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TGFB2 (transforming growth factor beta 2)

Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
7042
Gene nameGene Name - the full gene name approved by the HGNC.
Transforming growth factor beta 2
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
TGFB2
SynonymsGene synonyms aliases
G-TSF, LDS4, TGF-beta2
ChromosomeChromosome number
1
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
1q41
SummarySummary of gene provided in NCBI Entrez Gene.
This gene encodes a secreted ligand of the TGF-beta (transforming growth factor-beta) superfamily of proteins. Ligands of this family bind various TGF-beta receptors leading to recruitment and activation of SMAD family transcription factors that regulate
SNPsSNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs10482810 G>C Conflicting-interpretations-of-pathogenicity, benign-likely-benign, likely-benign Non coding transcript variant, missense variant, coding sequence variant
rs11466408 C>T Conflicting-interpretations-of-pathogenicity, likely-benign Intron variant
rs387907278 C>A Pathogenic Coding sequence variant, missense variant, non coding transcript variant
rs398122884 ACAAT>- Pathogenic Coding sequence variant, frameshift variant, non coding transcript variant
rs398122885 C>A,T Pathogenic Synonymous variant, coding sequence variant, stop gained, non coding transcript variant
miRNAmiRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT002285 hsa-miR-141-3p Immunoblot, Luciferase reporter assay, qRT-PCR 18483486
MIRT006058 hsa-miR-29b-3p ELISA, GFP reporter assay, qRT-PCR 21273536
MIRT006058 hsa-miR-29b-3p ELISA, GFP reporter assay, qRT-PCR 21273536
MIRT006058 hsa-miR-29b-3p ELISA, GFP reporter assay, qRT-PCR 21273536
MIRT017363 hsa-miR-335-5p Microarray 18185580
Transcription factors
Transcription factor Regulation Reference
ATF1 Activation 11776974
ATF2 Repression 1400310
USF1 Activation 11776974
USF2 Activation 11776974
USF2 Unknown 8943301
Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000902 Process Cell morphogenesis IDA 15896309
GO:0001501 Process Skeletal system development ISS
GO:0001540 Function Amyloid-beta binding IDA 16227582
GO:0001654 Process Eye development IDA 15944186
GO:0001666 Process Response to hypoxia IMP 12411310
Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM
HGNC
e!Ensembl
Protein
UniProt ID P61812
Protein name Transforming growth factor beta-2 proprotein (Cetermin) (Glioblastoma-derived T-cell suppressor factor) (G-TSF) [Cleaved into: Latency-associated peptide (LAP); Transforming growth factor beta-2 (TGF-beta-2)]
Protein function [Transforming growth factor beta-2 proprotein]: Precursor of the Latency-associated peptide (LAP) and Transforming growth factor beta-2 (TGF-beta-2) chains, which constitute the regulatory and active subunit of TGF-beta-2, respectively. {ECO:000
PDB 1TFG , 2TGI , 4KXZ , 5TX4 , 5TY4 , 6I9J , 6XM2 , 7RCO , 8DC0 , 8FXS , 8FXV
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00688 TGFb_propeptide
20 284
TGF-beta propeptide
Family
PF00019 TGF_beta
316 413
Transforming growth factor beta like domain
Domain
Sequence
Sequence length 414
Interactions View interactions

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