Gene
|
Entrez ID
Entrez Gene ID - the GENE ID in NCBI Gene database.
|
64750 |
Gene nameGene Name - the full gene name approved by the HGNC.
|
SMAD specific E3 ubiquitin protein ligase 2 |
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
|
SMURF2 |
SynonymsGene synonyms aliases
|
- |
ChromosomeChromosome number
|
17 |
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
|
17q23.3-q24.1 |
miRNAmiRNA information provided by mirtarbase database.
|
miRTarBase ID |
miRNA |
Experiments |
Reference |
MIRT023400 |
hsa-miR-122-5p |
Microarray |
17612493 |
MIRT031987 |
hsa-miR-16-5p |
Microarray |
21199864 |
MIRT653292 |
hsa-miR-125a-3p |
HITS-CLIP |
23824327 |
MIRT653291 |
hsa-miR-764 |
HITS-CLIP |
23824327 |
MIRT653290 |
hsa-miR-3934-5p |
HITS-CLIP |
23824327 |
MIRT653289 |
hsa-miR-186-3p |
HITS-CLIP |
23824327 |
MIRT653288 |
hsa-miR-1224-3p |
HITS-CLIP |
23824327 |
MIRT653287 |
hsa-miR-1234-3p |
HITS-CLIP |
23824327 |
MIRT653286 |
hsa-miR-7107-5p |
HITS-CLIP |
23824327 |
MIRT653285 |
hsa-miR-3653-5p |
HITS-CLIP |
23824327 |
MIRT653284 |
hsa-miR-6790-3p |
HITS-CLIP |
23824327 |
MIRT653283 |
hsa-miR-6821-3p |
HITS-CLIP |
23824327 |
MIRT653282 |
hsa-miR-4454 |
HITS-CLIP |
23824327 |
MIRT653281 |
hsa-miR-378a-5p |
HITS-CLIP |
23824327 |
MIRT542376 |
hsa-miR-6872-3p |
PAR-CLIP |
21572407 |
MIRT542375 |
hsa-miR-6807-5p |
PAR-CLIP |
21572407 |
MIRT534142 |
hsa-miR-3667-5p |
PAR-CLIP |
22012620 |
MIRT534141 |
hsa-miR-4495 |
PAR-CLIP |
22012620 |
MIRT534140 |
hsa-miR-665 |
PAR-CLIP |
22012620 |
MIRT534139 |
hsa-miR-4635 |
PAR-CLIP |
22012620 |
MIRT197869 |
hsa-miR-630 |
PAR-CLIP |
22012620 |
MIRT534138 |
hsa-miR-526b-5p |
PAR-CLIP |
22012620 |
MIRT450665 |
hsa-miR-431-5p |
PAR-CLIP |
22100165 |
MIRT450664 |
hsa-miR-382-5p |
PAR-CLIP |
22100165 |
MIRT450663 |
hsa-miR-93-3p |
PAR-CLIP |
22100165 |
MIRT450662 |
hsa-miR-4670-3p |
PAR-CLIP |
22100165 |
MIRT450661 |
hsa-miR-203a-3p |
PAR-CLIP |
22100165 |
MIRT450660 |
hsa-miR-511-5p |
PAR-CLIP |
22100165 |
MIRT733577 |
hsa-miR-497-5p |
Flow cytometry, Luciferase reporter assay, qRT-PCR, Western blotting |
33193708 |
MIRT733577 |
hsa-miR-497-5p |
Flow cytometry, Luciferase reporter assay, qRT-PCR, Western blotting |
33193708 |
MIRT736113 |
hsa-miR-503-5p |
Luciferase reporter assay, Western blotting, qRT-PCR, Flow cytometry, ELISA |
33872218 |
MIRT653292 |
hsa-miR-125a-3p |
HITS-CLIP |
23824327 |
MIRT653291 |
hsa-miR-764 |
HITS-CLIP |
23824327 |
MIRT653290 |
hsa-miR-3934-5p |
HITS-CLIP |
23824327 |
MIRT653289 |
hsa-miR-186-3p |
HITS-CLIP |
23824327 |
MIRT653288 |
hsa-miR-1224-3p |
HITS-CLIP |
23824327 |
MIRT653287 |
hsa-miR-1234-3p |
HITS-CLIP |
23824327 |
MIRT653286 |
hsa-miR-7107-5p |
HITS-CLIP |
23824327 |
MIRT653285 |
hsa-miR-3653-5p |
HITS-CLIP |
23824327 |
MIRT653284 |
hsa-miR-6790-3p |
HITS-CLIP |
23824327 |
MIRT653283 |
hsa-miR-6821-3p |
HITS-CLIP |
23824327 |
MIRT653282 |
hsa-miR-4454 |
HITS-CLIP |
23824327 |
MIRT653281 |
hsa-miR-378a-5p |
HITS-CLIP |
23824327 |
MIRT542376 |
hsa-miR-6872-3p |
PAR-CLIP |
21572407 |
MIRT542375 |
hsa-miR-6807-5p |
PAR-CLIP |
21572407 |
MIRT534142 |
hsa-miR-3667-5p |
PAR-CLIP |
22012620 |
MIRT534141 |
hsa-miR-4495 |
PAR-CLIP |
22012620 |
MIRT534140 |
hsa-miR-665 |
PAR-CLIP |
22012620 |
MIRT534139 |
hsa-miR-4635 |
PAR-CLIP |
22012620 |
MIRT197869 |
hsa-miR-630 |
PAR-CLIP |
22012620 |
MIRT534138 |
hsa-miR-526b-5p |
PAR-CLIP |
22012620 |
MIRT450665 |
hsa-miR-431-5p |
PAR-CLIP |
22100165 |
MIRT450664 |
hsa-miR-382-5p |
PAR-CLIP |
22100165 |
MIRT450663 |
hsa-miR-93-3p |
PAR-CLIP |
22100165 |
MIRT450662 |
hsa-miR-4670-3p |
PAR-CLIP |
22100165 |
MIRT450661 |
hsa-miR-203a-3p |
PAR-CLIP |
22100165 |
MIRT450660 |
hsa-miR-511-5p |
PAR-CLIP |
22100165 |
MIRT1374472 |
hsa-miR-1179 |
CLIP-seq |
|
MIRT1374473 |
hsa-miR-15a |
CLIP-seq |
|
MIRT1374474 |
hsa-miR-15b |
CLIP-seq |
|
MIRT1374475 |
hsa-miR-16 |
CLIP-seq |
|
MIRT1374476 |
hsa-miR-195 |
CLIP-seq |
|
MIRT1374477 |
hsa-miR-299-5p |
CLIP-seq |
|
MIRT1374478 |
hsa-miR-3121-3p |
CLIP-seq |
|
MIRT1374479 |
hsa-miR-3646 |
CLIP-seq |
|
MIRT1374480 |
hsa-miR-3919 |
CLIP-seq |
|
MIRT1374481 |
hsa-miR-424 |
CLIP-seq |
|
MIRT1374482 |
hsa-miR-4310 |
CLIP-seq |
|
MIRT1374483 |
hsa-miR-4464 |
CLIP-seq |
|
MIRT1374484 |
hsa-miR-4477a |
CLIP-seq |
|
MIRT1374485 |
hsa-miR-4524 |
CLIP-seq |
|
MIRT1374486 |
hsa-miR-4698 |
CLIP-seq |
|
MIRT1374487 |
hsa-miR-4719 |
CLIP-seq |
|
MIRT1374488 |
hsa-miR-4723-5p |
CLIP-seq |
|
MIRT1374489 |
hsa-miR-4748 |
CLIP-seq |
|
MIRT1374490 |
hsa-miR-4756-3p |
CLIP-seq |
|
MIRT1374491 |
hsa-miR-497 |
CLIP-seq |
|
MIRT1374492 |
hsa-miR-502-5p |
CLIP-seq |
|
MIRT1374493 |
hsa-miR-503 |
CLIP-seq |
|
MIRT1374494 |
hsa-miR-607 |
CLIP-seq |
|
MIRT1374495 |
hsa-miR-646 |
CLIP-seq |
|
MIRT1374496 |
hsa-miR-659 |
CLIP-seq |
|
MIRT1374497 |
hsa-miR-9 |
CLIP-seq |
|
MIRT1374473 |
hsa-miR-15a |
CLIP-seq |
|
MIRT1374474 |
hsa-miR-15b |
CLIP-seq |
|
MIRT1374475 |
hsa-miR-16 |
CLIP-seq |
|
MIRT1374476 |
hsa-miR-195 |
CLIP-seq |
|
MIRT1374478 |
hsa-miR-3121-3p |
CLIP-seq |
|
MIRT1374481 |
hsa-miR-424 |
CLIP-seq |
|
MIRT1374484 |
hsa-miR-4477a |
CLIP-seq |
|
MIRT1374485 |
hsa-miR-4524 |
CLIP-seq |
|
MIRT1553871 |
hsa-miR-4757-5p |
CLIP-seq |
|
MIRT1374491 |
hsa-miR-497 |
CLIP-seq |
|
MIRT1374493 |
hsa-miR-503 |
CLIP-seq |
|
MIRT1374495 |
hsa-miR-646 |
CLIP-seq |
|
MIRT1553872 |
hsa-miR-663b |
CLIP-seq |
|
MIRT1553873 |
hsa-miR-676 |
CLIP-seq |
|
MIRT1557071 |
hsa-miR-3185 |
CLIP-seq |
|
MIRT1374472 |
hsa-miR-1179 |
CLIP-seq |
|
MIRT2111443 |
hsa-miR-1206 |
CLIP-seq |
|
MIRT2111444 |
hsa-miR-1208 |
CLIP-seq |
|
MIRT1374473 |
hsa-miR-15a |
CLIP-seq |
|
MIRT1374474 |
hsa-miR-15b |
CLIP-seq |
|
MIRT1374475 |
hsa-miR-16 |
CLIP-seq |
|
MIRT1374476 |
hsa-miR-195 |
CLIP-seq |
|
MIRT1374477 |
hsa-miR-299-5p |
CLIP-seq |
|
MIRT1374478 |
hsa-miR-3121-3p |
CLIP-seq |
|
MIRT2111445 |
hsa-miR-330-3p |
CLIP-seq |
|
MIRT2111446 |
hsa-miR-34b |
CLIP-seq |
|
MIRT1374480 |
hsa-miR-3919 |
CLIP-seq |
|
MIRT1374481 |
hsa-miR-424 |
CLIP-seq |
|
MIRT1374482 |
hsa-miR-4310 |
CLIP-seq |
|
MIRT2111447 |
hsa-miR-4422 |
CLIP-seq |
|
MIRT2111448 |
hsa-miR-4470 |
CLIP-seq |
|
MIRT1374484 |
hsa-miR-4477a |
CLIP-seq |
|
MIRT2111449 |
hsa-miR-4496 |
CLIP-seq |
|
MIRT1374485 |
hsa-miR-4524 |
CLIP-seq |
|
MIRT1374490 |
hsa-miR-4756-3p |
CLIP-seq |
|
MIRT1553871 |
hsa-miR-4757-5p |
CLIP-seq |
|
MIRT2111450 |
hsa-miR-485-3p |
CLIP-seq |
|
MIRT1374491 |
hsa-miR-497 |
CLIP-seq |
|
MIRT1374493 |
hsa-miR-503 |
CLIP-seq |
|
MIRT1374495 |
hsa-miR-646 |
CLIP-seq |
|
MIRT1374496 |
hsa-miR-659 |
CLIP-seq |
|
MIRT1553872 |
hsa-miR-663b |
CLIP-seq |
|
MIRT1553873 |
hsa-miR-676 |
CLIP-seq |
|
MIRT1374497 |
hsa-miR-9 |
CLIP-seq |
|
MIRT1374472 |
hsa-miR-1179 |
CLIP-seq |
|
MIRT2111443 |
hsa-miR-1206 |
CLIP-seq |
|
MIRT2111444 |
hsa-miR-1208 |
CLIP-seq |
|
MIRT2334578 |
hsa-miR-1244 |
CLIP-seq |
|
MIRT2334579 |
hsa-miR-1299 |
CLIP-seq |
|
MIRT2334580 |
hsa-miR-200b |
CLIP-seq |
|
MIRT2334581 |
hsa-miR-200c |
CLIP-seq |
|
MIRT2334582 |
hsa-miR-223 |
CLIP-seq |
|
MIRT2334583 |
hsa-miR-296-3p |
CLIP-seq |
|
MIRT1374478 |
hsa-miR-3121-3p |
CLIP-seq |
|
MIRT2334584 |
hsa-miR-3173-3p |
CLIP-seq |
|
MIRT2111446 |
hsa-miR-34b |
CLIP-seq |
|
MIRT2334585 |
hsa-miR-382 |
CLIP-seq |
|
MIRT2334586 |
hsa-miR-4280 |
CLIP-seq |
|
MIRT2334587 |
hsa-miR-429 |
CLIP-seq |
|
MIRT1374482 |
hsa-miR-4310 |
CLIP-seq |
|
MIRT1374484 |
hsa-miR-4477a |
CLIP-seq |
|
MIRT2111449 |
hsa-miR-4496 |
CLIP-seq |
|
MIRT2334588 |
hsa-miR-4695-5p |
CLIP-seq |
|
MIRT2334589 |
hsa-miR-4697-3p |
CLIP-seq |
|
MIRT2334590 |
hsa-miR-4704-3p |
CLIP-seq |
|
MIRT2334591 |
hsa-miR-4738-3p |
CLIP-seq |
|
MIRT2334592 |
hsa-miR-4766-5p |
CLIP-seq |
|
MIRT2111450 |
hsa-miR-485-3p |
CLIP-seq |
|
MIRT2334593 |
hsa-miR-485-5p |
CLIP-seq |
|
MIRT2334594 |
hsa-miR-488 |
CLIP-seq |
|
MIRT2334595 |
hsa-miR-514 |
CLIP-seq |
|
MIRT2334596 |
hsa-miR-514b-3p |
CLIP-seq |
|
MIRT2334597 |
hsa-miR-549 |
CLIP-seq |
|
MIRT2334598 |
hsa-miR-568 |
CLIP-seq |
|
MIRT2334599 |
hsa-miR-595 |
CLIP-seq |
|
MIRT2334600 |
hsa-miR-618 |
CLIP-seq |
|
MIRT1553873 |
hsa-miR-676 |
CLIP-seq |
|
MIRT2334601 |
hsa-miR-875-3p |
CLIP-seq |
|
MIRT2394895 |
hsa-miR-128 |
CLIP-seq |
|
MIRT2394896 |
hsa-miR-2355-3p |
CLIP-seq |
|
MIRT2394897 |
hsa-miR-27a |
CLIP-seq |
|
MIRT2394898 |
hsa-miR-27b |
CLIP-seq |
|
MIRT1374478 |
hsa-miR-3121-3p |
CLIP-seq |
|
MIRT1374479 |
hsa-miR-3646 |
CLIP-seq |
|
MIRT2394899 |
hsa-miR-3662 |
CLIP-seq |
|
MIRT2394900 |
hsa-miR-3679-3p |
CLIP-seq |
|
MIRT1374486 |
hsa-miR-4698 |
CLIP-seq |
|
MIRT1374487 |
hsa-miR-4719 |
CLIP-seq |
|
MIRT1553873 |
hsa-miR-676 |
CLIP-seq |
|
MIRT2433338 |
hsa-miR-203 |
CLIP-seq |
|
MIRT2334582 |
hsa-miR-223 |
CLIP-seq |
|
MIRT1374478 |
hsa-miR-3121-3p |
CLIP-seq |
|
MIRT2334584 |
hsa-miR-3173-3p |
CLIP-seq |
|
MIRT2334588 |
hsa-miR-4695-5p |
CLIP-seq |
|
MIRT2334589 |
hsa-miR-4697-3p |
CLIP-seq |
|
MIRT2334591 |
hsa-miR-4738-3p |
CLIP-seq |
|
MIRT2334592 |
hsa-miR-4766-5p |
CLIP-seq |
|
MIRT2334593 |
hsa-miR-485-5p |
CLIP-seq |
|
MIRT2334594 |
hsa-miR-488 |
CLIP-seq |
|
MIRT2628595 |
hsa-miR-1253 |
CLIP-seq |
|
MIRT2628596 |
hsa-miR-3163 |
CLIP-seq |
|
MIRT2628597 |
hsa-miR-3194-3p |
CLIP-seq |
|
MIRT2628598 |
hsa-miR-3921 |
CLIP-seq |
|
MIRT2628599 |
hsa-miR-4251 |
CLIP-seq |
|
MIRT2628600 |
hsa-miR-4329 |
CLIP-seq |
|
MIRT2628601 |
hsa-miR-4653-5p |
CLIP-seq |
|
MIRT2628602 |
hsa-miR-4668-3p |
CLIP-seq |
|
MIRT2628603 |
hsa-miR-545 |
CLIP-seq |
|
MIRT2628604 |
hsa-miR-548c-3p |
CLIP-seq |
|
MIRT2628605 |
hsa-miR-548p |
CLIP-seq |
|
MIRT2628606 |
hsa-miR-605 |
CLIP-seq |
|
|
Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
|
GO ID |
Ontology |
Definition |
Evidence |
Reference |
GO:0000122 |
Process |
Negative regulation of transcription by RNA polymerase II |
TAS |
|
GO:0000151 |
Component |
Ubiquitin ligase complex |
IDA |
14755250 |
GO:0000209 |
Process |
Protein polyubiquitination |
IBA |
21873635 |
GO:0000209 |
Process |
Protein polyubiquitination |
TAS |
|
GO:0004842 |
Function |
Ubiquitin-protein transferase activity |
IDA |
14755250 |
GO:0004842 |
Function |
Ubiquitin-protein transferase activity |
TAS |
|
GO:0005160 |
Function |
Transforming growth factor beta receptor binding |
IEA |
|
GO:0005515 |
Function |
Protein binding |
IPI |
14755250, 15231748, 17719543, 18729074, 18985028, 20676133, 20937913, 21572392, 22045334, 22921829, 25438670, 28514442, 30696809, 32296183 |
GO:0005634 |
Component |
Nucleus |
NAS |
11163210 |
GO:0005654 |
Component |
Nucleoplasm |
TAS |
|
GO:0005737 |
Component |
Cytoplasm |
IBA |
21873635 |
GO:0005829 |
Component |
Cytosol |
TAS |
|
GO:0005886 |
Component |
Plasma membrane |
IEA |
|
GO:0006511 |
Process |
Ubiquitin-dependent protein catabolic process |
IDA |
14755250 |
GO:0016567 |
Process |
Protein ubiquitination |
IBA |
21873635 |
GO:0016579 |
Process |
Protein deubiquitination |
TAS |
|
GO:0016607 |
Component |
Nuclear speck |
IDA |
|
GO:0017015 |
Process |
Regulation of transforming growth factor beta receptor signaling pathway |
NAS |
11158580 |
GO:0030509 |
Process |
BMP signaling pathway |
TAS |
|
GO:0030512 |
Process |
Negative regulation of transforming growth factor beta receptor signaling pathway |
IDA |
19255252 |
GO:0030512 |
Process |
Negative regulation of transforming growth factor beta receptor signaling pathway |
TAS |
|
GO:0030514 |
Process |
Negative regulation of BMP signaling pathway |
IBA |
21873635 |
GO:0030579 |
Process |
Ubiquitin-dependent SMAD protein catabolic process |
IBA |
21873635 |
GO:0030579 |
Process |
Ubiquitin-dependent SMAD protein catabolic process |
IDA |
19122240 |
GO:0042802 |
Function |
Identical protein binding |
IPI |
15231748, 17719543 |
GO:0043161 |
Process |
Proteasome-mediated ubiquitin-dependent protein catabolic process |
IBA |
21873635 |
GO:0045121 |
Component |
Membrane raft |
IEA |
|
GO:0045732 |
Process |
Positive regulation of protein catabolic process |
IBA |
21873635 |
GO:0045892 |
Process |
Negative regulation of transcription, DNA-templated |
NAS |
11016919 |
GO:0046332 |
Function |
SMAD binding |
IPI |
19122240 |
GO:0060071 |
Process |
Wnt signaling pathway, planar cell polarity pathway |
TAS |
|
GO:0061630 |
Function |
Ubiquitin protein ligase activity |
IBA |
21873635 |
GO:0061630 |
Function |
Ubiquitin protein ligase activity |
TAS |
|
GO:0090263 |
Process |
Positive regulation of canonical Wnt signaling pathway |
TAS |
|
GO:1901165 |
Process |
Positive regulation of trophoblast cell migration |
IDA |
19255252 |
|
Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
|
|
Protein
|
UniProt ID |
Q9HAU4 |
Protein name |
E3 ubiquitin-protein ligase SMURF2 (hSMURF2) (EC 2.3.2.26) (HECT-type E3 ubiquitin transferase SMURF2) (SMAD ubiquitination regulatory factor 2) (SMAD-specific E3 ubiquitin-protein ligase 2) |
Protein function |
E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates (PubMed:11016919). Interacts with SMAD7 to trigger SMAD7-medi |
PDB |
1ZVD
,
2DJY
,
2JQZ
,
2KXQ
,
2LTZ
,
6FX4
,
7M3Q
|
Family and domains |
Pfam
Accession |
ID |
Position in sequence |
Description |
Type |
PF00168 |
C2 |
12 → 114 |
C2 domain |
Domain |
PF00397 |
WW |
159 → 188 |
WW domain |
Domain |
PF00397 |
WW |
253 → 282 |
WW domain |
Domain |
PF00397 |
WW |
299 → 328 |
WW domain |
Domain |
PF00632 |
HECT |
443 → 748 |
HECT-domain (ubiquitin-transferase) |
Domain |
|
Sequence |
|
Sequence length |
748 |
Interactions |
View interactions |