sequencing, PAR-CLIP |
20371350 |
MIRT027974 |
hsa-miR-93-5p |
ELISA, Immunohistochemistry, Luciferase reporter assay, Microarray, qRT-PCR, Western blot |
24606633 |
MIRT027974 |
hsa-miR-93-5p |
HITS-CLIP |
22473208 |
MIRT027974 |
hsa-miR-93-5p |
PAR-CLIP |
22012620 |
MIRT027974 |
hsa-miR-93-5p |
PAR-CLIP |
21572407 |
MIRT053287 |
hsa-miR-34b-5p |
Luciferase reporter assay, qRT-PCR, Western blot |
22336710 |
MIRT053287 |
hsa-miR-34b-5p |
PAR-CLIP |
22012620 |
MIRT053301 |
hsa-miR-373-3p |
Luciferase reporter assay, qRT-PCR, Western blot |
22020335 |
MIRT053301 |
hsa-miR-373-3p |
Luciferase reporter assay, qRT-PCR, Western blot |
25980442 |
MIRT053652 |
hsa-miR-145-5p |
Microarray |
22942087 |
MIRT053652 |
hsa-miR-145-5p |
Luciferase reporter assay, qRT-PCR, Western blot |
23986572 |
MIRT053652 |
hsa-miR-145-5p |
qRT-PCR, Luciferase reporter assay, Immunoblot, Western blot |
25323858 |
MIRT053652 |
hsa-miR-145-5p |
Luciferase reporter assay |
27388239 |
MIRT053735 |
hsa-miR-630 |
Microarray |
22942087 |
MIRT054452 |
hsa-miR-211-5p |
Luciferase reporter assay, Microarray, qRT-PCR, Western blot |
24039954 |
MIRT054486 |
hsa-miR-655-3p |
Luciferase reporter assay/Western blot, qRT-PCR |
23690952 |
MIRT091687 |
hsa-miR-130a-3p |
PAR-CLIP |
22012620 |
MIRT091687 |
hsa-miR-130a-3p |
PAR-CLIP |
21572407 |
MIRT091687 |
hsa-miR-130a-3p |
PAR-CLIP |
20371350 |
MIRT091687 |
hsa-miR-130a-3p |
Immunohistochemistry, Luciferase reporter assay, qRT-PCR, Western blot |
27304191 |
MIRT091688 |
hsa-miR-142-5p |
PAR-CLIP |
22012620 |
MIRT091688 |
hsa-miR-142-5p |
PAR-CLIP |
21572407 |
MIRT091688 |
hsa-miR-142-5p |
PAR-CLIP |
20371350 |
MIRT091688 |
hsa-miR-142-5p |
Luciferase reporter assay, qRT-PCR, Western blot |
26572508 |
MIRT091689 |
hsa-miR-106b-5p |
HITS-CLIP |
22473208 |
MIRT091689 |
hsa-miR-106b-5p |
PAR-CLIP |
22012620 |
MIRT091689 |
hsa-miR-106b-5p |
PAR-CLIP |
21572407 |
MIRT091689 |
hsa-miR-106b-5p |
PAR-CLIP |
20371350 |
MIRT091690 |
hsa-miR-301a-3p |
PAR-CLIP |
22012620 |
MIRT091690 |
hsa-miR-301a-3p |
PAR-CLIP |
21572407 |
MIRT091690 |
hsa-miR-301a-3p |
PAR-CLIP |
20371350 |
MIRT091691 |
hsa-miR-20b-5p |
HITS-CLIP |
22473208 |
MIRT091691 |
hsa-miR-20b-5p |
PAR-CLIP |
22012620 |
MIRT091691 |
hsa-miR-20b-5p |
PAR-CLIP |
21572407 |
MIRT091691 |
hsa-miR-20b-5p |
PAR-CLIP |
20371350 |
MIRT091692 |
hsa-miR-519c-3p |
PAR-CLIP |
21572407 |
MIRT091692 |
hsa-miR-519c-3p |
PAR-CLIP |
20371350 |
MIRT091693 |
hsa-miR-526b-3p |
PAR-CLIP |
22012620 |
MIRT091693 |
hsa-miR-526b-3p |
PAR-CLIP |
21572407 |
MIRT091693 |
hsa-miR-526b-3p |
PAR-CLIP |
20371350 |
MIRT091694 |
hsa-miR-519b-3p |
PAR-CLIP |
21572407 |
MIRT091694 |
hsa-miR-519b-3p |
PAR-CLIP |
20371350 |
MIRT091695 |
hsa-miR-519d-3p |
HITS-CLIP |
22473208 |
MIRT091695 |
hsa-miR-519d-3p |
PAR-CLIP |
22012620 |
MIRT091695 |
hsa-miR-519d-3p |
PAR-CLIP |
21572407 |
MIRT091695 |
hsa-miR-519d-3p |
PAR-CLIP |
20371350 |
MIRT091697 |
hsa-miR-519a-3p |
PAR-CLIP |
21572407 |
MIRT091697 |
hsa-miR-519a-3p |
PAR-CLIP |
20371350 |
MIRT091699 |
hsa-miR-548c-3p |
PAR-CLIP |
21572407 |
MIRT091699 |
hsa-miR-548c-3p |
PAR-CLIP |
20371350 |
MIRT091700 |
hsa-miR-454-3p |
PAR-CLIP |
22012620 |
MIRT091700 |
hsa-miR-454-3p |
PAR-CLIP |
21572407 |
MIRT091700 |
hsa-miR-454-3p |
PAR-CLIP |
20371350 |
MIRT091701 |
hsa-miR-301b-3p |
PAR-CLIP |
22012620 |
MIRT091701 |
hsa-miR-301b-3p |
PAR-CLIP |
21572407 |
MIRT091701 |
hsa-miR-301b-3p |
PAR-CLIP |
20371350 |
MIRT091702 |
hsa-miR-4295 |
PAR-CLIP |
22012620 |
MIRT091702 |
hsa-miR-4295 |
PAR-CLIP |
21572407 |
MIRT091702 |
hsa-miR-4295 |
PAR-CLIP |
20371350 |
MIRT091703 |
hsa-miR-3666 |
PAR-CLIP |
22012620 |
MIRT091703 |
hsa-miR-3666 |
PAR-CLIP |
21572407 |
MIRT091703 |
hsa-miR-3666 |
PAR-CLIP |
20371350 |
MIRT091704 |
hsa-miR-5590-3p |
PAR-CLIP |
22012620 |
MIRT091704 |
hsa-miR-5590-3p |
PAR-CLIP |
21572407 |
MIRT091704 |
hsa-miR-5590-3p |
PAR-CLIP |
20371350 |
MIRT091712 |
hsa-miR-1276 |
PAR-CLIP |
23592263 |
MIRT091712 |
hsa-miR-1276 |
PAR-CLIP |
22012620 |
MIRT162313 |
hsa-miR-216a-5p |
PAR-CLIP |
21572407 |
MIRT162322 |
hsa-miR-551b-5p |
PAR-CLIP |
20371350 |
MIRT162323 |
hsa-miR-1200 |
PAR-CLIP |
21572407 |
MIRT162326 |
hsa-miR-544b |
PAR-CLIP |
21572407 |
MIRT162333 |
hsa-miR-5095 |
PAR-CLIP |
22012620 |
MIRT162333 |
hsa-miR-5095 |
PAR-CLIP |
21572407 |
MIRT162335 |
hsa-miR-6758-3p |
PAR-CLIP |
21572407 |
MIRT162337 |
hsa-miR-7151-3p |
PAR-CLIP |
22012620 |
MIRT162337 |
hsa-miR-7151-3p |
PAR-CLIP |
21572407 |
MIRT243467 |
hsa-miR-33a-3p |
PAR-CLIP |
23592263 |
MIRT243467 |
hsa-miR-33a-3p |
PAR-CLIP |
22012620 |
MIRT243468 |
hsa-miR-409-3p |
PAR-CLIP |
23592263 |
MIRT243469 |
hsa-miR-610 |
PAR-CLIP |
23592263 |
MIRT243469 |
hsa-miR-610 |
PAR-CLIP |
22012620 |
MIRT243470 |
hsa-miR-3978 |
PAR-CLIP |
22012620 |
MIRT307002 |
hsa-miR-940 |
PAR-CLIP |
22012620 |
MIRT307008 |
hsa-miR-6808-5p |
PAR-CLIP |
22012620 |
MIRT307010 |
hsa-miR-6893-5p |
PAR-CLIP |
22012620 |
MIRT307050 |
hsa-miR-34a-5p |
PAR-CLIP |
22012620 |
MIRT307051 |
hsa-miR-34c-5p |
PAR-CLIP |
22012620 |
MIRT307052 |
hsa-miR-449a |
PAR-CLIP |
22012620 |
MIRT307053 |
hsa-miR-449b-5p |
PAR-CLIP |
22012620 |
MIRT307054 |
hsa-miR-449c-5p |
PAR-CLIP |
22012620 |
MIRT307055 |
hsa-miR-1253 |
PAR-CLIP |
23592263 |
MIRT307056 |
hsa-miR-1910-3p |
PAR-CLIP |
22012620 |
MIRT307057 |
hsa-miR-2682-5p |
PAR-CLIP |
22012620 |
MIRT307058 |
hsa-miR-6511a-5p |
PAR-CLIP |
22012620 |
MIRT307059 |
hsa-miR-6770-5p |
PAR-CLIP |
23592263 |
MIRT307060 |
hsa-miR-6806-5p |
PAR-CLIP |
22012620 |
MIRT370849 |
hsa-miR-1827 |
PAR-CLIP |
23592263 |
MIRT370850 |
hsa-miR-4316 |
PAR-CLIP |
23592263 |
MIRT438536 |
hsa-miR-9-5p |
Luciferase reporter assay, qRT-PCR |
25024357 |
MIRT438536 |
hsa-miR-9-5p |
Luciferase reporter assay, qRT-PCR, Western blot |
27756824 |
MIRT438536 |
hsa-miR-9-5p |
Luciferase reporter assay, qRT-PCR, Western blot |
26315535 |
MIRT438536 |
hsa-miR-9-5p |
qRT-PCR, Western blot |
27274768 |
MIRT466405 |
hsa-miR-582-5p |
PAR-CLIP |
23592263 |
MIRT466405 |
hsa-miR-582-5p |
PAR-CLIP |
22012620 |
MIRT466406 |
hsa-miR-101-3p |
PAR-CLIP |
23592263 |
MIRT466406 |
hsa-miR-101-3p |
PAR-CLIP |
22012620 |
MIRT466407 |
hsa-miR-595 |
PAR-CLIP |
23592263 |
MIRT533835 |
hsa-miR-4438 |
PAR-CLIP |
22012620 |
MIRT533835 |
hsa-miR-4438 |
PAR-CLIP |
21572407 |
MIRT533836 |
hsa-miR-4796-3p |
PAR-CLIP |
22012620 |
MIRT533836 |
hsa-miR-4796-3p |
PAR-CLIP |
21572407 |
MIRT533836 |
hsa-miR-4796-3p |
PAR-CLIP |
20371350 |
MIRT533837 |
hsa-miR-548ah-5p |
PAR-CLIP |
22012620 |
MIRT533837 |
hsa-miR-548ah-5p |
PAR-CLIP |
21572407 |
MIRT533837 |
hsa-miR-548ah-5p |
PAR-CLIP |
20371350 |
MIRT533838 |
hsa-miR-3609 |
PAR-CLIP |
22012620 |
MIRT533838 |
hsa-miR-3609 |
PAR-CLIP |
21572407 |
MIRT533838 |
hsa-miR-3609 |
PAR-CLIP |
20371350 |
MIRT553662 |
hsa-miR-1185-2-3p |
PAR-CLIP |
21572407 |
MIRT553663 |
hsa-miR-1185-1-3p |
PAR-CLIP |
21572407 |
MIRT553664 |
hsa-let-7f-2-3p |
PAR-CLIP |
21572407 |
MIRT553665 |
hsa-miR-4324 |
PAR-CLIP |
21572407 |
MIRT608129 |
hsa-miR-574-5p |
HITS-CLIP |
24906430 |
MIRT608129 |
hsa-miR-574-5p |
HITS-CLIP |
27418678 |
MIRT608130 |
hsa-miR-147a |
HITS-CLIP |
24906430 |
MIRT608130 |
hsa-miR-147a |
HITS-CLIP |
27418678 |
MIRT608131 |
hsa-miR-6867-5p |
HITS-CLIP |
24906430 |
MIRT608131 |
hsa-miR-6867-5p |
HITS-CLIP |
27418678 |
MIRT608132 |
hsa-miR-6818-5p |
HITS-CLIP |
24906430 |
MIRT608132 |
hsa-miR-6818-5p |
HITS-CLIP |
27418678 |
MIRT608133 |
hsa-miR-4732-5p |
HITS-CLIP |
24906430 |
MIRT608133 |
hsa-miR-4732-5p |
HITS-CLIP |
27418678 |
MIRT608134 |
hsa-miR-6832-5p |
HITS-CLIP |
24906430 |
MIRT608134 |
hsa-miR-6832-5p |
HITS-CLIP |
27418678 |
MIRT608135 |
hsa-miR-6856-5p |
HITS-CLIP |
24906430 |
MIRT608135 |
hsa-miR-6856-5p |
HITS-CLIP |
27418678 |
MIRT608136 |
hsa-miR-6758-5p |
HITS-CLIP |
24906430 |
MIRT608136 |
hsa-miR-6758-5p |
HITS-CLIP |
27418678 |
MIRT712126 |
hsa-miR-488-3p |
HITS-CLIP |
19536157 |
MIRT712127 |
hsa-miR-519e-5p |
HITS-CLIP |
19536157 |
MIRT712128 |
hsa-miR-515-5p |
HITS-CLIP |
19536157 |
MIRT712129 |
hsa-miR-6777-3p |
HITS-CLIP |
19536157 |
MIRT712130 |
hsa-miR-7161-5p |
HITS-CLIP |
19536157 |
MIRT712131 |
hsa-miR-548u |
HITS-CLIP |
19536157 |
MIRT717786 |
hsa-miR-7159-5p |
HITS-CLIP |
19536157 |
MIRT717787 |
hsa-miR-505-3p |
HITS-CLIP |
19536157 |
MIRT717788 |
hsa-miR-7162-3p |
HITS-CLIP |
19536157 |
MIRT717789 |
hsa-miR-4649-3p |
HITS-CLIP |
19536157 |
MIRT717790 |
hsa-miR-3065-5p |
HITS-CLIP |
19536157 |
MIRT717791 |
hsa-miR-3200-5p |
HITS-CLIP |
19536157 |
MIRT717792 |
hsa-miR-7849-3p |
HITS-CLIP |
19536157 |
MIRT717793 |
hsa-miR-606 |
HITS-CLIP |
19536157 |
MIRT717794 |
hsa-miR-570-3p |
HITS-CLIP |
19536157 |
MIRT717795 |
hsa-miR-5688 |
HITS-CLIP |
19536157 |
MIRT717796 |
hsa-miR-495-3p |
HITS-CLIP |
19536157 |
MIRT732972 |
hsa-miR-196a-5p |
Immunohistochemistry, In situ hybridization, Luciferase reporter assay, qRT-PCR, Western blot |
26940097 |
MIRT732973 |
hsa-miR-196b-5p |
Immunohistochemistry, In situ hybridization, Luciferase reporter assay, qRT-PCR, Western blot |
26940097 |
MIRT733037 |
hsa-miR-202-5p |
Luciferase reporter assay, Western blot |
28373289 |
MIRT734925 |
hsa-miR-181c-5p |
Immunohistochemistry, Luciferase reporter assay, qRT-PCR, Western blot |
26682928 |
MIRT735049 |
hsa-miR-520a-3p |
Immunoblot, Luciferase reporter assay, qRT-PCR |
28184932 |
MIRT735097 |
hsa-miR-23b-5p |
Luciferase reporter assay |
27388239 |
MIRT735114 |
hsa-miR-302d-3p |
Luciferase reporter assay, qRT-PCR, Western blot |
28352351 |
|
Transcription factors
|
|
Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
|
GO ID |
Ontology |
Definition |
Evidence |
Reference |
GO:0001568 |
Process |
Blood vessel development |
TAS |
10092230 |
GO:0001569 |
Process |
Branching involved in blood vessel morphogenesis |
ISS |
|
GO:0001570 |
Process |
Vasculogenesis |
ISS |
|
GO:0001666 |
Process |
Response to hypoxia |
IEA |
|
GO:0001701 |
Process |
In utero embryonic development |
IEA |
|
GO:0001947 |
Process |
Heart looping |
ISS |
|
GO:0002053 |
Process |
Positive regulation of mesenchymal cell proliferation |
ISS |
|
GO:0002088 |
Process |
Lens development in camera-type eye |
IEA |
|
GO:0002651 |
Process |
Positive regulation of tolerance induction to self antigen |
ISS |
|
GO:0002663 |
Process |
Positive regulation of B cell tolerance induction |
ISS |
|
GO:0002666 |
Process |
Positive regulation of T cell tolerance induction |
ISS |
|
GO:0003148 |
Process |
Outflow tract septum morphogenesis |
ISS |
|
GO:0003149 |
Process |
Membranous septum morphogenesis |
ISS |
|
GO:0003151 |
Process |
Outflow tract morphogenesis |
ISS |
|
GO:0003181 |
Process |
Atrioventricular valve morphogenesis |
ISS |
|
GO:0003186 |
Process |
Tricuspid valve morphogenesis |
ISS |
|
GO:0003214 |
Process |
Cardiac left ventricle morphogenesis |
ISS |
|
GO:0003274 |
Process |
Endocardial cushion fusion |
ISS |
|
GO:0003430 |
Process |
Growth plate cartilage chondrocyte growth |
IEA |
|
GO:0004674 |
Function |
Protein serine/threonine kinase activity |
IBA |
21873635 |
GO:0004675 |
Function |
Transmembrane receptor protein serine/threonine kinase activity |
IDA |
12015308 |
GO:0005024 |
Function |
Transforming growth factor beta-activated receptor activity |
IBA |
21873635 |
GO:0005024 |
Function |
Transforming growth factor beta-activated receptor activity |
IC |
1326540 |
GO:0005024 |
Function |
Transforming growth factor beta-activated receptor activity |
IDA |
7852346, 18453574 |
GO:0005024 |
Function |
Transforming growth factor beta-activated receptor activity |
IMP |
1333888 |
GO:0005026 |
Function |
Transforming growth factor beta receptor activity, type II |
IEA |
|
GO:0005515 |
Function |
Protein binding |
IPI |
7852346, 8242742, 8555189, 8622651, 9865696, 11278302, 11279102, 11483955, 11850637, 12015308, 15702480, 16530041, 18243111, 20856203, 20860622, 21054789, 21423151, 21441952, 23178117, 24263861, 32814053 |
GO:0005524 |
Function |
ATP binding |
IEA |
|
GO:0005539 |
Function |
Glycosaminoglycan binding |
IDA |
7852346 |
GO:0005829 |
Component |
Cytosol |
TAS |
|
GO:0005886 |
Component |
Plasma membrane |
IBA |
21873635 |
GO:0005886 |
Component |
Plasma membrane |
IDA |
25893292 |
GO:0005886 |
Component |
Plasma membrane |
TAS |
|
GO:0005887 |
Component |
Integral component of plasma membrane |
IEA |
|
GO:0005901 |
Component |
Caveola |
IDA |
17878231 |
GO:0006468 |
Process |
Protein phosphorylation |
IBA |
21873635 |
GO:0006468 |
Process |
Protein phosphorylation |
IDA |
12015308 |
GO:0006898 |
Process |
Receptor-mediated endocytosis |
IEA |
|
GO:0006915 |
Process |
Apoptotic process |
IDA |
17471240 |
GO:0007179 |
Process |
Transforming growth factor beta receptor signaling pathway |
IBA |
21873635 |
GO:0007179 |
Process |
Transforming growth factor beta receptor signaling pathway |
IC |
1326540 |
GO:0007179 |
Process |
Transforming growth factor beta receptor signaling pathway |
IDA |
18453574 |
GO:0007179 |
Process |
Transforming growth factor beta receptor signaling pathway |
IMP |
1333888 |
GO:0007179 |
Process |
Transforming growth factor beta receptor signaling pathway |
TAS |
|
GO:0007182 |
Process |
Common-partner SMAD protein phosphorylation |
IEA |
|
GO:0007219 |
Process |
Notch signaling pathway |
IEA |
|
GO:0007224 |
Process |
Smoothened signaling pathway |
IEA |
|
GO:0007369 |
Process |
Gastrulation |
IEA |
|
GO:0007420 |
Process |
Brain development |
ISS |
|
GO:0007507 |
Process |
Heart development |
IBA |
21873635 |
GO:0007507 |
Process |
Heart development |
ISS |
|
GO:0007566 |
Process |
Embryo implantation |
IEA |
|
GO:0007568 |
Process |
Aging |
IEA |
|
GO:0007584 |
Process |
Response to nutrient |
IEA |
|
GO:0008284 |
Process |
Positive regulation of cell population proliferation |
TAS |
7761852 |
GO:0009612 |
Process |
Response to mechanical stimulus |
IEA |
|
GO:0009749 |
Process |
Response to glucose |
IEA |
|
GO:0009897 |
Component |
External side of plasma membrane |
IDA |
18453574 |
GO:0010468 |
Process |
Regulation of gene expression |
IEA |
|
GO:0010634 |
Process |
Positive regulation of epithelial cell migration |
IEA |
|
GO:0010718 |
Process |
Positive regulation of epithelial to mesenchymal transition |
IDA |
26459119 |
GO:0016021 |
Component |
Integral component of membrane |
IDA |
7852346 |
GO:0017002 |
Function |
Activin-activated receptor activity |
IBA |
21873635 |
GO:0018105 |
Process |
Peptidyl-serine phosphorylation |
IDA |
12015308 |
GO:0018107 |
Process |
Peptidyl-threonine phosphorylation |
IDA |
12015308 |
GO:0030512 |
Process |
Negative regulation of transforming growth factor beta receptor signaling pathway |
TAS |
|
GO:0031100 |
Process |
Animal organ regeneration |
IEA |
|
GO:0031435 |
Function |
Mitogen-activated protein kinase kinase kinase binding |
IEA |
|
GO:0032147 |
Process |
Activation of protein kinase activity |
ISS |
|
GO:0032924 |
Process |
Activin receptor signaling pathway |
IEA |
|
GO:0034713 |
Function |
Type I transforming growth factor beta receptor binding |
IBA |
21873635 |
GO:0034713 |
Function |
Type I transforming growth factor beta receptor binding |
IPI |
1333888 |
GO:0035162 |
Process |
Embryonic hemopoiesis |
ISS |
|
GO:0042060 |
Process |
Wound healing |
IEA |
|
GO:0042127 |
Process |
Regulation of cell population proliferation |
ISS |
|
GO:0042493 |
Process |
Response to drug |
IDA |
17878231 |
GO:0043011 |
Process |
Myeloid dendritic cell differentiation |
ISS |
|
GO:0043235 |
Component |
Receptor complex |
IBA |
21873635 |
GO:0043235 |
Component |
Receptor complex |
IDA |
7852346, 8774881 |
GO:0043415 |
Process |
Positive regulation of skeletal muscle tissue regeneration |
IEA |
|
GO:0043627 |
Process |
Response to estrogen |
IEA |
|
GO:0045121 |
Component |
Membrane raft |
IDA |
25893292 |
GO:0045766 |
Process |
Positive regulation of angiogenesis |
IEA |
|
GO:0046332 |
Function |
SMAD binding |
IBA |
21873635 |
GO:0046332 |
Function |
SMAD binding |
IDA |
11157754, 18453574 |
GO:0046872 |
Function |
Metal ion binding |
IEA |
|
GO:0048185 |
Function |
Activin binding |
IBA |
21873635 |
GO:0048545 |
Process |
Response to steroid hormone |
IEA |
|
GO:0048565 |
Process |
Digestive tract development |
IEA |
|
GO:0048661 |
Process |
Positive regulation of smooth muscle cell proliferation |
IEA |
|
GO:0048701 |
Process |
Embryonic cranial skeleton morphogenesis |
ISS |
|
GO:0050431 |
Function |
Transforming growth factor beta binding |
IBA |
21873635 |
GO:0050431 |
Function |
Transforming growth factor beta binding |
IDA |
7852346, 18243111, 18453574 |
GO:0050431 |
Function |
Transforming growth factor beta binding |
IPI |
1326540, 1333888 |
GO:0050431 |
Function |
Transforming growth factor beta binding |
IPI |
7852346 |
GO:0051138 |
Process |
Positive regulation of NK T cell differentiation |
ISS |
|
GO:0060044 |
Process |
Negative regulation of cardiac muscle cell proliferation |
IEA |
|
GO:0060389 |
Process |
Pathway-restricted SMAD protein phosphorylation |
IDA |
18453574 |
GO:0060412 |
Process |
Ventricular septum morphogenesis |
ISS |
|
GO:0060434 |
Process |
Bronchus morphogenesis |
IEA |
|
GO:0060440 |
Process |
Trachea formation |
IEA |
|
GO:0060443 |
Process |
Mammary gland morphogenesis |
IEA |
|
GO:0060463 |
Process |
Lung lobe morphogenesis |
IEA |
|
GO:0062009 |
Process |
Secondary palate development |
ISS |
|
GO:0070723 |
Process |
Response to cholesterol |
IDA |
17878231 |
GO:0071363 |
Process |
Cellular response to growth factor stimulus |
IBA |
21873635 |
GO:1905007 |
Process |
Positive regulation of epithelial to mesenchymal transition involved in endocardial cushion formation |
ISS |
|
GO:1905315 |
Process |
Cell proliferation involved in endocardial cushion morphogenesis |
ISS |
|
GO:1905316 |
Process |
Superior endocardial cushion morphogenesis |
ISS |
|
GO:1905317 |
Process |
Inferior endocardial cushion morphogenesis |
ISS |
|
GO:1990086 |
Process |
Lens fiber cell apoptotic process |
IEA |
|
GO:1990428 |
Process |
MiRNA transport |
ISS |
|
GO:2000379 |
Process |
Positive regulation of reactive oxygen species metabolic process |
IMP |
20160708 |
GO:2000563 |
Process |
Positive regulation of CD4-positive, alpha-beta T cell proliferation |
IDA |
17164348 |
|
Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
|
|
Protein
|
UniProt ID |
P37173 |
Protein name |
TGF-beta receptor type-2 (TGFR-2) (EC 2.7.11.30) (TGF-beta type II receptor) (Transforming growth factor-beta receptor type II) (TGF-beta receptor type II) (TbetaR-II) |
Protein function |
Transmembrane serine/threonine kinase forming with the TGF-beta type I serine/threonine kinase receptor, TGFBR1, the non-promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinogenesis. The formation of the receptor complex composed of 2 TGFBR1 and 2 TGFBR2 molecules symmetrically bound to the cytokine dimer results in the phosphorylation and the activation of TGFRB1 by the constitutively active TGFBR2. Activated TGFBR1 phosphorylates SMAD2 which dissociates from the receptor and interacts with SMAD4. The SMAD2-SMAD4 complex is subsequently translocated to the nucleus where it modulates the transcription of the TGF-beta-regulated genes. This constitutes the canonical SMAD-dependent TGF-beta signaling cascade. Also involved in non-canonical, SMAD-independent TGF-beta signaling pathways. |
PDB |
1KTZ
,
1M9Z
,
1PLO
,
2PJY
,
3KFD
,
4P7U
,
4XJJ
,
5E8V
,
5E8Y
,
5E91
,
5E92
,
5QIN
,
5TX4
,
5TY4
|
Family and domains |
Pfam
Accession |
ID |
Position in sequence |
Description |
Type |
PF08917 |
ecTbetaR2 |
49 → 159 |
Transforming growth factor beta receptor 2 ectodomain |
Domain |
PF07714 |
PK_Tyr_Ser-Thr |
244 → 538 |
Protein tyrosine and serine/threonine kinase |
Domain |
|
Sequence |
|
Sequence length |
567 |
Interactions |
View interactions |
|
|