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TBK1 (TANK binding kinase 1)

Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
29110
Gene nameGene Name - the full gene name approved by the HGNC.
TANK binding kinase 1
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
TBK1
SynonymsGene synonyms aliases
AIARV, FTDALS4, IIAE8, NAK, T2K
ChromosomeChromosome number
12
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
12q14.2
SummarySummary of gene provided in NCBI Entrez Gene.
The NF-kappa-B (NFKB) complex of proteins is inhibited by I-kappa-B (IKB) proteins, which inactivate NFKB by trapping it in the cytoplasm. Phosphorylation of serine residues on the IKB proteins by IKB kinases marks them for destruction via the ubiquitinat
SNPsSNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs55824172 C>G,T Likely-pathogenic Missense variant, non coding transcript variant, coding sequence variant
rs142030898 C>T Other, pathogenic Non coding transcript variant, stop gained, coding sequence variant
rs748112833 G>A Pathogenic Coding sequence variant, missense variant, non coding transcript variant
rs755950225 A>- Pathogenic Non coding transcript variant, frameshift variant, coding sequence variant
rs756751089 A>G Pathogenic Missense variant, non coding transcript variant, coding sequence variant
miRNAmiRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT006971 hsa-miR-200c-3p Luciferase reporter assay, Western blot 22991189
MIRT006971 hsa-miR-200c-3p Luciferase reporter assay, Western blot 22991189
MIRT003360 hsa-miR-221-3p Reporter assay;Western blot;Microarray 20018759
MIRT053453 hsa-miR-452-5p Microarray 23807165
MIRT517392 hsa-miR-3133 PAR-CLIP 20371350
Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0002218 Process Activation of innate immune response IEA
GO:0003676 Function Nucleic acid binding IEA
GO:0004672 Function Protein kinase activity TAS
GO:0004674 Function Protein serine/threonine kinase activity IBA 21873635
GO:0004674 Function Protein serine/threonine kinase activity IDA 25636800, 25803835, 27103069
Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM
HGNC
e!Ensembl
Protein
UniProt ID Q9UHD2
Protein name Serine/threonine-protein kinase TBK1 (EC 2.7.11.1) (NF-kappa-B-activating kinase) (T2K) (TANK-binding kinase 1)
Protein function Serine/threonine kinase that plays an essential role in regulating inflammatory responses to foreign agents (PubMed:10581243, PubMed:11839743, PubMed:12692549, PubMed:12702806, PubMed:14703513, PubMed:15367631, PubMed:15485837, PubMed:18583960,
PDB 4EFO , 4EUT , 4EUU , 4IM0 , 4IM2 , 4IM3 , 4IW0 , 4IWO , 4IWP , 4IWQ , 5EOA , 5EOF , 5EP6 , 5W5V , 6BNY , 6BOD , 6BOE , 6CQ0 , 6CQ4 , 6CQ5 , 6NT9 , 6O8B , 6RSR , 6RST , 6RSU
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00069 Pkinase
9 299
Protein kinase domain
Domain
PF18396 TBK1_ULD
308 395
TANK binding kinase 1 ubiquitin-like domain
Domain
PF18394 TBK1_CCD1
400 655
TANK-binding kinase 1 coiled-coil domain 1
Coiled-coil
Sequence
Sequence length 729
Interactions View interactions

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